RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 SLC25A26Q70HW3 274 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 CADM4Q8NFZ8 388 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 PINX1Q96BK5 328 aaKnown RBP9.17□□□□□ -0.94
CHD3-201ENST00000330494 SARAFQ96BY9 339 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 BCL2L10Q9HD36 194 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 ZMAT5Q9UDW3 170 aaKnown RBP9.17□□□□□ -0.94
CHD3-201ENST00000330494 CRYAAP02489 173 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 JUNBP17275 347 aaPredicted RBP9.17□□□□□ -0.94
CHD3-201ENST00000330494 GABRA4P48169 554 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 STAC2Q6ZMT1 411 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 NAA40Q86UY6 237 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 SFTPA2Q8IWL1 248 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 NOXO1Q8NFA2 376 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 BSCL2Q96G97 398 aaPredicted RBP9.17□□□□□ -0.94
CHD3-201ENST00000330494 CRISPLD2Q9H0B8 497 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 B9D1Q9UPM9 204 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 ZNF891A8MT65 544 aaPredicted RBP9.17□□□□□ -0.94
CHD3-201ENST00000330494 CLN5O75503 358 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 CPN1P15169 458 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 ZNF83P51522 516 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 WNT3P56703 355 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 EGR3Q06889 387 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 LPCAT3Q6P1A2 487 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 ZDHHC23Q8IYP9 409 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 OR1J1Q8NGS3 322 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 SHARPINQ9H0F6 387 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 A3GALT2U3KPV4 340 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 PDCD11Q14690 1871 aaKnown RBP9.17□□□□□ -0.94
CHD3-201ENST00000330494 BRWD1Q9NSI6 2320 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 MT-CO3P00414 261 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 IAPPP10997 89 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 NPBWR1P48145 328 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 MEOX1P50221 254 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 SHBQ15464 509 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 PLXDC2Q6UX71 529 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 CAMKMTQ7Z624 323 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 KMT5CQ86Y97 462 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 WNT16Q9UBV4 365 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 KCNE1BA0A087WTH5 132 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 PCK2Q16822 640 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 HES3Q5TGS1 186 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 NLRC3Q7RTR2 1065 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 SLC43A2Q8N370 569 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 OR52B4Q8NGK2 314 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 SMIM19Q96E16 107 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 RIMS4Q9H426 269 aaPredicted RBP9.17□□□□□ -0.94
CHD3-201ENST00000330494 FBXO4Q9UKT5 387 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 GAB2Q9UQC2 676 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 CSAG2Q9Y5P2 127 aa9.17□□□□□ -0.94
CHD3-201ENST00000330494 IGLV3-16A0A075B6K0 115 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 FAM90A27PA6NNH2 459 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 C17orf112F2Z3M2 114 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 DDOSTP39656 456 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 P2RX3P56373 397 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 HBG1P69891 147 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 HBG2P69892 147 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 FZD5Q13467 585 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 CDONQ4KMG0 1287 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 ELFN2Q5R3F8 820 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 PRAMEF5Q5TYX0 476 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 PRAMEF6Q5VXH4 476 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 DPF1Q92782 380 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 KISS1RQ969F8 398 aaPredicted RBP9.16□□□□□ -0.94
CHD3-201ENST00000330494 FBXO17Q96EF6 278 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 FIGNL2A6NMB9 653 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 VAMP5O95183 116 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 MPZL1O95297 269 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 CD160O95971 181 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 ADRB1P08588 477 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 PATE4P0C8F1 98 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 PRPH2P23942 346 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 CCR9P51686 369 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 C20orf196Q8IYI0 205 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 PRSS35Q8N3Z0 413 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 MARC2Q969Z3 335 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 B3GALT5Q9Y2C3 310 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 LRP12Q9Y561 859 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 SPANXN5Q5MJ07 72 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 H3F3CQ6NXT2 135 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 HIST2H3AQ71DI3 136 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 FYTTD1Q96QD9 318 aaKnown RBP9.16□□□□□ -0.94
CHD3-201ENST00000330494 DDOQ99489 341 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 TREM2Q9NZC2 230 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 SSUH2Q9Y2M2 353 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 A0A0A6YYJ9 748 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 A0A1B0GTH9 108 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 OR13C7P0DN81 318 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 PTHLHP12272 177 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 RPS16P62249 146 aaKnown RBP9.16□□□□□ -0.94
CHD3-201ENST00000330494 TMEM182Q6ZP80 229 aaPredicted RBP9.16□□□□□ -0.94
CHD3-201ENST00000330494 FAM58AQ8N1B3 248 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 OR2Z1Q8NG97 314 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 FN3KRPQ9HA64 309 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 FAM212BQ9NTI7 297 aaPredicted RBP9.16□□□□□ -0.94
CHD3-201ENST00000330494 NDRG3Q9UGV2 375 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 PPIL1Q9Y3C6 166 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 YIF1AO95070 293 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 OLFM2O95897 454 aa9.16□□□□□ -0.94
CHD3-201ENST00000330494 FKBP2P26885 142 aaKnown RBP9.16□□□□□ -0.94
CHD3-201ENST00000330494 KIR2DL3P43628 341 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms