RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 GPM6AP51674 278 aa11.87□□□□□ -0.51
HLCS-201ENST00000336648 GP2P55259 537 aaKnown RBP11.87□□□□□ -0.51
HLCS-201ENST00000336648 C9orf152Q5JTZ5 239 aa11.87□□□□□ -0.51
HLCS-201ENST00000336648 ABLIM2Q6H8Q1 611 aa11.87□□□□□ -0.51
HLCS-201ENST00000336648 DGAT2L6Q6ZPD8 337 aa11.87□□□□□ -0.51
HLCS-201ENST00000336648 CHST6Q9GZX3 395 aa11.87□□□□□ -0.51
HLCS-201ENST00000336648 GPR84Q9NQS5 396 aa11.87□□□□□ -0.51
HLCS-201ENST00000336648 MEIKINA0A087WXM9 373 aa11.86□□□□□ -0.51
HLCS-201ENST00000336648 GPR31O00270 319 aa11.86□□□□□ -0.51
HLCS-201ENST00000336648 GUSBP08236 651 aa11.86□□□□□ -0.51
HLCS-201ENST00000336648 OR4E1P0C645 316 aa11.86□□□□□ -0.51
HLCS-201ENST00000336648 ZP3P21754 424 aa11.86□□□□□ -0.51
HLCS-201ENST00000336648 PPOXP50336 477 aa11.86□□□□□ -0.51
HLCS-201ENST00000336648 CNN1P51911 297 aaKnown RBP11.86□□□□□ -0.51
HLCS-201ENST00000336648 FGF22Q9HCT0 170 aa11.86□□□□□ -0.51
HLCS-201ENST00000336648 CHST2Q9Y4C5 530 aa11.86□□□□□ -0.51
HLCS-201ENST00000336648 IDSB3KWA1 339 aa11.86□□□□□ -0.51
HLCS-201ENST00000336648 SLC25A6P12236 298 aa11.86□□□□□ -0.51
HLCS-201ENST00000336648 THBS4P35443 961 aa11.86□□□□□ -0.51
HLCS-201ENST00000336648 RPL18Q07020 188 aaKnown RBP11.86□□□□□ -0.51
HLCS-201ENST00000336648 FAM53BQ14153 422 aa11.86□□□□□ -0.51
HLCS-201ENST00000336648 GGNBP1Q5YKI7 109 aa11.86□□□□□ -0.51
HLCS-201ENST00000336648 RNASEKQ6P5S7 137 aaKnown RBP11.86□□□□□ -0.51
HLCS-201ENST00000336648 CA13Q8N1Q1 262 aa11.86□□□□□ -0.51
HLCS-201ENST00000336648 TMEM229BQ8NBD8 167 aa11.86□□□□□ -0.51
HLCS-201ENST00000336648 MENTQ9BUN1 341 aa11.86□□□□□ -0.51
HLCS-201ENST00000336648 SLC17A5Q9NRA2 495 aa11.86□□□□□ -0.51
HLCS-201ENST00000336648 GALNT16Q8N428 558 aa11.86□□□□□ -0.51
HLCS-201ENST00000336648 KIAA1958Q8N8K9 716 aa11.86□□□□□ -0.51
HLCS-201ENST00000336648 CMBLQ96DG6 245 aa11.86□□□□□ -0.51
HLCS-201ENST00000336648 PBOV1Q9GZY1 135 aa11.86□□□□□ -0.51
HLCS-201ENST00000336648 IKZF5Q9H5V7 419 aa11.86□□□□□ -0.51
HLCS-201ENST00000336648 PSENENQ9NZ42 101 aa11.86□□□□□ -0.51
HLCS-201ENST00000336648 AQP8O94778 261 aa11.86□□□□□ -0.51
HLCS-201ENST00000336648 CLDN15P56746 228 aa11.86□□□□□ -0.51
HLCS-201ENST00000336648 CCSMST1Q4G0I0 132 aa11.86□□□□□ -0.51
HLCS-201ENST00000336648 FAHD1Q6P587 224 aa11.86□□□□□ -0.51
HLCS-201ENST00000336648 TMEM88Q6PEY1 159 aa11.86□□□□□ -0.51
HLCS-201ENST00000336648 ARRDC1Q8N5I2 433 aa11.86□□□□□ -0.51
HLCS-201ENST00000336648 IRS1P35568 1242 aa11.85□□□□□ -0.51
HLCS-201ENST00000336648 FUT6P51993 359 aa11.85□□□□□ -0.51
HLCS-201ENST00000336648 UBE2MP61081 183 aaKnown RBP11.85□□□□□ -0.51
HLCS-201ENST00000336648 EXOSC2Q13868 293 aaKnown RBP11.85□□□□□ -0.51
HLCS-201ENST00000336648 SMIM21Q3B7S5 101 aa11.85□□□□□ -0.51
HLCS-201ENST00000336648 ACSM5Q6NUN0 579 aa11.85□□□□□ -0.51
HLCS-201ENST00000336648 TEX37Q96LM6 180 aa11.85□□□□□ -0.51
HLCS-201ENST00000336648 ZNF391Q9UJN7 358 aa11.85□□□□□ -0.51
HLCS-201ENST00000336648 TIMM9Q9Y5J7 89 aa11.85□□□□□ -0.51
HLCS-201ENST00000336648 SH2D7A6NKC9 451 aaPredicted RBP11.85□□□□□ -0.51
HLCS-201ENST00000336648 SSSCA1O60232 199 aa11.85□□□□□ -0.51
HLCS-201ENST00000336648 OR7C2O60412 319 aa11.85□□□□□ -0.51
HLCS-201ENST00000336648 ZNF354AO60765 605 aaPredicted RBP11.85□□□□□ -0.51
HLCS-201ENST00000336648 IL5P05113 134 aa11.85□□□□□ -0.51
HLCS-201ENST00000336648 OR5G3P0C626 314 aa11.85□□□□□ -0.51
HLCS-201ENST00000336648 BTNL3Q6UXE8 466 aa11.85□□□□□ -0.51
HLCS-201ENST00000336648 Q8IYB0 196 aa11.85□□□□□ -0.51
HLCS-201ENST00000336648 ATP23Q9Y6H3 246 aa11.85□□□□□ -0.51
HLCS-201ENST00000336648 MYH10P35580 1976 aa11.85□□□□□ -0.51
HLCS-201ENST00000336648 A0A0A6YYJ9 748 aa11.85□□□□□ -0.51
HLCS-201ENST00000336648 BCL2L11O43521 198 aa11.85□□□□□ -0.51
HLCS-201ENST00000336648 GATCO43716 136 aaKnown RBP11.85□□□□□ -0.51
HLCS-201ENST00000336648 LRP3O75074 770 aa11.85□□□□□ -0.51
HLCS-201ENST00000336648 OR5AL1P0C617 328 aa11.85□□□□□ -0.51
HLCS-201ENST00000336648 RPL34P49207 117 aaKnown RBP11.85□□□□□ -0.51
HLCS-201ENST00000336648 C11orf91Q3C1V1 193 aa11.85□□□□□ -0.51
HLCS-201ENST00000336648 STAC2Q6ZMT1 411 aa11.85□□□□□ -0.51
HLCS-201ENST00000336648 PP6455Q8WZ26 134 aa11.85□□□□□ -0.51
HLCS-201ENST00000336648 LINC00615Q96LM1 132 aaPredicted RBP11.85□□□□□ -0.51
HLCS-201ENST00000336648 FAAP24Q9BTP7 215 aa11.85□□□□□ -0.51
HLCS-201ENST00000336648 PPP1R3CQ9UQK1 317 aa11.85□□□□□ -0.51
HLCS-201ENST00000336648 WDR1O75083 606 aa11.85□□□□□ -0.51
HLCS-201ENST00000336648 RPL29P47914 159 aaKnown RBP11.85□□□□□ -0.51
HLCS-201ENST00000336648 IGSF11Q5DX21 431 aa11.85□□□□□ -0.51
HLCS-201ENST00000336648 PRR27Q6MZM9 219 aa11.85□□□□□ -0.51
HLCS-201ENST00000336648 TMEM207Q6UWW9 146 aa11.85□□□□□ -0.51
HLCS-201ENST00000336648 RBM45Q8IUH3 476 aaKnown RBP11.85□□□□□ -0.51
HLCS-201ENST00000336648 CMTM4Q8IZR5 234 aa11.85□□□□□ -0.51
HLCS-201ENST00000336648 SLC39A7Q92504 469 aa11.85□□□□□ -0.51
HLCS-201ENST00000336648 ZNF195O14628 629 aa11.85□□□□□ -0.51
HLCS-201ENST00000336648 FGF17O60258 216 aa11.85□□□□□ -0.51
HLCS-201ENST00000336648 DRAM2Q6UX65 266 aa11.85□□□□□ -0.51
HLCS-201ENST00000336648 ASB16Q96NS5 453 aa11.85□□□□□ -0.51
HLCS-201ENST00000336648 IER2Q9BTL4 223 aa11.85□□□□□ -0.51
HLCS-201ENST00000336648 PRO1933Q9H354 126 aa11.85□□□□□ -0.51
HLCS-201ENST00000336648 OR51B4Q9Y5P0 310 aa11.85□□□□□ -0.51
HLCS-201ENST00000336648 FAM166BA8MTA8 275 aa11.84□□□□□ -0.51
HLCS-201ENST00000336648 CAPZBP47756 277 aa11.84□□□□□ -0.51
HLCS-201ENST00000336648 PLA1AQ53H76 456 aa11.84□□□□□ -0.51
HLCS-201ENST00000336648 CTRCQ99895 268 aa11.84□□□□□ -0.51
HLCS-201ENST00000336648 WDR61Q9GZS3 305 aaKnown RBP11.84□□□□□ -0.51
HLCS-201ENST00000336648 MYH7P12883 1935 aa11.84□□□□□ -0.51
HLCS-201ENST00000336648 YIF1AO95070 293 aa11.84□□□□□ -0.51
HLCS-201ENST00000336648 KCNJ3P48549 501 aa11.84□□□□□ -0.51
HLCS-201ENST00000336648 ERVFC1-1P60608 527 aa11.84□□□□□ -0.51
HLCS-201ENST00000336648 AQP6Q13520 282 aa11.84□□□□□ -0.51
HLCS-201ENST00000336648 BHLHE23Q8NDY6 225 aa11.84□□□□□ -0.51
HLCS-201ENST00000336648 OR8B4Q96RC9 309 aa11.84□□□□□ -0.51
HLCS-201ENST00000336648 SIGLEC11Q96RL6 698 aa11.84□□□□□ -0.51
HLCS-201ENST00000336648 TBC1D29Q9UFV1 150 aa11.84□□□□□ -0.51
HLCS-201ENST00000336648 OR5V1Q9UGF6 321 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms