RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 A0A0G2JNG1 304 aa12.63□□□□□ -0.39
PCDH8-201ENST00000338862 hCG_1809904A0A1W2PP81 198 aa12.63□□□□□ -0.39
PCDH8-201ENST00000338862 A0A1W2PR64 198 aa12.63□□□□□ -0.39
PCDH8-201ENST00000338862 A0A1W2PRV1 198 aa12.63□□□□□ -0.39
PCDH8-201ENST00000338862 A8MVM7 634 aa12.63□□□□□ -0.39
PCDH8-201ENST00000338862 KIR2DS3K7RE56 304 aa12.63□□□□□ -0.39
PCDH8-201ENST00000338862 SNAPC5O75971 98 aa12.63□□□□□ -0.39
PCDH8-201ENST00000338862 TPPPO94811 219 aa12.63□□□□□ -0.39
PCDH8-201ENST00000338862 ABHD16AO95870 558 aa12.63□□□□□ -0.39
PCDH8-201ENST00000338862 APOC1P02654 83 aa12.63□□□□□ -0.39
PCDH8-201ENST00000338862 KIR2DS5Q14953 304 aa12.63□□□□□ -0.39
PCDH8-201ENST00000338862 Q6ZS52 159 aa12.63□□□□□ -0.39
PCDH8-201ENST00000338862 ZCCHC4Q9H5U6 513 aa12.63□□□□□ -0.39
PCDH8-201ENST00000338862 NDRG3Q9UGV2 375 aa12.63□□□□□ -0.39
PCDH8-201ENST00000338862 A0A1W2PQF6 199 aa12.62□□□□□ -0.39
PCDH8-201ENST00000338862 VSTM2BA6NLU5 285 aa12.62□□□□□ -0.39
PCDH8-201ENST00000338862 SULT2B1O00204 365 aa12.62□□□□□ -0.39
PCDH8-201ENST00000338862 NUDT21O43809 227 aaKnown RBP12.62□□□□□ -0.39
PCDH8-201ENST00000338862 CRHP06850 196 aa12.62□□□□□ -0.39
PCDH8-201ENST00000338862 ASAH2BP0C7U1 165 aa12.62□□□□□ -0.39
PCDH8-201ENST00000338862 MUC1P15941 1255 aaPredicted RBP12.62□□□□□ -0.39
PCDH8-201ENST00000338862 CYCSP99999 105 aaKnown RBP12.62□□□□□ -0.39
PCDH8-201ENST00000338862 FAM24BQ8N5W8 94 aa12.62□□□□□ -0.39
PCDH8-201ENST00000338862 FNDC9Q8TBE3 224 aa12.62□□□□□ -0.39
PCDH8-201ENST00000338862 C11orf40Q8WZ69 217 aa12.62□□□□□ -0.39
PCDH8-201ENST00000338862 THRSPQ92748 146 aa12.62□□□□□ -0.39
PCDH8-201ENST00000338862 CLCC1Q96S66 551 aa12.62□□□□□ -0.39
PCDH8-201ENST00000338862 PBOV1Q9GZY1 135 aa12.62□□□□□ -0.39
PCDH8-201ENST00000338862 TXNIPQ9H3M7 391 aa12.62□□□□□ -0.39
PCDH8-201ENST00000338862 IFT22Q9H7X7 185 aa12.62□□□□□ -0.39
PCDH8-201ENST00000338862 NXT1Q9UKK6 140 aaKnown RBP12.62□□□□□ -0.39
PCDH8-201ENST00000338862 RNASEK-C17orf49H0YIS7 233 aa12.62□□□□□ -0.39
PCDH8-201ENST00000338862 ANGPTL7O43827 346 aa12.62□□□□□ -0.39
PCDH8-201ENST00000338862 VSIG8P0DPA2 414 aa12.62□□□□□ -0.39
PCDH8-201ENST00000338862 FCGR2AP12318 317 aa12.62□□□□□ -0.39
PCDH8-201ENST00000338862 ZNF529Q6P280 563 aa12.62□□□□□ -0.39
PCDH8-201ENST00000338862 C8orf44Q96CB5 159 aa12.62□□□□□ -0.39
PCDH8-201ENST00000338862 SDHAF3Q9NRP4 125 aa12.62□□□□□ -0.39
PCDH8-201ENST00000338862 CACNA1DQ01668 2161 aa12.62□□□□□ -0.39
PCDH8-201ENST00000338862 HSPB6O14558 160 aa12.62□□□□□ -0.39
PCDH8-201ENST00000338862 PPICP45877 212 aa12.62□□□□□ -0.39
PCDH8-201ENST00000338862 RABIFP47224 123 aa12.62□□□□□ -0.39
PCDH8-201ENST00000338862 MEOX2P50222 304 aa12.62□□□□□ -0.39
PCDH8-201ENST00000338862 ZNF41P51814 821 aaPredicted RBP12.62□□□□□ -0.39
PCDH8-201ENST00000338862 POLR2HP52434 150 aaKnown RBP12.62□□□□□ -0.39
PCDH8-201ENST00000338862 MICBQ29980 383 aa12.62□□□□□ -0.39
PCDH8-201ENST00000338862 C9orf50Q5SZB4 431 aa12.62□□□□□ -0.39
PCDH8-201ENST00000338862 SHEQ5VZ18 495 aa12.62□□□□□ -0.39
PCDH8-201ENST00000338862 CLEC18BQ6UXF7 455 aa12.62□□□□□ -0.39
PCDH8-201ENST00000338862 TERB2Q8NHR7 220 aa12.62□□□□□ -0.39
PCDH8-201ENST00000338862 FAM213BQ8TBF2 198 aa12.62□□□□□ -0.39
PCDH8-201ENST00000338862 SFT2D1Q8WV19 159 aa12.62□□□□□ -0.39
PCDH8-201ENST00000338862 TCEAL3Q969E4 200 aa12.62□□□□□ -0.39
PCDH8-201ENST00000338862 MCHR2Q969V1 340 aa12.62□□□□□ -0.39
PCDH8-201ENST00000338862 SLC19A3Q9BZV2 496 aa12.62□□□□□ -0.39
PCDH8-201ENST00000338862 C1orf198Q9H425 327 aa12.62□□□□□ -0.39
PCDH8-201ENST00000338862 SLC5A6Q9Y289 635 aa12.62□□□□□ -0.39
PCDH8-201ENST00000338862 DOCK8Q8NF50 2099 aa12.61□□□□□ -0.39
PCDH8-201ENST00000338862 A6NLC8 198 aa12.61□□□□□ -0.39
PCDH8-201ENST00000338862 OR5K4A6NMS3 321 aa12.61□□□□□ -0.39
PCDH8-201ENST00000338862 ZNF44P15621 663 aa12.61□□□□□ -0.39
PCDH8-201ENST00000338862 PTGFRP43088 359 aa12.61□□□□□ -0.39
PCDH8-201ENST00000338862 OR1D5P58170 312 aa12.61□□□□□ -0.39
PCDH8-201ENST00000338862 MPPED2Q15777 294 aa12.61□□□□□ -0.39
PCDH8-201ENST00000338862 HFEQ30201 348 aa12.61□□□□□ -0.39
PCDH8-201ENST00000338862 OR2A2Q6IF42 318 aa12.61□□□□□ -0.39
PCDH8-201ENST00000338862 SULF2Q8IWU5 870 aa12.61□□□□□ -0.39
PCDH8-201ENST00000338862 EXD3Q8N9H8 876 aa12.61□□□□□ -0.39
PCDH8-201ENST00000338862 ZNF565Q8N9K5 539 aa12.61□□□□□ -0.39
PCDH8-201ENST00000338862 LRFN5Q96NI6 719 aa12.61□□□□□ -0.39
PCDH8-201ENST00000338862 WWTR1Q9GZV5 400 aa12.61□□□□□ -0.39
PCDH8-201ENST00000338862 PPP4R1LQ9P1A2 415 aa12.61□□□□□ -0.39
PCDH8-201ENST00000338862 THSD7BQ9C0I4 1608 aa12.61□□□□□ -0.39
PCDH8-201ENST00000338862 TRBV5-7A0A0A0MS05 114 aa12.61□□□□□ -0.39
PCDH8-201ENST00000338862 FCGR2CP31995 323 aa12.61□□□□□ -0.39
PCDH8-201ENST00000338862 SLC6A8P48029 635 aa12.61□□□□□ -0.39
PCDH8-201ENST00000338862 FABP9Q0Z7S8 132 aa12.61□□□□□ -0.39
PCDH8-201ENST00000338862 NCMAPQ5T1S8 102 aa12.61□□□□□ -0.39
PCDH8-201ENST00000338862 DRAM2Q6UX65 266 aa12.61□□□□□ -0.39
PCDH8-201ENST00000338862 ZSCAN4Q8NAM6 433 aaPredicted RBP12.61□□□□□ -0.39
PCDH8-201ENST00000338862 TMEM234Q8WY98 164 aa12.61□□□□□ -0.39
PCDH8-201ENST00000338862 ELSPBP1Q96BH3 223 aa12.61□□□□□ -0.39
PCDH8-201ENST00000338862 RRNAD1Q96FB5 475 aaKnown RBP12.61□□□□□ -0.39
PCDH8-201ENST00000338862 MMP24Q9Y5R2 645 aa12.61□□□□□ -0.39
PCDH8-201ENST00000338862 EYSQ5T1H1 3165 aa12.61□□□□□ -0.39
PCDH8-201ENST00000338862 DIDO1Q9BTC0 2240 aaKnown RBP12.61□□□□□ -0.39
PCDH8-201ENST00000338862 IGKV1D-43A0A0B4J1Z2 117 aa12.61□□□□□ -0.39
PCDH8-201ENST00000338862 RAB19A4D1S5 217 aa12.61□□□□□ -0.39
PCDH8-201ENST00000338862 MTRF1O75570 445 aaKnown RBP12.61□□□□□ -0.39
PCDH8-201ENST00000338862 NME1P15531 152 aaKnown RBP12.61□□□□□ -0.39
PCDH8-201ENST00000338862 ABCD3P28288 659 aa12.61□□□□□ -0.39
PCDH8-201ENST00000338862 HSD17B7P56937 341 aa12.61□□□□□ -0.39
PCDH8-201ENST00000338862 HSF1Q00613 529 aa12.61□□□□□ -0.39
PCDH8-201ENST00000338862 EIF2S3LQ2VIR3 472 aaKnown RBP12.61□□□□□ -0.39
PCDH8-201ENST00000338862 TMEM176BQ3YBM2 270 aaPredicted RBP12.61□□□□□ -0.39
PCDH8-201ENST00000338862 OGFOD3Q6PK18 319 aa12.61□□□□□ -0.39
PCDH8-201ENST00000338862 TMEM217Q8N7C4 229 aa12.61□□□□□ -0.39
PCDH8-201ENST00000338862 S100PBPQ96BU1 408 aa12.61□□□□□ -0.39
PCDH8-201ENST00000338862 PIK3IP1Q96FE7 263 aa12.61□□□□□ -0.39
PCDH8-201ENST00000338862 SLC46A1Q96NT5 459 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms