RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 RPP30P78346 268 aaKnown RBP7.87□□□□□ -1.15
RTN3-202ENST00000339997 FMODQ06828 376 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 PRSS41Q7RTY9 318 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 TIPARPQ7Z3E1 657 aaKnown RBP7.87□□□□□ -1.15
RTN3-202ENST00000339997 OR2W3Q7Z3T1 314 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 BTF3L4Q96K17 158 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 LYSMD1Q96S90 227 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 SMIM7Q9BQ49 75 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 GREB1LQ9C091 1923 aaPredicted RBP7.87□□□□□ -1.15
RTN3-202ENST00000339997 MTCH1Q9NZJ7 389 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 SLCO1B1Q9Y6L6 691 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 A0A1B0GUH1 482 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 SLC31A2O15432 143 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 ZNF749O43361 778 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 KLK8O60259 260 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 FABP1P07148 127 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 FAHP16930 419 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 RPL29P47914 159 aaKnown RBP7.87□□□□□ -1.15
RTN3-202ENST00000339997 VAMP3Q15836 100 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 FAM209AQ5JX71 171 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 GTF2H5Q6ZYL4 71 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 NAXDQ8IW45 347 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 GALNT16Q8N428 558 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 COMMD1Q8N668 190 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 BCORP1Q8N888 145 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 OR2A1Q8NGT9 310 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 RTN4IP1Q8WWV3 396 aaPredicted RBP7.87□□□□□ -1.15
RTN3-202ENST00000339997 PELI1Q96FA3 418 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 THOC3Q96J01 351 aaKnown RBP7.87□□□□□ -1.15
RTN3-202ENST00000339997 SLC6A18Q96N87 628 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 C19orf53Q9UNZ5 99 aaPredicted RBP7.87□□□□□ -1.15
RTN3-202ENST00000339997 ARHGEF17Q96PE2 2063 aaPredicted RBP7.86□□□□□ -1.15
RTN3-202ENST00000339997 LANCL1O43813 399 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 ICOSLGO75144 302 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 JTBO76095 146 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 FOLR3P41439 243 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 SLC10A1Q14973 349 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 MIDNQ504T8 468 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 H1FNTQ75WM6 255 aaPredicted RBP7.86□□□□□ -1.15
RTN3-202ENST00000339997 TRILQ7L0X0 811 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 AKR7LQ8NHP1 331 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 NANOS1Q8WY41 292 aaKnown RBP7.86□□□□□ -1.15
RTN3-202ENST00000339997 NGBQ9NPG2 151 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 GAR1Q9NY12 217 aaKnown RBP7.86□□□□□ -1.15
RTN3-202ENST00000339997 FER1L6Q2WGJ9 1857 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 LOC102725191A0A1B0GVB3 256 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 FAM166BA8MTA8 275 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 IGLV3-25P01717 112 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 CTSLP07711 333 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 MMP7P09237 267 aaPredicted RBP7.86□□□□□ -1.15
RTN3-202ENST00000339997 RBPJQ06330 500 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 C17orf67Q0P5P2 114 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 ARIH2OSQ8N7S6 290 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 TCTN2Q96GX1 697 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 BARHL1Q9BZE3 327 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 FAM117AQ9C073 453 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 MOB1AQ9H8S9 216 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 ISYNA1Q9NPH2 558 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 DUSP22Q9NRW4 184 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 RYDENQ9NUL5 291 aaKnown RBP7.86□□□□□ -1.15
RTN3-202ENST00000339997 NTMQ9P121 344 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 NOSIPQ9Y314 301 aaKnown RBP7.86□□□□□ -1.15
RTN3-202ENST00000339997 INTS1Q8N201 2190 aaKnown RBP7.86□□□□□ -1.15
RTN3-202ENST00000339997 hCG_1809904A0A1W2PP81 198 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 A0A1W2PR64 198 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 A0A1W2PRV1 198 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 GJE1A6NN92 205 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 RNASEK-C17orf49H0YIS7 233 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 TGOLN2O43493 480 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 OR10J4P0C629 311 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 MGMTP16455 207 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 GLRA1P23415 457 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 DVL1P1P54792 670 aaPredicted RBP7.86□□□□□ -1.15
RTN3-202ENST00000339997 ZNF90Q03938 601 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 CLLU1Q5K131 121 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 CALHM3Q86XJ0 350 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 OR4A16Q8NH70 328 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 FAM122AQ96E09 287 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 DYNLRB1Q9NP97 96 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 NECAP2Q9NVZ3 263 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 SAGE1Q9NXZ1 904 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 ZNF587BE7ETH6 402 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 IGHV3-13P01766 116 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 IGHV3-7P01780 117 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 CCR2P41597 374 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 HSF1Q00613 529 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 ZNF92Q03936 586 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 PPP1R1AQ13522 171 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 Q7L0L9 218 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 GOT1L1Q8NHS2 421 aaPredicted RBP7.86□□□□□ -1.15
RTN3-202ENST00000339997 JAM3Q9BX67 310 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 TOLLIPQ9H0E2 274 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 B9D1Q9UPM9 204 aa7.86□□□□□ -1.15
RTN3-202ENST00000339997 SCN2AQ99250 2005 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 ZNF320A2RRD8 509 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 SIRPB1O00241 398 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 TIMP1P01033 207 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 GFERP55789 205 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 DHRS2Q13268 280 aa7.85□□□□□ -1.15
RTN3-202ENST00000339997 MLF2Q15773 248 aaPredicted RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms