RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 DMRTC1Q5HYR2 192 aa10.56□□□□□ -0.72
HDAC6-201ENST00000334136 STAC2Q6ZMT1 411 aa10.56□□□□□ -0.72
HDAC6-201ENST00000334136 AAED1Q7RTV5 226 aa10.56□□□□□ -0.72
HDAC6-201ENST00000334136 LRRTM1Q86UE6 522 aa10.56□□□□□ -0.72
HDAC6-201ENST00000334136 EXD3Q8N9H8 876 aa10.56□□□□□ -0.72
HDAC6-201ENST00000334136 OR5D14Q8NGL3 314 aa10.56□□□□□ -0.72
HDAC6-201ENST00000334136 PPP1R3EQ9H7J1 279 aa10.56□□□□□ -0.72
HDAC6-201ENST00000334136 ZNF223Q9UK11 482 aaPredicted RBP10.56□□□□□ -0.72
HDAC6-201ENST00000334136 ETV7Q9Y603 341 aa10.56□□□□□ -0.72
HDAC6-201ENST00000334136 SLC22A23A1A5C7 686 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 SULT1C2O00338 296 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 CXCL13O43927 109 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 GCM2O75603 506 aaPredicted RBP10.55□□□□□ -0.72
HDAC6-201ENST00000334136 AKR7A3O95154 331 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 IFNA17P01571 189 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 RRASP10301 218 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 GABRR1P24046 479 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 GPR139Q6DWJ6 353 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 FBLIM1Q8WUP2 373 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 HOXB13Q92826 284 aaPredicted RBP10.55□□□□□ -0.72
HDAC6-201ENST00000334136 PELI1Q96FA3 418 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 SPACA5Q96QH8 159 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 KIF25Q9UIL4 384 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 SLC22A13Q9Y226 551 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 LOC100289279A0A1B0GTE1 492 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 SHISA8B8ZZ34 492 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 TGFBR3LH3BV60 316 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 P2RY10O00398 339 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 RAD51DO75771 328 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 UMODP07911 640 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 OMGP23515 440 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 DIO1P49895 249 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 TAS2R31P59538 309 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 MFAP5Q13361 173 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 HLXQ14774 488 aaPredicted RBP10.55□□□□□ -0.72
HDAC6-201ENST00000334136 AKR1C8PQ5T2L2 129 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 GABRG1Q8N1C3 465 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 CLRN3Q8NCR9 226 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 PPP1R1CQ8WVI7 109 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 PHYHIPQ92561 330 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 CALHM2Q9HA72 323 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 PLEKHJ1Q9NW61 149 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 K7EPK0 472 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 MT-ATP6P00846 226 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 SLC2A1P11166 492 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 SOX8P57073 446 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 UBE2NP61088 152 aaKnown RBP10.55□□□□□ -0.72
HDAC6-201ENST00000334136 CDONQ4KMG0 1287 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 H1FNTQ75WM6 255 aaPredicted RBP10.55□□□□□ -0.72
HDAC6-201ENST00000334136 CDH26Q8IXH8 852 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 FAM71E2Q8N5Q1 922 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 HSD17B11Q8NBQ5 300 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 DNAJB12Q9NXW2 375 aaKnown RBP10.55□□□□□ -0.72
HDAC6-201ENST00000334136 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 FIGNL2A6NMB9 653 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 PRSS44E7EML9 344 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 PROB1E7EW31 1015 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 OR4E1P0C645 316 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 CPT2P23786 658 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 CLDN17P56750 224 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 OR2B8PP59922 312 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 SNRPNP63162 240 aaKnown RBP10.55□□□□□ -0.72
HDAC6-201ENST00000334136 FOXK1P85037 733 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 TGFBR3Q03167 851 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 PPA1Q15181 289 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 CD226Q15762 336 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 TUSC1Q2TAM9 212 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 SLC36A2Q495M3 483 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 GFRALQ6UXV0 394 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 SULF2Q8IWU5 870 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 KCNRGQ8N5I3 272 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 HAVCR2Q8TDQ0 301 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 FGGYQ96C11 551 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 GIMAP5Q96F15 307 aa10.55□□□□□ -0.72
HDAC6-201ENST00000334136 SDHCQ99643 169 aaPredicted RBP10.55□□□□□ -0.72
HDAC6-201ENST00000334136 NOSIPQ9Y314 301 aaKnown RBP10.55□□□□□ -0.72
HDAC6-201ENST00000334136 ZNF318Q5VUA4 2279 aa10.54□□□□□ -0.72
HDAC6-201ENST00000334136 KLF7O75840 302 aaPredicted RBP10.54□□□□□ -0.72
HDAC6-201ENST00000334136 IGKV3-11P04433 115 aa10.54□□□□□ -0.72
HDAC6-201ENST00000334136 SP1P08047 785 aa10.54□□□□□ -0.72
HDAC6-201ENST00000334136 SERPINA2P20848 420 aa10.54□□□□□ -0.72
HDAC6-201ENST00000334136 CLDN15P56746 228 aa10.54□□□□□ -0.72
HDAC6-201ENST00000334136 MGAT2Q10469 447 aa10.54□□□□□ -0.72
HDAC6-201ENST00000334136 IL10RAQ13651 578 aa10.54□□□□□ -0.72
HDAC6-201ENST00000334136 CEBPEQ15744 281 aa10.54□□□□□ -0.72
HDAC6-201ENST00000334136 Q5BKY6 102 aa10.54□□□□□ -0.72
HDAC6-201ENST00000334136 GLDNQ6ZMI3 551 aaPredicted RBP10.54□□□□□ -0.72
HDAC6-201ENST00000334136 NANPQ8TBE9 248 aa10.54□□□□□ -0.72
HDAC6-201ENST00000334136 EXTL1Q92935 676 aa10.54□□□□□ -0.72
HDAC6-201ENST00000334136 A0A1B0GTH9 108 aa10.54□□□□□ -0.72
HDAC6-201ENST00000334136 EFSO43281 561 aa10.54□□□□□ -0.72
HDAC6-201ENST00000334136 IFI6P09912 130 aa10.54□□□□□ -0.72
HDAC6-201ENST00000334136 ZP3P21754 424 aa10.54□□□□□ -0.72
HDAC6-201ENST00000334136 SRD5A2P31213 254 aa10.54□□□□□ -0.72
HDAC6-201ENST00000334136 C19orf57Q0VDD7 668 aa10.54□□□□□ -0.72
HDAC6-201ENST00000334136 SPTAN1Q13813 2472 aaKnown RBP10.54□□□□□ -0.72
HDAC6-201ENST00000334136 C2orf76Q3KRA6 126 aa10.54□□□□□ -0.72
HDAC6-201ENST00000334136 BEND4Q6ZU67 534 aa10.54□□□□□ -0.72
HDAC6-201ENST00000334136 WDSUB1Q8N9V3 476 aa10.54□□□□□ -0.72
HDAC6-201ENST00000334136 APCDD1LQ8NCL9 501 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms