RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 CFAP77Q6ZQR2 320 aa14.3□□□□□ -0.12
PDLIM1-201ENST00000329399 RGP1Q92546 391 aaPredicted RBP14.3□□□□□ -0.12
PDLIM1-201ENST00000329399 S100PBPQ96BU1 408 aa14.3□□□□□ -0.12
PDLIM1-201ENST00000329399 HS3ST6Q96QI5 342 aa14.3□□□□□ -0.12
PDLIM1-201ENST00000329399 CCDC32Q9BV29 185 aa14.3□□□□□ -0.12
PDLIM1-201ENST00000329399 ACTR6Q9GZN1 396 aa14.3□□□□□ -0.12
PDLIM1-201ENST00000329399 CLEC4MQ9H2X3 399 aaPredicted RBP14.3□□□□□ -0.12
PDLIM1-201ENST00000329399 SLC24A3Q9HC58 644 aa14.3□□□□□ -0.12
PDLIM1-201ENST00000329399 PNRC2Q9NPJ4 139 aaKnown RBP14.3□□□□□ -0.12
PDLIM1-201ENST00000329399 UPB1Q9UBR1 384 aa14.3□□□□□ -0.12
PDLIM1-201ENST00000329399 NDRG3Q9UGV2 375 aa14.3□□□□□ -0.12
PDLIM1-201ENST00000329399 DHDHQ9UQ10 334 aa14.3□□□□□ -0.12
PDLIM1-201ENST00000329399 PRRC2AP48634 2157 aaKnown RBP14.29□□□□□ -0.12
PDLIM1-201ENST00000329399 ISPDA4D126 451 aa14.29□□□□□ -0.12
PDLIM1-201ENST00000329399 CTDSP2O14595 271 aa14.29□□□□□ -0.12
PDLIM1-201ENST00000329399 FSTP19883 344 aa14.29□□□□□ -0.12
PDLIM1-201ENST00000329399 PSMB1P20618 241 aaKnown RBP14.29□□□□□ -0.12
PDLIM1-201ENST00000329399 CFPP27918 469 aa14.29□□□□□ -0.12
PDLIM1-201ENST00000329399 OTX1P32242 354 aaPredicted RBP14.29□□□□□ -0.12
PDLIM1-201ENST00000329399 INSL4Q14641 139 aa14.29□□□□□ -0.12
PDLIM1-201ENST00000329399 CEACAM16Q2WEN9 425 aa14.29□□□□□ -0.12
PDLIM1-201ENST00000329399 SFRP5Q5T4F7 317 aa14.29□□□□□ -0.12
PDLIM1-201ENST00000329399 Q6ZT83 130 aa14.29□□□□□ -0.12
PDLIM1-201ENST00000329399 ZNF100Q8IYN0 542 aa14.29□□□□□ -0.12
PDLIM1-201ENST00000329399 SLC22A24Q8N4F4 322 aa14.29□□□□□ -0.12
PDLIM1-201ENST00000329399 OR10S1Q8NGN2 331 aa14.29□□□□□ -0.12
PDLIM1-201ENST00000329399 TSEN15Q8WW01 171 aaKnown RBP14.29□□□□□ -0.12
PDLIM1-201ENST00000329399 TMEM106AQ96A25 262 aa14.29□□□□□ -0.12
PDLIM1-201ENST00000329399 PBOV1Q9GZY1 135 aa14.29□□□□□ -0.12
PDLIM1-201ENST00000329399 PPIL3Q9H2H8 161 aaKnown RBP14.29□□□□□ -0.12
PDLIM1-201ENST00000329399 ZNF391Q9UJN7 358 aa14.29□□□□□ -0.12
PDLIM1-201ENST00000329399 V9GY05 133 aa14.29□□□□□ -0.12
PDLIM1-201ENST00000329399 ITPR3Q14573 2671 aa14.29□□□□□ -0.12
PDLIM1-201ENST00000329399 SHISA3A0PJX4 238 aa14.28□□□□□ -0.12
PDLIM1-201ENST00000329399 CRYGSP22914 178 aa14.28□□□□□ -0.12
PDLIM1-201ENST00000329399 ZNF181Q2M3W8 571 aa14.28□□□□□ -0.12
PDLIM1-201ENST00000329399 TSPO2Q5TGU0 170 aa14.28□□□□□ -0.12
PDLIM1-201ENST00000329399 ALKBH2Q6NS38 261 aa14.28□□□□□ -0.12
PDLIM1-201ENST00000329399 SPATC1Q76KD6 591 aa14.28□□□□□ -0.12
PDLIM1-201ENST00000329399 OR13C5Q8NGS8 318 aa14.28□□□□□ -0.12
PDLIM1-201ENST00000329399 PLEKHF2Q9H8W4 249 aa14.28□□□□□ -0.12
PDLIM1-201ENST00000329399 SLC7A10Q9NS82 523 aa14.28□□□□□ -0.12
PDLIM1-201ENST00000329399 GTF2A1LQ9UNN4 478 aa14.28□□□□□ -0.12
PDLIM1-201ENST00000329399 A0A0U1RQV5 110 aa14.27□□□□□ -0.12
PDLIM1-201ENST00000329399 AIPO00170 330 aa14.27□□□□□ -0.12
PDLIM1-201ENST00000329399 RER1O15258 196 aa14.27□□□□□ -0.12
PDLIM1-201ENST00000329399 PIN1P1O15428 100 aa14.27□□□□□ -0.12
PDLIM1-201ENST00000329399 SGCEO43556 437 aa14.27□□□□□ -0.12
PDLIM1-201ENST00000329399 MFGE8Q08431 387 aaPredicted RBP14.27□□□□□ -0.12
PDLIM1-201ENST00000329399 SLC36A2Q495M3 483 aa14.27□□□□□ -0.12
PDLIM1-201ENST00000329399 CEP78Q5JTW2 689 aa14.27□□□□□ -0.12
PDLIM1-201ENST00000329399 FAM27D1Q5T7N8 215 aa14.27□□□□□ -0.12
PDLIM1-201ENST00000329399 C9orf135Q5VTT2 229 aa14.27□□□□□ -0.12
PDLIM1-201ENST00000329399 FBXW9Q5XUX1 488 aa14.27□□□□□ -0.12
PDLIM1-201ENST00000329399 DRAM2Q6UX65 266 aa14.27□□□□□ -0.12
PDLIM1-201ENST00000329399 SEZ6L2Q6UXD5 910 aa14.27□□□□□ -0.12
PDLIM1-201ENST00000329399 LINGO2Q7L985 606 aa14.27□□□□□ -0.12
PDLIM1-201ENST00000329399 SLC16A14Q7RTX9 510 aa14.27□□□□□ -0.12
PDLIM1-201ENST00000329399 LRRC28Q86X40 367 aaPredicted RBP14.27□□□□□ -0.12
PDLIM1-201ENST00000329399 CCDC36Q8IYA8 594 aa14.27□□□□□ -0.12
PDLIM1-201ENST00000329399 PARP16Q8N5Y8 322 aa14.27□□□□□ -0.12
PDLIM1-201ENST00000329399 ZNF433Q8N7K0 673 aaPredicted RBP14.27□□□□□ -0.12
PDLIM1-201ENST00000329399 OR52H1Q8NGJ2 320 aa14.27□□□□□ -0.12
PDLIM1-201ENST00000329399 C10orf35Q96D05 121 aa14.27□□□□□ -0.12
PDLIM1-201ENST00000329399 ABCB9Q9NP78 766 aa14.27□□□□□ -0.12
PDLIM1-201ENST00000329399 SLC22A13Q9Y226 551 aa14.27□□□□□ -0.12
PDLIM1-201ENST00000329399 A0A0G2JK05 382 aa14.26□□□□□ -0.13
PDLIM1-201ENST00000329399 TPPPO94811 219 aa14.26□□□□□ -0.13
PDLIM1-201ENST00000329399 PLAUP00749 431 aa14.26□□□□□ -0.13
PDLIM1-201ENST00000329399 ITGA5P08648 1049 aa14.26□□□□□ -0.13
PDLIM1-201ENST00000329399 CALCBP10092 127 aa14.26□□□□□ -0.13
PDLIM1-201ENST00000329399 COX5BP10606 129 aa14.26□□□□□ -0.13
PDLIM1-201ENST00000329399 HOXB1P14653 301 aaPredicted RBP14.26□□□□□ -0.13
PDLIM1-201ENST00000329399 COX5AP20674 150 aa14.26□□□□□ -0.13
PDLIM1-201ENST00000329399 CCL1P22362 96 aa14.26□□□□□ -0.13
PDLIM1-201ENST00000329399 TALDO1P37837 337 aa14.26□□□□□ -0.13
PDLIM1-201ENST00000329399 TPTEP56180 551 aa14.26□□□□□ -0.13
PDLIM1-201ENST00000329399 FAPQ12884 760 aa14.26□□□□□ -0.13
PDLIM1-201ENST00000329399 TAB1Q15750 504 aa14.26□□□□□ -0.13
PDLIM1-201ENST00000329399 CCDC92Q53HC0 331 aaPredicted RBP14.26□□□□□ -0.13
PDLIM1-201ENST00000329399 IDNKQ5T6J7 187 aa14.26□□□□□ -0.13
PDLIM1-201ENST00000329399 BAIAP2L2Q6UXY1 529 aa14.26□□□□□ -0.13
PDLIM1-201ENST00000329399 ZNF813Q6ZN06 617 aa14.26□□□□□ -0.13
PDLIM1-201ENST00000329399 BHLHA15Q7RTS1 189 aaPredicted RBP14.26□□□□□ -0.13
PDLIM1-201ENST00000329399 WFDC8Q8IUA0 241 aa14.26□□□□□ -0.13
PDLIM1-201ENST00000329399 UBE2J2Q8N2K1 259 aa14.26□□□□□ -0.13
PDLIM1-201ENST00000329399 ZNF283Q8N7M2 679 aa14.26□□□□□ -0.13
PDLIM1-201ENST00000329399 GDPD1Q8N9F7 314 aa14.26□□□□□ -0.13
PDLIM1-201ENST00000329399 MINDY2Q8NBR6 621 aa14.26□□□□□ -0.13
PDLIM1-201ENST00000329399 FOXRED1Q96CU9 486 aaPredicted RBP14.26□□□□□ -0.13
PDLIM1-201ENST00000329399 DIRAS2Q96HU8 199 aa14.26□□□□□ -0.13
PDLIM1-201ENST00000329399 PLEK2Q9NYT0 353 aa14.26□□□□□ -0.13
PDLIM1-201ENST00000329399 MALT1Q9UDY8 824 aa14.26□□□□□ -0.13
PDLIM1-201ENST00000329399 FBXL3Q9UKT7 428 aa14.26□□□□□ -0.13
PDLIM1-201ENST00000329399 A0A1B0GVI7 797 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 LOC107986453A0A1B0GWG9 222 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 OR6C6A6NF89 314 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 IFITM5A6NNB3 132 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 TTRP02766 147 aa14.25□□□□□ -0.13
PDLIM1-201ENST00000329399 CD37P11049 281 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms