RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 DCAF10Q5QP82 559 aa11.08□□□□□ -0.64
LIMK1-201ENST00000336180 OR52W1Q6IF63 320 aa11.08□□□□□ -0.64
LIMK1-201ENST00000336180 ZNF774Q6NX45 483 aa11.08□□□□□ -0.64
LIMK1-201ENST00000336180 TMEM81Q6P7N7 255 aa11.08□□□□□ -0.64
LIMK1-201ENST00000336180 CHMP1BQ7LBR1 199 aa11.08□□□□□ -0.64
LIMK1-201ENST00000336180 GGNQ86UU5 652 aa11.08□□□□□ -0.64
LIMK1-201ENST00000336180 LRRC20Q8TCA0 184 aa11.08□□□□□ -0.64
LIMK1-201ENST00000336180 MAFIPQ8WZ33 124 aa11.08□□□□□ -0.64
LIMK1-201ENST00000336180 GPER1Q99527 375 aa11.08□□□□□ -0.64
LIMK1-201ENST00000336180 CALHM2Q9HA72 323 aa11.08□□□□□ -0.64
LIMK1-201ENST00000336180 ZNF878C9JN71 531 aa11.08□□□□□ -0.64
LIMK1-201ENST00000336180 PRSS44E7EML9 344 aa11.08□□□□□ -0.64
LIMK1-201ENST00000336180 C3orf80F5H4A9 247 aa11.08□□□□□ -0.64
LIMK1-201ENST00000336180 FABP7O15540 132 aa11.08□□□□□ -0.64
LIMK1-201ENST00000336180 HPP00738 406 aa11.08□□□□□ -0.64
LIMK1-201ENST00000336180 CSRP1P21291 193 aaKnown RBP11.08□□□□□ -0.64
LIMK1-201ENST00000336180 RAC1P63000 192 aa11.08□□□□□ -0.64
LIMK1-201ENST00000336180 SNAI3Q3KNW1 292 aa11.08□□□□□ -0.64
LIMK1-201ENST00000336180 GLT8D1Q68CQ7 371 aa11.08□□□□□ -0.64
LIMK1-201ENST00000336180 CD163Q86VB7 1156 aa11.08□□□□□ -0.64
LIMK1-201ENST00000336180 SULF2Q8IWU5 870 aa11.08□□□□□ -0.64
LIMK1-201ENST00000336180 CDH26Q8IXH8 852 aa11.08□□□□□ -0.64
LIMK1-201ENST00000336180 TMEM104Q8NE00 496 aa11.08□□□□□ -0.64
LIMK1-201ENST00000336180 CHST6Q9GZX3 395 aa11.08□□□□□ -0.64
LIMK1-201ENST00000336180 PLEKHA1Q9HB21 404 aa11.08□□□□□ -0.64
LIMK1-201ENST00000336180 PNRC2Q9NPJ4 139 aaKnown RBP11.08□□□□□ -0.64
LIMK1-201ENST00000336180 ZNF275Q9NSD4 429 aaPredicted RBP11.08□□□□□ -0.64
LIMK1-201ENST00000336180 LOC100289279A0A1B0GTE1 492 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 A0A1B0GTI1 187 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 SHOXO15266 292 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 NKX2-8O15522 239 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 DHHO43323 396 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 TLX3O43711 291 aaPredicted RBP11.07□□□□□ -0.64
LIMK1-201ENST00000336180 AQP8O94778 261 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 GNB3P16520 340 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 AWAT2Q6E213 333 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 NOXA1Q86UR1 476 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 ANGPTL5Q86XS5 388 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 OR51S1Q8NGJ8 323 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 OR4C16Q8NGL9 310 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 OR51J1Q9H342 316 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 GABARAPH6UMI1 98 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 ZNF432O94892 652 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 DHFRP00374 187 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 MNDAP41218 407 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 HTR2BP41595 481 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 PCP4P48539 62 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 MAP2K6P52564 334 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 ENDOGQ14249 297 aaKnown RBP11.07□□□□□ -0.64
LIMK1-201ENST00000336180 SCGB2B2Q4G0G5 96 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 ZNF782Q6ZMW2 699 aaPredicted RBP11.07□□□□□ -0.64
LIMK1-201ENST00000336180 AAED1Q7RTV5 226 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 FNDC9Q8TBE3 224 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 PHYHIPQ92561 330 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 SLC25A28Q96A46 364 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 SNX18Q96RF0 628 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 MFRPQ9BY79 579 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 ZNF175Q9Y473 711 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 HSPB11Q9Y547 144 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 WIPF3A6NGB9 483 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 MPIG6BO95866 241 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 RAF1P04049 648 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 ACHEP22303 614 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 SSTR2P30874 369 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 HGFACQ04756 655 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 PDCD1Q15116 288 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 FDX2Q6P4F2 183 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 C1QL2Q7Z5L3 287 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 FGD2Q7Z6J4 655 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 TMED4Q7Z7H5 227 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 CREB3L1Q96BA8 519 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 ZC3HAV1LQ96H79 300 aaKnown RBP11.07□□□□□ -0.64
LIMK1-201ENST00000336180 LYZL4Q96KX0 146 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 SGCZQ96LD1 299 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 DIABLOQ9NR28 239 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 ZNF69Q9UC07 566 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 LIPGQ9Y5X9 500 aa11.07□□□□□ -0.64
LIMK1-201ENST00000336180 PYCARD-AS1I3L0S3 204 aa11.06□□□□□ -0.64
LIMK1-201ENST00000336180 RBBP9O75884 186 aa11.06□□□□□ -0.64
LIMK1-201ENST00000336180 PMS2P2O95744 297 aa11.06□□□□□ -0.64
LIMK1-201ENST00000336180 PTBP1P26599 531 aaKnown RBP eCLIP11.06□□□□□ -0.64
LIMK1-201ENST00000336180 BDKRB2P30411 391 aa11.06□□□□□ -0.64
LIMK1-201ENST00000336180 FOXO1Q12778 655 aa11.06□□□□□ -0.64
LIMK1-201ENST00000336180 IGFBP7Q16270 282 aa11.06□□□□□ -0.64
LIMK1-201ENST00000336180 CEACAM16Q2WEN9 425 aa11.06□□□□□ -0.64
LIMK1-201ENST00000336180 TMEM244Q5VVB8 128 aa11.06□□□□□ -0.64
LIMK1-201ENST00000336180 OR1M1Q8NGA1 313 aa11.06□□□□□ -0.64
LIMK1-201ENST00000336180 SPRY4Q9C004 299 aa11.06□□□□□ -0.64
LIMK1-201ENST00000336180 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.06□□□□□ -0.64
LIMK1-201ENST00000336180 NOX3Q9HBY0 568 aa11.06□□□□□ -0.64
LIMK1-201ENST00000336180 TINAGQ9UJW2 476 aa11.06□□□□□ -0.64
LIMK1-201ENST00000336180 MSR1P21757 451 aa11.06□□□□□ -0.64
LIMK1-201ENST00000336180 ADH6P28332 368 aa11.06□□□□□ -0.64
LIMK1-201ENST00000336180 MMP16P51512 607 aa11.06□□□□□ -0.64
LIMK1-201ENST00000336180 CSNK2A1P68400 391 aaPredicted RBP11.06□□□□□ -0.64
LIMK1-201ENST00000336180 UNC119Q13432 240 aa11.06□□□□□ -0.64
LIMK1-201ENST00000336180 PCK2Q16822 640 aa11.06□□□□□ -0.64
LIMK1-201ENST00000336180 GSG1Q2KHT4 349 aa11.06□□□□□ -0.64
LIMK1-201ENST00000336180 ANKRD16Q6P6B7 361 aa11.06□□□□□ -0.64
LIMK1-201ENST00000336180 GALNT16Q8N428 558 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms