RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 OBP2AQ9NY56 170 aa11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 PILRAQ9UKJ1 303 aa11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 B3GALT5Q9Y2C3 310 aa11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 VWA8A3KMH1 1905 aa11.14□□□□□ -0.63
SNRNP48-201ENST00000342415 C9orf170A2RU37 121 aa11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 LMX1BO60663 402 aa11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 ZNF217O75362 1048 aa11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 PNPP00491 289 aa11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 DAOP14920 347 aa11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 HTR5AP47898 357 aa11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 FLI1Q01543 452 aaPredicted RBP11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 PLGLB1Q02325 96 aa11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 RAB32Q13637 225 aa11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 PCK2Q16822 640 aa11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 MOGAT2Q3SYC2 334 aa11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 MAGT1Q9H0U3 335 aa11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 FN3KRPQ9HA64 309 aa11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 RHOFQ9HBH0 211 aa11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 CHST11Q9NPF2 352 aa11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 LRFN1Q9P244 771 aa11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 KLF15Q9UIH9 416 aa11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 GDF2Q9UK05 429 aaPredicted RBP11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 TRIM77I1YAP6 450 aa11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 CTDSPLO15194 276 aa11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 CD79AP11912 226 aa11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 RPL12P30050 165 aaKnown RBP11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 GPR85P60893 370 aa11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 ZNF141Q15928 474 aa11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 HS3ST3A1Q9Y663 406 aa11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 BLACEA4D250 179 aa11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 TXNDC12O95881 172 aa11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 ZNF728P0DKX0 622 aa11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 ZNF660Q6AZW8 331 aaPredicted RBP11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 ATG4DQ86TL0 474 aaPredicted RBP11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 ADAD2Q8NCV1 583 aaKnown RBP11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 LHFPL5Q8TAF8 219 aa11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 ASB5Q8WWX0 329 aa11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 TTC9Q92623 222 aa11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 ZCCHC4Q9H5U6 513 aa11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 MRPS18BQ9Y676 258 aaKnown RBP11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 PLSCR5A0PG75 271 aa11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 HMSDA8MTL9 139 aa11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 H3BMH7 237 aa11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 SULT1C2O00338 296 aa11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 SERPINE2P07093 398 aa11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 TMEM182Q6ZP80 229 aaPredicted RBP11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 OR1S1Q8NH92 325 aa11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 ISOC2Q96AB3 205 aa11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 MRPL38Q96DV4 380 aaKnown RBP11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 NAA11Q9BSU3 229 aaPredicted RBP11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 SMCO4Q9NRQ5 59 aa11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 WIF1Q9Y5W5 379 aa11.13□□□□□ -0.63
SNRNP48-201ENST00000342415 OR2J2O76002 312 aa11.12□□□□□ -0.63
SNRNP48-201ENST00000342415 NDUFA6P56556 154 aa11.12□□□□□ -0.63
SNRNP48-201ENST00000342415 SNRPEP62304 92 aaKnown RBP11.12□□□□□ -0.63
SNRNP48-201ENST00000342415 RPS4XP62701 263 aaKnown RBP11.12□□□□□ -0.63
SNRNP48-201ENST00000342415 MALLQ13021 153 aa11.12□□□□□ -0.63
SNRNP48-201ENST00000342415 RIN1Q13671 783 aa11.12□□□□□ -0.63
SNRNP48-201ENST00000342415 HAGHQ16775 308 aa11.12□□□□□ -0.63
SNRNP48-201ENST00000342415 NKAIN1Q4KMZ8 207 aa11.12□□□□□ -0.63
SNRNP48-201ENST00000342415 MRGPREQ86SM8 312 aa11.12□□□□□ -0.63
SNRNP48-201ENST00000342415 RRNAD1Q96FB5 475 aaKnown RBP11.12□□□□□ -0.63
SNRNP48-201ENST00000342415 FAM86C1Q9NVL1 165 aa11.12□□□□□ -0.63
SNRNP48-201ENST00000342415 MMACHCQ9Y4U1 282 aa11.12□□□□□ -0.63
SNRNP48-201ENST00000342415 TMEM184BQ9Y519 407 aaPredicted RBP11.12□□□□□ -0.63
SNRNP48-201ENST00000342415 A0A1W2PP11 408 aa11.12□□□□□ -0.63
SNRNP48-201ENST00000342415 OR6C76A6NM76 312 aa11.12□□□□□ -0.63
SNRNP48-201ENST00000342415 SOCS1O15524 211 aa11.12□□□□□ -0.63
SNRNP48-201ENST00000342415 KIR3DL2P43630 455 aa11.12□□□□□ -0.63
SNRNP48-201ENST00000342415 FASLGP48023 281 aa11.12□□□□□ -0.63
SNRNP48-201ENST00000342415 UBE2KP61086 200 aa11.12□□□□□ -0.63
SNRNP48-201ENST00000342415 CDC20BQ86Y33 519 aa11.12□□□□□ -0.63
SNRNP48-201ENST00000342415 OR5M8Q8NGP6 311 aa11.12□□□□□ -0.63
SNRNP48-201ENST00000342415 LIN37Q96GY3 246 aaPredicted RBP11.12□□□□□ -0.63
SNRNP48-201ENST00000342415 FOXQ1Q9C009 403 aa11.12□□□□□ -0.63
SNRNP48-201ENST00000342415 ZNF576Q9H609 170 aa11.12□□□□□ -0.63
SNRNP48-201ENST00000342415 DOCK8Q8NF50 2099 aa11.12□□□□□ -0.63
SNRNP48-201ENST00000342415 A0A1B0GX78 115 aa11.12□□□□□ -0.63
SNRNP48-201ENST00000342415 KLF4O43474 513 aa11.12□□□□□ -0.63
SNRNP48-201ENST00000342415 DDAH2O95865 285 aa11.12□□□□□ -0.63
SNRNP48-201ENST00000342415 IFNA2P01563 188 aa11.12□□□□□ -0.63
SNRNP48-201ENST00000342415 ALDH3B1P43353 468 aa11.12□□□□□ -0.63
SNRNP48-201ENST00000342415 OR3A4PP47883 348 aa11.12□□□□□ -0.63
SNRNP48-201ENST00000342415 TLE1Q04724 770 aa11.12□□□□□ -0.63
SNRNP48-201ENST00000342415 RIPPLY1Q0D2K3 151 aa11.12□□□□□ -0.63
SNRNP48-201ENST00000342415 FZD2Q14332 565 aa11.12□□□□□ -0.63
SNRNP48-201ENST00000342415 TMEM128Q5BJH2 165 aa11.12□□□□□ -0.63
SNRNP48-201ENST00000342415 NAA40Q86UY6 237 aa11.12□□□□□ -0.63
SNRNP48-201ENST00000342415 NAXDQ8IW45 347 aa11.12□□□□□ -0.63
SNRNP48-201ENST00000342415 PAPOLGQ9BWT3 736 aaKnown RBP11.12□□□□□ -0.63
SNRNP48-201ENST00000342415 METTL9Q9H1A3 318 aa11.12□□□□□ -0.63
SNRNP48-201ENST00000342415 MMP17Q9ULZ9 603 aa11.12□□□□□ -0.63
SNRNP48-201ENST00000342415 A0A0U1RQK1 487 aa11.11□□□□□ -0.63
SNRNP48-201ENST00000342415 SPRY1O43609 319 aaPredicted RBP11.11□□□□□ -0.63
SNRNP48-201ENST00000342415 AQP8O94778 261 aa11.11□□□□□ -0.63
SNRNP48-201ENST00000342415 KIR2DL1P43626 348 aaPredicted RBP11.11□□□□□ -0.63
SNRNP48-201ENST00000342415 MRPS34P82930 218 aaKnown RBP11.11□□□□□ -0.63
SNRNP48-201ENST00000342415 LILRB2Q8N423 598 aa11.11□□□□□ -0.63
SNRNP48-201ENST00000342415 ROBO4Q8WZ75 1007 aa11.11□□□□□ -0.63
SNRNP48-201ENST00000342415 DOCK9Q9BZ29 2069 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms