RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 ZNF25P17030 456 aaPredicted RBP5.02□□□□□ -1.61
PTPRB-202ENST00000334414 TEAD1P28347 426 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 CHRNA7P36544 502 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 CLDN17P56750 224 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 SLIRPQ9GZT3 109 aaKnown RBP5.02□□□□□ -1.61
PTPRB-202ENST00000334414 RBM38Q9H0Z9 239 aaKnown RBP5.02□□□□□ -1.61
PTPRB-202ENST00000334414 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.02□□□□□ -1.61
PTPRB-202ENST00000334414 IGKV6D-21A0A0A0MT36 114 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 GFRA2O00451 464 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 DSCR3O14972 297 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 HCRTR1O43613 425 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 CFIP05156 583 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 BMPR1AP36894 532 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 CLDN15P56746 228 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 FZD2Q14332 565 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 SYPL1Q16563 259 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 MPV17LQ2QL34 196 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 TMEM268Q5VZI3 342 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 PWWP2BQ6NUJ5 590 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 CD99L2Q8TCZ2 262 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 LRRC15Q8TF66 581 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 NAT6Q93015 286 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 EGLN1Q9GZT9 426 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 CHST2Q9Y4C5 530 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 IGKV6-21A0A0C4DH24 114 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 P2RY10O00398 339 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 SLC25A4P12235 298 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 TM4SF1P30408 202 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 THBS4P35443 961 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 UBE2V2Q15819 145 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 PHLDA2Q53GA4 152 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 TMEM183AQ8IXX5 376 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 HDAC8Q9BY41 377 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 CHST11Q9NPF2 352 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 SIGLEC1Q9BZZ2 1709 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 FLT3LGP49771 235 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 SSR4P51571 173 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 CLDN12P56749 244 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 FDX2Q6P4F2 183 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 OR52E1Q8NGJ3 308 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 OR5D13Q8NGL4 314 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 RTN4IP1Q8WWV3 396 aaPredicted RBP5.02□□□□□ -1.61
PTPRB-202ENST00000334414 TAS2R4Q9NYW5 299 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 USP22Q9UPT9 525 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 IGSF23A1L1A6 192 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 LINC01387J3KSC0 135 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 SOCS6O14544 535 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 HLA-GP17693 338 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 LY6G5CQ5SRR4 150 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 DHRS13Q6UX07 377 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 C9orf62Q8N4C0 152 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 METTL27Q8N6F8 245 aaPredicted RBP5.02□□□□□ -1.61
PTPRB-202ENST00000334414 ZNF383Q8NA42 475 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 TNFRSF13CQ96RJ3 184 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 UBE2ZQ9H832 354 aaPredicted RBP5.02□□□□□ -1.61
PTPRB-202ENST00000334414 MIOXQ9UGB7 285 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 KCND3Q9UK17 655 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 PPT2Q9UMR5 302 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 PRSS38A1L453 326 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 SFT2D2O95562 160 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 SP1P08047 785 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 OR5AL1P0C617 328 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 CCL23P55773 120 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 C19orf47Q8N9M1 422 aaKnown RBP5.02□□□□□ -1.61
PTPRB-202ENST00000334414 GOT1L1Q8NHS2 421 aaPredicted RBP5.02□□□□□ -1.61
PTPRB-202ENST00000334414 KLF15Q9UIH9 416 aa5.02□□□□□ -1.61
PTPRB-202ENST00000334414 SERTM2A0A1B0GWG4 89 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 PRAMEF25A6NGN4 478 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 SIRPB1O00241 398 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 GEMIN2O14893 280 aaKnown RBP5.01□□□□□ -1.61
PTPRB-202ENST00000334414 SIAH2O43255 324 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 PLPP2O43688 288 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 ZNF737O75373 536 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 MPC2O95563 127 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 FUT6P51993 359 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 NR0B2Q15466 257 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 PRAMEF5Q5TYX0 476 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 PRAMEF6Q5VXH4 476 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 SLCO4C1Q6ZQN7 724 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 TCEAL8Q8IYN2 117 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 CARFQ8N187 725 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 OR4F17Q8NGA8 305 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 UQCR10Q9UDW1 63 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 SERTM1A2A2V5 107 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 DDTP30046 118 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 BRS3P32247 399 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 SNRPNP63162 240 aaKnown RBP5.01□□□□□ -1.61
PTPRB-202ENST00000334414 ACVR1Q04771 509 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 PRDX1Q06830 199 aaKnown RBP5.01□□□□□ -1.61
PTPRB-202ENST00000334414 INPP5JQ15735 1006 aaPredicted RBP5.01□□□□□ -1.61
PTPRB-202ENST00000334414 ZNF542PQ5EBM4 170 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 SLC25A30Q5SVS4 291 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 C1orf220Q5T0J3 134 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 ELF5Q9UKW6 265 aaPredicted RBP5.01□□□□□ -1.61
PTPRB-202ENST00000334414 TNFRSF10CO14798 259 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 HIST1H1CP16403 213 aaKnown RBP5.01□□□□□ -1.61
PTPRB-202ENST00000334414 GDF1P27539 372 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 FAM209BQ5JX69 171 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 LYSMD4Q5XG99 296 aa5.01□□□□□ -1.61
PTPRB-202ENST00000334414 XAF1Q6GPH4 301 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms