RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 GUCA2AQ02747 115 aa9.44□□□□□ -0.9
CSMD2-202ENST00000338325 ZNF92Q03936 586 aa9.44□□□□□ -0.9
CSMD2-202ENST00000338325 MZT1Q08AG7 82 aa9.44□□□□□ -0.9
CSMD2-202ENST00000338325 DGCR6Q14129 220 aa9.44□□□□□ -0.9
CSMD2-202ENST00000338325 FAM189A2Q15884 450 aa9.44□□□□□ -0.9
CSMD2-202ENST00000338325 RFX4Q33E94 735 aa9.44□□□□□ -0.9
CSMD2-202ENST00000338325 SNAI3Q3KNW1 292 aa9.44□□□□□ -0.9
CSMD2-202ENST00000338325 FGD3Q5JSP0 725 aa9.44□□□□□ -0.9
CSMD2-202ENST00000338325 SMARCD3Q6STE5 483 aa9.44□□□□□ -0.9
CSMD2-202ENST00000338325 Q6ZTK2 550 aa9.44□□□□□ -0.9
CSMD2-202ENST00000338325 TSEN54Q7Z6J9 526 aaKnown RBP9.44□□□□□ -0.9
CSMD2-202ENST00000338325 CMTM4Q8IZR5 234 aa9.44□□□□□ -0.9
CSMD2-202ENST00000338325 FGFRL1Q8N441 504 aa9.44□□□□□ -0.9
CSMD2-202ENST00000338325 LY6G5BQ8NDX9 201 aa9.44□□□□□ -0.9
CSMD2-202ENST00000338325 OR5R1Q8NH85 324 aa9.44□□□□□ -0.9
CSMD2-202ENST00000338325 OR2AE1Q8NHA4 323 aa9.44□□□□□ -0.9
CSMD2-202ENST00000338325 ERMAPQ96PL5 475 aaPredicted RBP9.44□□□□□ -0.9
CSMD2-202ENST00000338325 KRCC1Q9NPI7 259 aaPredicted RBP9.44□□□□□ -0.9
CSMD2-202ENST00000338325 SIRT7Q9NRC8 400 aa9.44□□□□□ -0.9
CSMD2-202ENST00000338325 C14orf119Q9NWQ9 140 aa9.44□□□□□ -0.9
CSMD2-202ENST00000338325 GMPR2Q9P2T1 348 aaKnown RBP9.44□□□□□ -0.9
CSMD2-202ENST00000338325 FBLN5Q9UBX5 448 aa9.44□□□□□ -0.9
CSMD2-202ENST00000338325 AP3M1Q9Y2T2 418 aa9.44□□□□□ -0.9
CSMD2-202ENST00000338325 RNASEK-C17orf49H0YIS7 233 aa9.43□□□□□ -0.9
CSMD2-202ENST00000338325 NPFFO15130 113 aa9.43□□□□□ -0.9
CSMD2-202ENST00000338325 SERPINA1P01009 418 aa9.43□□□□□ -0.9
CSMD2-202ENST00000338325 HLA-DQA2P01906 255 aa9.43□□□□□ -0.9
CSMD2-202ENST00000338325 PRB2P02812 416 aaPredicted RBP9.43□□□□□ -0.9
CSMD2-202ENST00000338325 TROVE2P10155 538 aaKnown RBP eCLIP9.43□□□□□ -0.9
CSMD2-202ENST00000338325 EEF1B2P24534 225 aaKnown RBP9.43□□□□□ -0.9
CSMD2-202ENST00000338325 GABRA5P31644 462 aa9.43□□□□□ -0.9
CSMD2-202ENST00000338325 DBPQ10586 325 aaPredicted RBP9.43□□□□□ -0.9
CSMD2-202ENST00000338325 POU4F2Q12837 409 aa9.43□□□□□ -0.9
CSMD2-202ENST00000338325 PCK2Q16822 640 aa9.43□□□□□ -0.9
CSMD2-202ENST00000338325 GLYATL3Q5SZD4 288 aa9.43□□□□□ -0.9
CSMD2-202ENST00000338325 SLC35E4Q6ICL7 350 aa9.43□□□□□ -0.9
CSMD2-202ENST00000338325 ARPINQ7Z6K5 226 aa9.43□□□□□ -0.9
CSMD2-202ENST00000338325 ZBTB46Q86UZ6 589 aa9.43□□□□□ -0.9
CSMD2-202ENST00000338325 FANK1Q8TC84 345 aa9.43□□□□□ -0.9
CSMD2-202ENST00000338325 SPTSSAQ969W0 71 aa9.43□□□□□ -0.9
CSMD2-202ENST00000338325 MAP6Q96JE9 813 aa9.43□□□□□ -0.9
CSMD2-202ENST00000338325 DMRTB1Q96MA1 342 aa9.43□□□□□ -0.9
CSMD2-202ENST00000338325 NMNAT3Q96T66 252 aa9.43□□□□□ -0.9
CSMD2-202ENST00000338325 PPA2Q9H2U2 334 aa9.43□□□□□ -0.9
CSMD2-202ENST00000338325 RPRD1BQ9NQG5 326 aaKnown RBP9.43□□□□□ -0.9
CSMD2-202ENST00000338325 CMTM6Q9NX76 183 aa9.43□□□□□ -0.9
CSMD2-202ENST00000338325 KCNG2Q9UJ96 466 aa9.43□□□□□ -0.9
CSMD2-202ENST00000338325 LOC100653049A0A140TA62 436 aa9.42□□□□□ -0.9
CSMD2-202ENST00000338325 A0A1B0GW55 424 aa9.42□□□□□ -0.9
CSMD2-202ENST00000338325 BHLHE40O14503 412 aa9.42□□□□□ -0.9
CSMD2-202ENST00000338325 GSTA4O15217 222 aa9.42□□□□□ -0.9
CSMD2-202ENST00000338325 GPR37O15354 613 aa9.42□□□□□ -0.9
CSMD2-202ENST00000338325 KRT34O76011 436 aa9.42□□□□□ -0.9
CSMD2-202ENST00000338325 PAHP00439 452 aa9.42□□□□□ -0.9
CSMD2-202ENST00000338325 DUX4L2P0CJ85 424 aa9.42□□□□□ -0.9
CSMD2-202ENST00000338325 DUX4L3P0CJ86 424 aa9.42□□□□□ -0.9
CSMD2-202ENST00000338325 DUX4L4P0CJ87 422 aa9.42□□□□□ -0.9
CSMD2-202ENST00000338325 DUX4L5P0CJ88 424 aa9.42□□□□□ -0.9
CSMD2-202ENST00000338325 DUX4L6P0CJ89 424 aa9.42□□□□□ -0.9
CSMD2-202ENST00000338325 DUX4L7P0CJ90 424 aa9.42□□□□□ -0.9
CSMD2-202ENST00000338325 MUC1P15941 1255 aaPredicted RBP9.42□□□□□ -0.9
CSMD2-202ENST00000338325 HIST1H1CP16403 213 aaKnown RBP9.42□□□□□ -0.9
CSMD2-202ENST00000338325 ANOS1P23352 680 aa9.42□□□□□ -0.9
CSMD2-202ENST00000338325 SLC6A6P31641 620 aa9.42□□□□□ -0.9
CSMD2-202ENST00000338325 LIPEQ05469 1076 aa9.42□□□□□ -0.9
CSMD2-202ENST00000338325 KLRD1Q13241 179 aa9.42□□□□□ -0.9
CSMD2-202ENST00000338325 MICBQ29980 383 aa9.42□□□□□ -0.9
CSMD2-202ENST00000338325 WDR38Q5JTN6 314 aa9.42□□□□□ -0.9
CSMD2-202ENST00000338325 DUX4L9Q6RFH8 374 aaPredicted RBP9.42□□□□□ -0.9
CSMD2-202ENST00000338325 SLC36A1Q7Z2H8 476 aa9.42□□□□□ -0.9
CSMD2-202ENST00000338325 OR56B2PQ8NGI1 322 aa9.42□□□□□ -0.9
CSMD2-202ENST00000338325 OR4K13Q8NH42 304 aa9.42□□□□□ -0.9
CSMD2-202ENST00000338325 CCL13Q99616 98 aa9.42□□□□□ -0.9
CSMD2-202ENST00000338325 FN3KQ9H479 309 aa9.42□□□□□ -0.9
CSMD2-202ENST00000338325 OPA3Q9H6K4 179 aa9.42□□□□□ -0.9
CSMD2-202ENST00000338325 SAR1AQ9NR31 198 aa9.42□□□□□ -0.9
CSMD2-202ENST00000338325 DUX4Q9UBX2 424 aa9.42□□□□□ -0.9
CSMD2-202ENST00000338325 DNAH3Q8TD57 4116 aa9.42□□□□□ -0.9
CSMD2-202ENST00000338325 TRBV4-1A0A0J9YWV2 114 aa9.41□□□□□ -0.9
CSMD2-202ENST00000338325 A0A1W2PRD5 423 aa9.41□□□□□ -0.9
CSMD2-202ENST00000338325 A0A1W2PRF3 423 aa9.41□□□□□ -0.9
CSMD2-202ENST00000338325 A0A1W2PRM7 423 aa9.41□□□□□ -0.9
CSMD2-202ENST00000338325 ARPC3O15145 178 aa9.41□□□□□ -0.9
CSMD2-202ENST00000338325 OTX1P32242 354 aaPredicted RBP9.41□□□□□ -0.9
CSMD2-202ENST00000338325 GRK5P34947 590 aa9.41□□□□□ -0.9
CSMD2-202ENST00000338325 SAA4P35542 130 aa9.41□□□□□ -0.9
CSMD2-202ENST00000338325 ELF3P78545 371 aaPredicted RBP9.41□□□□□ -0.9
CSMD2-202ENST00000338325 PRB3Q04118 309 aaPredicted RBP9.41□□□□□ -0.9
CSMD2-202ENST00000338325 SEC23BQ15437 767 aa9.41□□□□□ -0.9
CSMD2-202ENST00000338325 C11orf88Q6PI97 169 aa9.41□□□□□ -0.9
CSMD2-202ENST00000338325 DRAM2Q6UX65 266 aa9.41□□□□□ -0.9
CSMD2-202ENST00000338325 SLC15A3Q8IY34 581 aa9.41□□□□□ -0.9
CSMD2-202ENST00000338325 LNX2Q8N448 690 aa9.41□□□□□ -0.9
CSMD2-202ENST00000338325 FAM216BQ8N7L0 139 aa9.41□□□□□ -0.9
CSMD2-202ENST00000338325 Q8N7P7 452 aa9.41□□□□□ -0.9
CSMD2-202ENST00000338325 MRAPQ8TCY5 172 aa9.41□□□□□ -0.9
CSMD2-202ENST00000338325 LRRC29Q8WV35 223 aa9.41□□□□□ -0.9
CSMD2-202ENST00000338325 PPP1R14AQ96A00 147 aa9.41□□□□□ -0.9
CSMD2-202ENST00000338325 RCN3Q96D15 328 aa9.41□□□□□ -0.9
CSMD2-202ENST00000338325 OR52D1Q9H346 318 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms