RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 RNF121Q9H920 327 aa15.56■□□□□ 0.08
RAB39A-201ENST00000320578 CGGBP1Q9UFW8 167 aaPredicted RBP15.56■□□□□ 0.08
RAB39A-201ENST00000320578 MRPS7Q9Y2R9 242 aaKnown RBP15.56■□□□□ 0.08
RAB39A-201ENST00000320578 RBMX2Q9Y388 322 aaKnown RBP15.56■□□□□ 0.08
RAB39A-201ENST00000320578 C5orf63A6NC05 138 aa15.55■□□□□ 0.08
RAB39A-201ENST00000320578 LANCL1O43813 399 aa15.55■□□□□ 0.08
RAB39A-201ENST00000320578 PATE4P0C8F1 98 aa15.55■□□□□ 0.08
RAB39A-201ENST00000320578 FAM157BP0CG42 384 aa15.55■□□□□ 0.08
RAB39A-201ENST00000320578 TAS2R20P59543 309 aa15.55■□□□□ 0.08
RAB39A-201ENST00000320578 DYRK1AQ13627 763 aa15.55■□□□□ 0.08
RAB39A-201ENST00000320578 C11orf91Q3C1V1 193 aa15.55■□□□□ 0.08
RAB39A-201ENST00000320578 SNAI3Q3KNW1 292 aa15.55■□□□□ 0.08
RAB39A-201ENST00000320578 ZNF57Q68EA5 555 aaPredicted RBP15.55■□□□□ 0.08
RAB39A-201ENST00000320578 TMEM53Q6P2H8 277 aa15.55■□□□□ 0.08
RAB39A-201ENST00000320578 FAM214BQ7L5A3 538 aa15.55■□□□□ 0.08
RAB39A-201ENST00000320578 CCDC36Q8IYA8 594 aa15.55■□□□□ 0.08
RAB39A-201ENST00000320578 DTX3Q8N9I9 347 aa15.55■□□□□ 0.08
RAB39A-201ENST00000320578 OR1K1Q8NGR3 316 aa15.55■□□□□ 0.08
RAB39A-201ENST00000320578 CHAC2Q8WUX2 184 aa15.55■□□□□ 0.08
RAB39A-201ENST00000320578 BOD1Q96IK1 185 aa15.55■□□□□ 0.08
RAB39A-201ENST00000320578 CHST5Q9GZS9 411 aa15.55■□□□□ 0.08
RAB39A-201ENST00000320578 CNTD2Q9H8S5 307 aa15.55■□□□□ 0.08
RAB39A-201ENST00000320578 PRSS50Q9UI38 385 aa15.55■□□□□ 0.08
RAB39A-201ENST00000320578 XRCC2O43543 280 aa15.54■□□□□ 0.08
RAB39A-201ENST00000320578 PDGFAP04085 211 aa15.54■□□□□ 0.08
RAB39A-201ENST00000320578 LCATP04180 440 aa15.54■□□□□ 0.08
RAB39A-201ENST00000320578 DGCR2P98153 550 aa15.54■□□□□ 0.08
RAB39A-201ENST00000320578 SFRP5Q5T4F7 317 aa15.54■□□□□ 0.08
RAB39A-201ENST00000320578 CADM3Q8N126 398 aa15.54■□□□□ 0.08
RAB39A-201ENST00000320578 DEDD2Q8WXF8 326 aa15.54■□□□□ 0.08
RAB39A-201ENST00000320578 BCL2L2Q92843 193 aaPredicted RBP15.54■□□□□ 0.08
RAB39A-201ENST00000320578 SPSB4Q96A44 273 aa15.54■□□□□ 0.08
RAB39A-201ENST00000320578 TRIB1Q96RU8 372 aa15.54■□□□□ 0.08
RAB39A-201ENST00000320578 RAB22AQ9UL26 194 aa15.54■□□□□ 0.08
RAB39A-201ENST00000320578 CIB4A0PJX0 185 aa15.54■□□□□ 0.08
RAB39A-201ENST00000320578 GGT3PA6NGU5 568 aa15.54■□□□□ 0.08
RAB39A-201ENST00000320578 K7ENP7 123 aa15.54■□□□□ 0.08
RAB39A-201ENST00000320578 SSX4O60224 188 aa15.54■□□□□ 0.08
RAB39A-201ENST00000320578 ECDO95905 644 aaPredicted RBP15.54■□□□□ 0.08
RAB39A-201ENST00000320578 IL18BPO95998 194 aa15.54■□□□□ 0.08
RAB39A-201ENST00000320578 ZNF93P35789 620 aaPredicted RBP15.54■□□□□ 0.08
RAB39A-201ENST00000320578 FOXG1P55316 489 aaPredicted RBP15.54■□□□□ 0.08
RAB39A-201ENST00000320578 HGFACQ04756 655 aa15.54■□□□□ 0.08
RAB39A-201ENST00000320578 NSUN5P2Q63ZY6 315 aa15.54■□□□□ 0.08
RAB39A-201ENST00000320578 INO80CQ6PI98 192 aaPredicted RBP15.54■□□□□ 0.08
RAB39A-201ENST00000320578 TFAP2EQ6VUC0 442 aa15.54■□□□□ 0.08
RAB39A-201ENST00000320578 CPEB3Q8NE35 698 aaKnown RBP15.54■□□□□ 0.08
RAB39A-201ENST00000320578 SEMA6DQ8NFY4 1073 aa15.54■□□□□ 0.08
RAB39A-201ENST00000320578 OR4D6Q8NGJ1 314 aa15.54■□□□□ 0.08
RAB39A-201ENST00000320578 ENKURQ8TC29 256 aa15.54■□□□□ 0.08
RAB39A-201ENST00000320578 FCAMRQ8WWV6 532 aa15.54■□□□□ 0.08
RAB39A-201ENST00000320578 NANOS1Q8WY41 292 aaKnown RBP15.54■□□□□ 0.08
RAB39A-201ENST00000320578 AKAP1Q92667 903 aaKnown RBP eCLIP15.54■□□□□ 0.08
RAB39A-201ENST00000320578 REEP6Q96HR9 211 aa15.54■□□□□ 0.08
RAB39A-201ENST00000320578 TNRC6AQ8NDV7 1962 aaKnown RBP15.54■□□□□ 0.08
RAB39A-201ENST00000320578 LINC00854A0A1B0GVQ3 168 aa15.53■□□□□ 0.08
RAB39A-201ENST00000320578 SCGNO76038 276 aa15.53■□□□□ 0.08
RAB39A-201ENST00000320578 UBBP0CG47 229 aa15.53■□□□□ 0.08
RAB39A-201ENST00000320578 HOXB1P14653 301 aaPredicted RBP15.53■□□□□ 0.08
RAB39A-201ENST00000320578 PTGER4P35408 488 aa15.53■□□□□ 0.08
RAB39A-201ENST00000320578 KIR2DL3P43628 341 aa15.53■□□□□ 0.08
RAB39A-201ENST00000320578 EFNB2P52799 333 aa15.53■□□□□ 0.08
RAB39A-201ENST00000320578 QRFPP83859 136 aa15.53■□□□□ 0.08
RAB39A-201ENST00000320578 GFOD2Q3B7J2 385 aa15.53■□□□□ 0.08
RAB39A-201ENST00000320578 ACSF3Q4G176 576 aaPredicted RBP15.53■□□□□ 0.08
RAB39A-201ENST00000320578 ZBTB37Q5TC79 503 aa15.53■□□□□ 0.08
RAB39A-201ENST00000320578 OR2W3Q7Z3T1 314 aa15.53■□□□□ 0.08
RAB39A-201ENST00000320578 TOMM5Q8N4H5 51 aa15.53■□□□□ 0.08
RAB39A-201ENST00000320578 PHF21AQ96BD5 680 aa15.53■□□□□ 0.08
RAB39A-201ENST00000320578 NEDD4LQ96PU5 975 aa15.53■□□□□ 0.08
RAB39A-201ENST00000320578 NUDT16L1Q9BRJ7 211 aaKnown RBP15.53■□□□□ 0.08
RAB39A-201ENST00000320578 NEK6Q9HC98 313 aa15.53■□□□□ 0.08
RAB39A-201ENST00000320578 B3GNT2Q9NY97 397 aa15.53■□□□□ 0.08
RAB39A-201ENST00000320578 GHRLQ9UBU3 117 aa15.53■□□□□ 0.08
RAB39A-201ENST00000320578 LHX6Q9UPM6 363 aa15.53■□□□□ 0.08
RAB39A-201ENST00000320578 CACNG2Q9Y698 323 aa15.53■□□□□ 0.08
RAB39A-201ENST00000320578 IGKV1-9A0A0C4DH69 117 aa15.52■□□□□ 0.08
RAB39A-201ENST00000320578 CENPXA8MT69 81 aa15.52■□□□□ 0.08
RAB39A-201ENST00000320578 WISP2O76076 250 aa15.52■□□□□ 0.08
RAB39A-201ENST00000320578 ALDH3B1P43353 468 aa15.52■□□□□ 0.08
RAB39A-201ENST00000320578 AP3S2P59780 193 aa15.52■□□□□ 0.08
RAB39A-201ENST00000320578 TGFBR3Q03167 851 aa15.52■□□□□ 0.08
RAB39A-201ENST00000320578 RIPPLY1Q0D2K3 151 aa15.52■□□□□ 0.08
RAB39A-201ENST00000320578 PLA2G7Q13093 441 aa15.52■□□□□ 0.08
RAB39A-201ENST00000320578 GPR176Q14439 515 aa15.52■□□□□ 0.08
RAB39A-201ENST00000320578 FAM189A2Q15884 450 aa15.52■□□□□ 0.08
RAB39A-201ENST00000320578 KRTCAP3Q53RY4 240 aa15.52■□□□□ 0.08
RAB39A-201ENST00000320578 RAB12Q6IQ22 244 aa15.52■□□□□ 0.08
RAB39A-201ENST00000320578 ZNF554Q86TJ5 538 aa15.52■□□□□ 0.08
RAB39A-201ENST00000320578 IZUMO1Q8IYV9 350 aa15.52■□□□□ 0.08
RAB39A-201ENST00000320578 OR6K3Q8NGY3 331 aa15.52■□□□□ 0.08
RAB39A-201ENST00000320578 GPR137Q96N19 417 aa15.52■□□□□ 0.08
RAB39A-201ENST00000320578 C12orf49Q9H741 205 aa15.52■□□□□ 0.08
RAB39A-201ENST00000320578 NPAP1Q9NZP6 1156 aa15.52■□□□□ 0.08
RAB39A-201ENST00000320578 PIGLQ9Y2B2 252 aa15.52■□□□□ 0.08
RAB39A-201ENST00000320578 A0A096LPE4 126 aa15.52■□□□□ 0.07
RAB39A-201ENST00000320578 FAM240BA0A1B0GVZ2 78 aa15.52■□□□□ 0.07
RAB39A-201ENST00000320578 A0A1W2PPZ6 126 aa15.52■□□□□ 0.07
RAB39A-201ENST00000320578 SULT1C2O00338 296 aa15.52■□□□□ 0.07
RAB39A-201ENST00000320578 RRP8O43159 456 aaKnown RBP15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms