RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 ZAR1LA6NP61 321 aa12.28□□□□□ -0.44
ERCC1-203ENST00000340192 GMDSO60547 372 aa12.28□□□□□ -0.44
ERCC1-203ENST00000340192 ZNF205O95201 554 aa12.28□□□□□ -0.44
ERCC1-203ENST00000340192 PNPP00491 289 aa12.28□□□□□ -0.44
ERCC1-203ENST00000340192 THBS2P35442 1172 aa12.28□□□□□ -0.44
ERCC1-203ENST00000340192 MDH2P40926 338 aaKnown RBP12.28□□□□□ -0.44
ERCC1-203ENST00000340192 PMELP40967 661 aa12.28□□□□□ -0.44
ERCC1-203ENST00000340192 CD200P41217 278 aa12.28□□□□□ -0.44
ERCC1-203ENST00000340192 GATA4P43694 442 aa12.28□□□□□ -0.44
ERCC1-203ENST00000340192 HCCSP53701 268 aa12.28□□□□□ -0.44
ERCC1-203ENST00000340192 LCN2P80188 198 aa12.28□□□□□ -0.44
ERCC1-203ENST00000340192 TIGD6Q17RP2 521 aa12.28□□□□□ -0.44
ERCC1-203ENST00000340192 ZNF181Q2M3W8 571 aa12.28□□□□□ -0.44
ERCC1-203ENST00000340192 SLX4IPQ5VYV7 408 aa12.28□□□□□ -0.44
ERCC1-203ENST00000340192 FAM57BQ71RH2 274 aa12.28□□□□□ -0.44
ERCC1-203ENST00000340192 SLC16A9Q7RTY1 509 aa12.28□□□□□ -0.44
ERCC1-203ENST00000340192 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.28□□□□□ -0.44
ERCC1-203ENST00000340192 OR56B2PQ8NGI1 322 aa12.28□□□□□ -0.44
ERCC1-203ENST00000340192 OR52H1Q8NGJ2 320 aa12.28□□□□□ -0.44
ERCC1-203ENST00000340192 PYDC1Q8WXC3 89 aa12.28□□□□□ -0.44
ERCC1-203ENST00000340192 DVL3Q92997 716 aaPredicted RBP12.28□□□□□ -0.44
ERCC1-203ENST00000340192 SGK3Q96BR1 496 aa12.28□□□□□ -0.44
ERCC1-203ENST00000340192 CENPNQ96H22 339 aaPredicted RBP12.28□□□□□ -0.44
ERCC1-203ENST00000340192 REEP6Q96HR9 211 aa12.28□□□□□ -0.44
ERCC1-203ENST00000340192 TEAD3Q99594 435 aa12.28□□□□□ -0.44
ERCC1-203ENST00000340192 CIB1Q99828 191 aa12.28□□□□□ -0.44
ERCC1-203ENST00000340192 BRD7Q9NPI1 651 aa12.28□□□□□ -0.44
ERCC1-203ENST00000340192 LAMP5Q9UJQ1 280 aa12.28□□□□□ -0.44
ERCC1-203ENST00000340192 OAZ3Q9UMX2 235 aa12.28□□□□□ -0.44
ERCC1-203ENST00000340192 NOP16Q9Y3C1 178 aaKnown RBP12.28□□□□□ -0.44
ERCC1-203ENST00000340192 A0A0G2JMP0 313 aa12.27□□□□□ -0.45
ERCC1-203ENST00000340192 A0A0X1KG70 313 aa12.27□□□□□ -0.45
ERCC1-203ENST00000340192 PHF1O43189 567 aaPredicted RBP12.27□□□□□ -0.45
ERCC1-203ENST00000340192 MRPL3P09001 348 aaKnown RBP12.27□□□□□ -0.45
ERCC1-203ENST00000340192 ALOX5APP20292 161 aa12.27□□□□□ -0.45
ERCC1-203ENST00000340192 FAM3AP98173 230 aa12.27□□□□□ -0.45
ERCC1-203ENST00000340192 KPNB1Q14974 876 aaKnown RBP12.27□□□□□ -0.45
ERCC1-203ENST00000340192 GFOD2Q3B7J2 385 aa12.27□□□□□ -0.45
ERCC1-203ENST00000340192 LCN1P1Q5VSP4 162 aa12.27□□□□□ -0.45
ERCC1-203ENST00000340192 PRAMEF6Q5VXH4 476 aa12.27□□□□□ -0.45
ERCC1-203ENST00000340192 C12orf73Q69YU5 71 aa12.27□□□□□ -0.45
ERCC1-203ENST00000340192 LRRN1Q6UXK5 716 aa12.27□□□□□ -0.45
ERCC1-203ENST00000340192 BCDIN3DQ7Z5W3 292 aaKnown RBP12.27□□□□□ -0.45
ERCC1-203ENST00000340192 MUC20Q8N307 709 aaPredicted RBP12.27□□□□□ -0.45
ERCC1-203ENST00000340192 OR4M2Q8NGB6 313 aa12.27□□□□□ -0.45
ERCC1-203ENST00000340192 YIPF3Q9GZM5 350 aa12.27□□□□□ -0.45
ERCC1-203ENST00000340192 OR10A2Q9H208 303 aa12.27□□□□□ -0.45
ERCC1-203ENST00000340192 PATZ1Q9HBE1 687 aaKnown RBP12.27□□□□□ -0.45
ERCC1-203ENST00000340192 UFSP2Q9NUQ7 469 aa12.27□□□□□ -0.45
ERCC1-203ENST00000340192 ZNF319Q9P2F9 582 aa12.27□□□□□ -0.45
ERCC1-203ENST00000340192 ENOPH1Q9UHY7 261 aa12.27□□□□□ -0.45
ERCC1-203ENST00000340192 COL6A5A8TX70 2615 aa12.26□□□□□ -0.45
ERCC1-203ENST00000340192 SAC3D1A6NKF1 404 aa12.26□□□□□ -0.45
ERCC1-203ENST00000340192 F5H0A9 414 aaPredicted RBP12.26□□□□□ -0.45
ERCC1-203ENST00000340192 ZFP36P26651 326 aaKnown RBP12.26□□□□□ -0.45
ERCC1-203ENST00000340192 DDOSTP39656 456 aa12.26□□□□□ -0.45
ERCC1-203ENST00000340192 ACTR3P61158 418 aa12.26□□□□□ -0.45
ERCC1-203ENST00000340192 SEC61A1P61619 476 aaKnown RBP12.26□□□□□ -0.45
ERCC1-203ENST00000340192 EFNB1P98172 346 aa12.26□□□□□ -0.45
ERCC1-203ENST00000340192 MPPED2Q15777 294 aa12.26□□□□□ -0.45
ERCC1-203ENST00000340192 DCAF12L2Q5VW00 463 aa12.26□□□□□ -0.45
ERCC1-203ENST00000340192 C1orf229Q6ZS94 237 aaPredicted RBP12.26□□□□□ -0.45
ERCC1-203ENST00000340192 KRT77Q7Z794 578 aa12.26□□□□□ -0.45
ERCC1-203ENST00000340192 KLBQ86Z14 1044 aa12.26□□□□□ -0.45
ERCC1-203ENST00000340192 C1orf87Q8N0U7 546 aa12.26□□□□□ -0.45
ERCC1-203ENST00000340192 TCEANCQ8N8B7 351 aa12.26□□□□□ -0.45
ERCC1-203ENST00000340192 TMEM163Q8TC26 289 aa12.26□□□□□ -0.45
ERCC1-203ENST00000340192 Q8TCH9 128 aa12.26□□□□□ -0.45
ERCC1-203ENST00000340192 ERGIC1Q969X5 290 aa12.26□□□□□ -0.45
ERCC1-203ENST00000340192 PGAM5Q96HS1 289 aa12.26□□□□□ -0.45
ERCC1-203ENST00000340192 TMPRSS13Q9BYE2 586 aa12.26□□□□□ -0.45
ERCC1-203ENST00000340192 TMEM165Q9HC07 324 aa12.26□□□□□ -0.45
ERCC1-203ENST00000340192 LRP12Q9Y561 859 aa12.26□□□□□ -0.45
ERCC1-203ENST00000340192 hCG_38984A0A1B0GV85 526 aa12.25□□□□□ -0.45
ERCC1-203ENST00000340192 ANKRD30BLA7E2S9 258 aa12.25□□□□□ -0.45
ERCC1-203ENST00000340192 CEACAM18A8MTB9 384 aa12.25□□□□□ -0.45
ERCC1-203ENST00000340192 FAM20BO75063 409 aa12.25□□□□□ -0.45
ERCC1-203ENST00000340192 FOXH1O75593 365 aa12.25□□□□□ -0.45
ERCC1-203ENST00000340192 AVPP01185 164 aa12.25□□□□□ -0.45
ERCC1-203ENST00000340192 IRF2P14316 349 aa12.25□□□□□ -0.45
ERCC1-203ENST00000340192 CFL1P23528 166 aaKnown RBP12.25□□□□□ -0.45
ERCC1-203ENST00000340192 POLR2IP36954 125 aaKnown RBP12.25□□□□□ -0.45
ERCC1-203ENST00000340192 GSK3AP49840 483 aa12.25□□□□□ -0.45
ERCC1-203ENST00000340192 PSMA6P60900 246 aaKnown RBP12.25□□□□□ -0.45
ERCC1-203ENST00000340192 FAM201AQ5SY85 155 aa12.25□□□□□ -0.45
ERCC1-203ENST00000340192 NXNL2Q5VZ03 156 aa12.25□□□□□ -0.45
ERCC1-203ENST00000340192 MEPCEQ7L2J0 689 aaKnown RBP12.25□□□□□ -0.45
ERCC1-203ENST00000340192 OR11L1Q8NGX0 322 aa12.25□□□□□ -0.45
ERCC1-203ENST00000340192 IL4I1Q96RQ9 567 aa12.25□□□□□ -0.45
ERCC1-203ENST00000340192 CNN2Q99439 309 aaKnown RBP12.25□□□□□ -0.45
ERCC1-203ENST00000340192 PKP2Q99959 881 aa12.25□□□□□ -0.45
ERCC1-203ENST00000340192 TMEM246Q9BRR3 403 aa12.25□□□□□ -0.45
ERCC1-203ENST00000340192 OSBPL10Q9BXB5 764 aa12.25□□□□□ -0.45
ERCC1-203ENST00000340192 RGCCQ9H4X1 137 aa12.25□□□□□ -0.45
ERCC1-203ENST00000340192 METTL17Q9H7H0 456 aaPredicted RBP12.25□□□□□ -0.45
ERCC1-203ENST00000340192 NIPAL2Q9H841 368 aa12.25□□□□□ -0.45
ERCC1-203ENST00000340192 FN3KRPQ9HA64 309 aa12.25□□□□□ -0.45
ERCC1-203ENST00000340192 H2AFY2Q9P0M6 372 aaPredicted RBP12.25□□□□□ -0.45
ERCC1-203ENST00000340192 DNHD1Q96M86 4753 aa12.25□□□□□ -0.45
ERCC1-203ENST00000340192 WNK2Q9Y3S1 2297 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms