RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 HIST1H3AP68431 136 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 UBE2V2Q15819 145 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 SLC22A6Q4U2R8 563 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 HIST2H3PS2Q5TEC6 136 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 HIST2H3AQ71DI3 136 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 ZFP62Q8NB50 900 aaPredicted RBP6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 OR5D14Q8NGL3 314 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 OR14K1Q8NGZ2 314 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 OR8S1Q8NH09 359 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 FCAMRQ8WWV6 532 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 SGK3Q96BR1 496 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 IP6K3Q96PC2 410 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 NICN1Q9BSH3 213 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 LDAHQ9H6V9 325 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 C12orf49Q9H741 205 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 MCUBQ9NWR8 336 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 PAQR5Q9NXK6 330 aaPredicted RBP6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 B4GALT7Q9UBV7 327 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 ETV7Q9Y603 341 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 IGF2RP11717 2491 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 TMEM235A6NFC5 223 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 LDLRAD4O15165 306 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 CTDSPLO15194 276 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 DNPH1O43598 174 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 KRT33AO76009 404 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 LIPCP11150 499 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 CD46P15529 392 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 OTX1P32242 354 aaPredicted RBP6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 SOX8P57073 446 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 TNK1Q13470 666 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 KCNJ8Q15842 424 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 OLFML2AQ68BL7 652 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 ZNF529Q6P280 563 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 RHOUQ7L0Q8 258 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 CMTM3Q96MX0 182 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 PRRG4Q9BZD6 226 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 BANF2Q9H503 90 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 EXO5Q9H790 373 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 NIPAL2Q9H841 368 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 TMEM138Q9NPI0 162 aa6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 CDV3Q9UKY7 258 aaKnown RBP6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 KLF13Q9Y2Y9 288 aaPredicted RBP6.47□□□□□ -1.37
SRFBP1-201ENST00000339397 LOC390937A0A1W2PQ73 354 aa6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 ZNF587BE7ETH6 402 aa6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 HLA-HP01893 362 aa6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 VSIG8P0DPA2 414 aa6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 ZNF20P17024 532 aa6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 RAB3AP20336 220 aa6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 CRYGSP22914 178 aa6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 CTSSP25774 331 aa6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 ZNF93P35789 620 aaPredicted RBP6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 NBL1P41271 181 aa6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 GRB2P62993 217 aaKnown RBP6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 PMPCAQ10713 525 aa6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 CLN3Q13286 438 aa6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 C1orf100Q5SVJ3 147 aa6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 SLC16A14Q7RTX9 510 aa6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 OR6M1Q8NGM8 313 aa6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 OR10K1Q8NGX5 313 aa6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 CPT1CQ8TCG5 803 aa6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 WNT5BQ9H1J7 359 aa6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 OR10A4Q9H209 315 aa6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 NOX3Q9HBY0 568 aa6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 SLC17A5Q9NRA2 495 aa6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 GTF3C1Q12789 2109 aa6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 K7EM74 188 aa6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 HPXP02790 462 aa6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 CCNOP22674 350 aa6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 CFPP27918 469 aa6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 QRFPP83859 136 aa6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 ARF1P84077 181 aaKnown RBP6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 FAPQ12884 760 aa6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 CBX3Q13185 183 aa6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 PCGF3Q3KNV8 242 aa6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 LINC00303Q3SY05 128 aa6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 AWAT2Q6E213 333 aa6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 GCNT2Q8N0V5 402 aa6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 GVQW1Q8N7I0 195 aa6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 NAXEQ8NCW5 288 aa6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 OR4S1Q8NGB4 309 aa6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 PIGTQ969N2 578 aa6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 PNPLA2Q96AD5 504 aa6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 INTS12Q96CB8 462 aaKnown RBP6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 WDYHV1Q96HA8 205 aa6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 C1orf147Q96MC9 270 aaPredicted RBP6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 PRSS50Q9UI38 385 aa6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 PIGLQ9Y2B2 252 aa6.46□□□□□ -1.38
SRFBP1-201ENST00000339397 A0A0A6YYD4 124 aa6.45□□□□□ -1.38
SRFBP1-201ENST00000339397 ANKRD20A5PA0PJZ0 165 aa6.45□□□□□ -1.38
SRFBP1-201ENST00000339397 HMX3A6NHT5 357 aa6.45□□□□□ -1.38
SRFBP1-201ENST00000339397 RAB27BO00194 218 aa6.45□□□□□ -1.38
SRFBP1-201ENST00000339397 SULT1B1O43704 296 aa6.45□□□□□ -1.38
SRFBP1-201ENST00000339397 IGLV3-1P01715 115 aa6.45□□□□□ -1.38
SRFBP1-201ENST00000339397 LCATP04180 440 aa6.45□□□□□ -1.38
SRFBP1-201ENST00000339397 CD3DP04234 171 aa6.45□□□□□ -1.38
SRFBP1-201ENST00000339397 HCKP08631 526 aa6.45□□□□□ -1.38
SRFBP1-201ENST00000339397 CEACAM1P13688 526 aa6.45□□□□□ -1.38
SRFBP1-201ENST00000339397 GNB3P16520 340 aa6.45□□□□□ -1.38
SRFBP1-201ENST00000339397 CXCL3P19876 107 aa6.45□□□□□ -1.38
SRFBP1-201ENST00000339397 HTR5AP47898 357 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms