RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 FRKP42685 505 aaPredicted RBP3.74□□□□□ -1.81
NEDD4-201ENST00000338963 PRLHRP49683 370 aa3.74□□□□□ -1.81
NEDD4-201ENST00000338963 CNN1P51911 297 aaKnown RBP3.74□□□□□ -1.81
NEDD4-201ENST00000338963 Q499Y3 187 aa3.74□□□□□ -1.81
NEDD4-201ENST00000338963 DCAF8Q5TAQ9 597 aa3.74□□□□□ -1.81
NEDD4-201ENST00000338963 RAET1LQ5VY80 246 aa3.74□□□□□ -1.81
NEDD4-201ENST00000338963 DNM1P46Q6ZS02 220 aa3.74□□□□□ -1.81
NEDD4-201ENST00000338963 RPS27LQ71UM5 84 aaKnown RBP3.74□□□□□ -1.81
NEDD4-201ENST00000338963 ZFP41Q8N8Y5 198 aa3.74□□□□□ -1.81
NEDD4-201ENST00000338963 MRPL43Q8N983 215 aaKnown RBP3.74□□□□□ -1.81
NEDD4-201ENST00000338963 OR10H4Q8NGA5 316 aa3.74□□□□□ -1.81
NEDD4-201ENST00000338963 THOC3Q96J01 351 aaKnown RBP3.74□□□□□ -1.81
NEDD4-201ENST00000338963 PYGO2Q9BRQ0 406 aa3.74□□□□□ -1.81
NEDD4-201ENST00000338963 SLC32A1Q9H598 525 aa3.74□□□□□ -1.81
NEDD4-201ENST00000338963 A0A0A6YYC8 382 aaPredicted RBP3.74□□□□□ -1.81
NEDD4-201ENST00000338963 TSPAN11A1L157 253 aa3.74□□□□□ -1.81
NEDD4-201ENST00000338963 C17orf105B2RV13 164 aa3.74□□□□□ -1.81
NEDD4-201ENST00000338963 I3L1I5 382 aaPredicted RBP3.74□□□□□ -1.81
NEDD4-201ENST00000338963 GEMIN2O14893 280 aaKnown RBP3.74□□□□□ -1.81
NEDD4-201ENST00000338963 VAMP5O95183 116 aa3.74□□□□□ -1.81
NEDD4-201ENST00000338963 CDS2O95674 445 aa3.74□□□□□ -1.81
NEDD4-201ENST00000338963 FAHP16930 419 aa3.74□□□□□ -1.81
NEDD4-201ENST00000338963 EN2P19622 333 aaPredicted RBP3.74□□□□□ -1.81
NEDD4-201ENST00000338963 OR1D2P34982 312 aa3.74□□□□□ -1.81
NEDD4-201ENST00000338963 YBEYP58557 167 aaPredicted RBP3.74□□□□□ -1.81
NEDD4-201ENST00000338963 HLA-BQ31612 363 aa3.74□□□□□ -1.81
NEDD4-201ENST00000338963 PLCXD3Q63HM9 321 aa3.74□□□□□ -1.81
NEDD4-201ENST00000338963 C19orf35Q6ZS72 473 aa3.74□□□□□ -1.81
NEDD4-201ENST00000338963 C5orf24Q7Z6I8 188 aa3.74□□□□□ -1.81
NEDD4-201ENST00000338963 RBM45Q8IUH3 476 aaKnown RBP3.74□□□□□ -1.81
NEDD4-201ENST00000338963 D2HGDHQ8N465 521 aa3.74□□□□□ -1.81
NEDD4-201ENST00000338963 NFKBIDQ8NI38 313 aa3.74□□□□□ -1.81
NEDD4-201ENST00000338963 RAB1CQ92928 201 aa3.74□□□□□ -1.81
NEDD4-201ENST00000338963 UBE2E3Q969T4 207 aa3.74□□□□□ -1.81
NEDD4-201ENST00000338963 LMLNQ96KR4 655 aa3.74□□□□□ -1.81
NEDD4-201ENST00000338963 POM121L2Q96KW2 1035 aa3.74□□□□□ -1.81
NEDD4-201ENST00000338963 GPR174Q9BXC1 333 aa3.74□□□□□ -1.81
NEDD4-201ENST00000338963 SAMD10Q9BYL1 202 aa3.74□□□□□ -1.81
NEDD4-201ENST00000338963 FBXW11Q9UKB1 542 aa3.74□□□□□ -1.81
NEDD4-201ENST00000338963 MRPS33Q9Y291 106 aaKnown RBP3.74□□□□□ -1.81
NEDD4-201ENST00000338963 M0R129 80 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 MMP2P08253 660 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 PNPLA4P41247 253 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 RPL34P49207 117 aaKnown RBP3.73□□□□□ -1.81
NEDD4-201ENST00000338963 ODF1Q14990 250 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 SGPP2Q8IWX5 399 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 KRTCAP2Q8N6L1 136 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 OR5AU1Q8NGC0 362 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 GPR146Q96CH1 333 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 TIMM29Q9BSF4 260 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 AHSPQ9NZD4 102 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 TRAV38-1A0A0B4J264 116 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 DUXBA0A1W2PPF3 345 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 GAGE10A6NGK3 116 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 FAM227AF5H4B4 570 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 AGRPO00253 132 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 NDUFV2P19404 249 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 PLP1P60201 277 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 CSNK2A1P68400 391 aaPredicted RBP3.73□□□□□ -1.81
NEDD4-201ENST00000338963 MELKQ14680 651 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 MTMR14Q8NCE2 650 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 CSNK2A3Q8NEV1 391 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 OR4N2Q8NGD1 307 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 OR52R1Q8NGF1 315 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 SMPDL3BQ92485 455 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 NUDT9Q9BW91 350 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 PIGVQ9NUD9 493 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 ADAMTSL3P82987 1691 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 VSTM2BA6NLU5 285 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 ZBTB42B2RXF5 422 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 E5RGE8 158 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 C1QTNF3-AMACRE9PGA6 284 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 LATO43561 262 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 SOX14O95416 240 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 HRASP01112 189 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 OR4A8P0C604 315 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 SERPINA4P29622 427 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 DCAF7P61962 342 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 COL10A1Q03692 680 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 TMEM267Q0VDI3 215 aaPredicted RBP3.73□□□□□ -1.81
NEDD4-201ENST00000338963 MSMO1Q15800 293 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 SLC25A35Q3KQZ1 300 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 PARS2Q7L3T8 475 aaKnown RBP3.73□□□□□ -1.81
NEDD4-201ENST00000338963 CYB561A3Q8NBI2 242 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 OR2Y1Q8NGV0 311 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 ESAMQ96AP7 390 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 SLC46A1Q96NT5 459 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 DUSP23Q9BVJ7 150 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 SPANXDQ9BXN6 97 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 FZD8Q9H461 694 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 CKLFQ9UBR5 152 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 FZD1Q9UP38 647 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 NSG2Q9Y328 171 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 LOC100289279A0A1B0GTE1 492 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 OR6C6A6NF89 314 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 IRAK2O43187 625 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 SFT2D2O95562 160 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 EDNRAP25101 427 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 TBPL1P62380 186 aa3.73□□□□□ -1.81
NEDD4-201ENST00000338963 LTBQ06643 244 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms