RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 HCRTR1O43613 425 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 GALR1P47211 349 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 CSNK1DP48730 415 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 PDCD1Q15116 288 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 DHRS11Q6UWP2 260 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 PSENENQ9NZ42 101 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 KIAA1456Q9P272 454 aa7.2□□□□□ -1.26
CIITA-201ENST00000324288 C4orf47A7E2U8 309 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 POU2F2P09086 479 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 HIST1H3AP68431 136 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 NCMAPQ5T1S8 102 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 C20orf196Q8IYI0 205 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 OR2M7Q8NG81 312 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 OR5A2Q8NGI9 324 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 SLC25A21Q9BQT8 299 aaPredicted RBP7.19□□□□□ -1.26
CIITA-201ENST00000324288 BET1LQ9NYM9 111 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 C5P01031 1676 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 BLACEA4D250 179 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 MMP11P24347 488 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 TEKQ02763 1124 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 OLIG1Q8TAK6 271 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 TNFRSF19Q9NS68 423 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 PRR13Q9NZ81 148 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 FZR1Q9UM11 496 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 COA3Q9Y2R0 106 aaPredicted RBP7.19□□□□□ -1.26
CIITA-201ENST00000324288 CEBPDP49716 269 aaPredicted RBP7.19□□□□□ -1.26
CIITA-201ENST00000324288 PSMB2P49721 201 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 TEX261Q6UWH6 196 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 MYPOPQ86VE0 399 aaPredicted RBP7.19□□□□□ -1.26
CIITA-201ENST00000324288 RDH5Q92781 318 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 SARGQ9BW04 601 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 HINT3Q9NQE9 182 aaKnown RBP7.19□□□□□ -1.26
CIITA-201ENST00000324288 U3KQ87 197 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 CCDC187A0A096LP49 1063 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 OLFM2O95897 454 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 ATXN1LP0C7T5 689 aaKnown RBP7.19□□□□□ -1.26
CIITA-201ENST00000324288 GUK1Q16774 197 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 ZNF573Q86YE8 665 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 FUNDC1Q8IVP5 155 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 DBX1A6NMT0 343 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 H3BVH4 76 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 ZNF749O43361 778 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 RAB13P51153 203 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 PIGPP57054 158 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 DHODHQ02127 395 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 SPATA46Q5T0L3 261 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 ZNF595Q8IYB9 648 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 ZNF740Q8NDX6 193 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 OR52N1Q8NH53 320 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 OR51F2Q8NH61 342 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 UCN3Q969E3 161 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 MEX3AA1L020 520 aaKnown RBP7.19□□□□□ -1.26
CIITA-201ENST00000324288 FBLL1A6NHQ2 334 aaKnown RBP7.19□□□□□ -1.26
CIITA-201ENST00000324288 GPR37O15354 613 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 SLC25A35Q3KQZ1 300 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 LPCAT3Q6P1A2 487 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 CDC20BQ86Y33 519 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 KLHDC9Q8NEP7 349 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 OR8D4Q8NGM9 314 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 DYNC2LI1Q8TCX1 351 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 NEURL3Q96EH8 262 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 OPALINQ96PE5 141 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 KLK4Q9Y5K2 254 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 ACAA1P09110 424 aaPredicted RBP7.19□□□□□ -1.26
CIITA-201ENST00000324288 TEAD1P28347 426 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 APH1AQ96BI3 265 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 PCED1AQ9H1Q7 454 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 ISG20L2Q9H9L3 353 aaKnown RBP7.19□□□□□ -1.26
CIITA-201ENST00000324288 ING1Q9UK53 422 aaPredicted RBP7.19□□□□□ -1.26
CIITA-201ENST00000324288 C5orf49A4QMS7 147 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 K7ESM1 405 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 ZNF85Q03923 595 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 Q499Y3 187 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 SLC39A7Q92504 469 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 C8orf44Q96CB5 159 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 C1QTNF3Q9BXJ4 246 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 NUDT19A8MXV4 375 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 CD37P11049 281 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 TCN2P20062 427 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 GJA4P35212 333 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 CCSMST1Q4G0I0 132 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 MIDNQ504T8 468 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 C1orf140Q5VVS0 124 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 SLC39A11Q8N1S5 342 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 IKZF5Q9H5V7 419 aa7.19□□□□□ -1.26
CIITA-201ENST00000324288 SPP1P10451 314 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 CR2P20023 1033 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 FAM78BQ5VT40 261 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 PLPPR2Q96GM1 343 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 TECTBQ96PL2 329 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 HES7Q9BYE0 225 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 SCPEP1Q9HB40 452 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 POMT1Q9Y6A1 747 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 HELTA6NFD8 242 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 ZNF195O14628 629 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 TNFRSF4P43489 277 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 PRDX1Q06830 199 aaKnown RBP7.18□□□□□ -1.26
CIITA-201ENST00000324288 VASH2Q86V25 355 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 OR2L13Q8N349 312 aa7.18□□□□□ -1.26
CIITA-201ENST00000324288 GPX8Q8TED1 209 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms