RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 PAPOLGQ9BWT3 736 aaKnown RBP7.35□□□□□ -1.23
HPS4-201ENST00000336873 ZNF768Q9H5H4 540 aaKnown RBP7.35□□□□□ -1.23
HPS4-201ENST00000336873 PISDQ9UG56 409 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 CSAG2Q9Y5P2 127 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 A6NCN8 305 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 RAMP1O60894 148 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 CCL4P13236 92 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 NME1P15531 152 aaKnown RBP7.35□□□□□ -1.23
HPS4-201ENST00000336873 CD96P40200 585 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 DYRK1AQ13627 763 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 HLXQ14774 488 aaPredicted RBP7.35□□□□□ -1.23
HPS4-201ENST00000336873 HACD4Q5VWC8 232 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 RNLSQ5VYX0 342 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 MCEMP1Q8IX19 187 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 ZNF485Q8NCK3 441 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 OR5L2Q8NGL0 311 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 CYYR1Q96J86 154 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 UCN2Q96RP3 112 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 TIMP4Q99727 224 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 ZNF649Q9BS31 505 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 PBOV1Q9GZY1 135 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 PTTG3PQ9NZH4 202 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 GDF2Q9UK05 429 aaPredicted RBP7.35□□□□□ -1.23
HPS4-201ENST00000336873 ZNF175Q9Y473 711 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 OR5H15A6NDH6 313 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 ZNF98A6NK75 572 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 MCRIP1C9JLW8 97 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 H7C417 338 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 TP53I11O14683 189 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 UPK3AO75631 287 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 NDUFB6O95139 128 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 ICAM2P13598 275 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 B4GALT1P15291 398 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 GLRA1P23415 457 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 LTBRP36941 435 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 CX3CR1P49238 355 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 PPT1P50897 306 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 CCL7P80098 99 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 PLGLB1Q02325 96 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 CLINT1Q14677 625 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 FAM76BQ5HYJ3 339 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 MISPQ8IVT2 679 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 CMIPQ8IY22 773 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 TMEM217Q8N7C4 229 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 TMEM104Q8NE00 496 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 FLVCR1-AS1Q8TAF5 88 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 ADAT3Q96EY9 351 aaPredicted RBP7.35□□□□□ -1.23
HPS4-201ENST00000336873 ARHGAP5-AS1Q96IT6 56 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 CDC6Q99741 560 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 SUCNR1Q9BXA5 334 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 MTFP1Q9UDX5 166 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 PIGLQ9Y2B2 252 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 FREM1Q5H8C1 2179 aa7.35□□□□□ -1.23
HPS4-201ENST00000336873 hCG_1807616A0A1W2PRN6 198 aa7.34□□□□□ -1.23
HPS4-201ENST00000336873 MEGF11A6BM72 1044 aa7.34□□□□□ -1.23
HPS4-201ENST00000336873 SLC17A2O00624 439 aa7.34□□□□□ -1.23
HPS4-201ENST00000336873 GNRHRP30968 328 aa7.34□□□□□ -1.23
HPS4-201ENST00000336873 FUT7Q11130 342 aa7.34□□□□□ -1.23
HPS4-201ENST00000336873 FZD5Q13467 585 aa7.34□□□□□ -1.23
HPS4-201ENST00000336873 SMAD4Q13485 552 aaKnown RBP7.34□□□□□ -1.23
HPS4-201ENST00000336873 OGFOD3Q6PK18 319 aa7.34□□□□□ -1.23
HPS4-201ENST00000336873 REEP6Q96HR9 211 aa7.34□□□□□ -1.23
HPS4-201ENST00000336873 LAT2Q9GZY6 243 aa7.34□□□□□ -1.23
HPS4-201ENST00000336873 POLE3Q9NRF9 147 aa7.34□□□□□ -1.23
HPS4-201ENST00000336873 OCIAD1Q9NX40 245 aa7.34□□□□□ -1.23
HPS4-201ENST00000336873 PCOLCE2Q9UKZ9 415 aa7.34□□□□□ -1.23
HPS4-201ENST00000336873 FAM96BQ9Y3D0 163 aa7.34□□□□□ -1.23
HPS4-201ENST00000336873 SIT1Q9Y3P8 196 aa7.34□□□□□ -1.23
HPS4-201ENST00000336873 ANKRD20A5PA0PJZ0 165 aa7.34□□□□□ -1.23
HPS4-201ENST00000336873 PHYHO14832 338 aa7.34□□□□□ -1.23
HPS4-201ENST00000336873 IFNA21P01568 189 aa7.34□□□□□ -1.23
HPS4-201ENST00000336873 MST1P26927 711 aa7.34□□□□□ -1.23
HPS4-201ENST00000336873 USF2Q15853 346 aaPredicted RBP7.34□□□□□ -1.23
HPS4-201ENST00000336873 LYSMD4Q5XG99 296 aa7.34□□□□□ -1.23
HPS4-201ENST00000336873 RNF144BQ7Z419 303 aa7.34□□□□□ -1.23
HPS4-201ENST00000336873 C6orf201Q7Z4U5 140 aa7.34□□□□□ -1.23
HPS4-201ENST00000336873 ZSCAN1Q8NBB4 408 aa7.34□□□□□ -1.23
HPS4-201ENST00000336873 ADAD2Q8NCV1 583 aaKnown RBP7.34□□□□□ -1.23
HPS4-201ENST00000336873 OR5T1Q8NG75 326 aa7.34□□□□□ -1.23
HPS4-201ENST00000336873 RHBDD1Q8TEB9 315 aa7.34□□□□□ -1.23
HPS4-201ENST00000336873 LRRC46Q96FV0 321 aa7.34□□□□□ -1.23
HPS4-201ENST00000336873 PLPPR2Q96GM1 343 aa7.34□□□□□ -1.23
HPS4-201ENST00000336873 HDHD3Q9BSH5 251 aaPredicted RBP7.34□□□□□ -1.23
HPS4-201ENST00000336873 PRMT8Q9NR22 394 aaPredicted RBP7.34□□□□□ -1.23
HPS4-201ENST00000336873 MRPL22Q9NWU5 206 aaKnown RBP7.34□□□□□ -1.23
HPS4-201ENST00000336873 DOCK11Q5JSL3 2073 aa7.34□□□□□ -1.24
HPS4-201ENST00000336873 NSG1A0A0A6YYJ2 146 aa7.34□□□□□ -1.24
HPS4-201ENST00000336873 A0A1B0GUH1 482 aa7.34□□□□□ -1.24
HPS4-201ENST00000336873 A0A1W2PR80 420 aa7.34□□□□□ -1.24
HPS4-201ENST00000336873 FAM166BA8MTA8 275 aa7.34□□□□□ -1.24
HPS4-201ENST00000336873 TNFSF11O14788 317 aa7.34□□□□□ -1.24
HPS4-201ENST00000336873 TCN2P20062 427 aa7.34□□□□□ -1.24
HPS4-201ENST00000336873 PVALBP20472 110 aaPredicted RBP7.34□□□□□ -1.24
HPS4-201ENST00000336873 HTR5AP47898 357 aa7.34□□□□□ -1.24
HPS4-201ENST00000336873 ACY1Q03154 408 aa7.34□□□□□ -1.24
HPS4-201ENST00000336873 DMWDQ09019 674 aa7.34□□□□□ -1.24
HPS4-201ENST00000336873 Q3ZCU0 254 aa7.34□□□□□ -1.24
HPS4-201ENST00000336873 PDSS1Q5T2R2 415 aa7.34□□□□□ -1.24
HPS4-201ENST00000336873 PXKQ7Z7A4 578 aa7.34□□□□□ -1.24
HPS4-201ENST00000336873 OR1M1Q8NGA1 313 aa7.34□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms