RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 RAB3CQ96E17 227 aa13.25□□□□□ -0.29
TFE3-201ENST00000315869 SMIM3Q9BZL3 60 aa13.25□□□□□ -0.29
TFE3-201ENST00000315869 PBOV1Q9GZY1 135 aa13.25□□□□□ -0.29
TFE3-201ENST00000315869 MRPS28Q9Y2Q9 187 aaKnown RBP13.25□□□□□ -0.29
TFE3-201ENST00000315869 CLRN1P58418 232 aa13.25□□□□□ -0.29
TFE3-201ENST00000315869 ZNF260Q3ZCT1 412 aa13.25□□□□□ -0.29
TFE3-201ENST00000315869 LCN10Q6JVE6 187 aa13.25□□□□□ -0.29
TFE3-201ENST00000315869 TMEM104Q8NE00 496 aa13.25□□□□□ -0.29
TFE3-201ENST00000315869 G6PC2Q9NQR9 355 aa13.25□□□□□ -0.29
TFE3-201ENST00000315869 ZNF701Q9NV72 531 aaPredicted RBP13.25□□□□□ -0.29
TFE3-201ENST00000315869 MYO7BQ6PIF6 2116 aa13.25□□□□□ -0.29
TFE3-201ENST00000315869 COL4A2P08572 1712 aa13.25□□□□□ -0.29
TFE3-201ENST00000315869 RALGAPA1Q6GYQ0 2036 aa13.25□□□□□ -0.29
TFE3-201ENST00000315869 TMEM218A2RU14 115 aa13.25□□□□□ -0.29
TFE3-201ENST00000315869 OR6C76A6NM76 312 aa13.25□□□□□ -0.29
TFE3-201ENST00000315869 ZNF878C9JN71 531 aa13.25□□□□□ -0.29
TFE3-201ENST00000315869 ABCD4O14678 606 aa13.25□□□□□ -0.29
TFE3-201ENST00000315869 SOCS1O15524 211 aa13.25□□□□□ -0.29
TFE3-201ENST00000315869 ZNF354AO60765 605 aaPredicted RBP13.25□□□□□ -0.29
TFE3-201ENST00000315869 NME2P22392 152 aa13.25□□□□□ -0.29
TFE3-201ENST00000315869 SCRN3Q0VDG4 424 aa13.25□□□□□ -0.29
TFE3-201ENST00000315869 UNC119Q13432 240 aa13.25□□□□□ -0.29
TFE3-201ENST00000315869 H1FNTQ75WM6 255 aaPredicted RBP13.25□□□□□ -0.29
TFE3-201ENST00000315869 BAP18Q8IXM2 172 aa13.25□□□□□ -0.29
TFE3-201ENST00000315869 MITD1Q8WV92 249 aa13.25□□□□□ -0.29
TFE3-201ENST00000315869 CNTNAP3BQ96NU0 1288 aa13.25□□□□□ -0.29
TFE3-201ENST00000315869 ZNF629Q9UEG4 869 aaPredicted RBP13.25□□□□□ -0.29
TFE3-201ENST00000315869 MMACHCQ9Y4U1 282 aa13.25□□□□□ -0.29
TFE3-201ENST00000315869 A0A1W2PNR3 127 aa13.24□□□□□ -0.29
TFE3-201ENST00000315869 DXOO77932 396 aaKnown RBP13.24□□□□□ -0.29
TFE3-201ENST00000315869 SCGB1D2O95969 90 aa13.24□□□□□ -0.29
TFE3-201ENST00000315869 CD8AP01732 235 aa13.24□□□□□ -0.29
TFE3-201ENST00000315869 SERPINA5P05154 406 aa13.24□□□□□ -0.29
TFE3-201ENST00000315869 CXCL12P48061 93 aa13.24□□□□□ -0.29
TFE3-201ENST00000315869 SGCAQ16586 387 aa13.24□□□□□ -0.29
TFE3-201ENST00000315869 OR5H2Q8NGV7 314 aa13.24□□□□□ -0.29
TFE3-201ENST00000315869 GUCD1Q96NT3 240 aa13.24□□□□□ -0.29
TFE3-201ENST00000315869 VN1R1Q9GZP7 353 aa13.24□□□□□ -0.29
TFE3-201ENST00000315869 SIT1Q9Y3P8 196 aa13.24□□□□□ -0.29
TFE3-201ENST00000315869 A6NIZ1 184 aa13.24□□□□□ -0.29
TFE3-201ENST00000315869 EFSO43281 561 aa13.24□□□□□ -0.29
TFE3-201ENST00000315869 DAP3P51398 398 aaKnown RBP13.24□□□□□ -0.29
TFE3-201ENST00000315869 RAP1BP61224 184 aa13.24□□□□□ -0.29
TFE3-201ENST00000315869 RAP1AP62834 184 aa13.24□□□□□ -0.29
TFE3-201ENST00000315869 CSNK2A1P68400 391 aaPredicted RBP13.24□□□□□ -0.29
TFE3-201ENST00000315869 SRSF3P84103 164 aaKnown RBP13.24□□□□□ -0.29
TFE3-201ENST00000315869 CSNK2A3Q8NEV1 391 aa13.24□□□□□ -0.29
TFE3-201ENST00000315869 EDAQ92838 391 aa13.24□□□□□ -0.29
TFE3-201ENST00000315869 S100A13Q99584 98 aa13.24□□□□□ -0.29
TFE3-201ENST00000315869 ASPMQ8IZT6 3477 aa13.24□□□□□ -0.29
TFE3-201ENST00000315869 A0A1B0GTI1 187 aa13.23□□□□□ -0.29
TFE3-201ENST00000315869 VSTM2BA6NLU5 285 aa13.23□□□□□ -0.29
TFE3-201ENST00000315869 MPTX1A8MV57 137 aa13.23□□□□□ -0.29
TFE3-201ENST00000315869 IGLV3-19P01714 112 aa13.23□□□□□ -0.29
TFE3-201ENST00000315869 IGKV3-11P04433 115 aa13.23□□□□□ -0.29
TFE3-201ENST00000315869 CRHP06850 196 aa13.23□□□□□ -0.29
TFE3-201ENST00000315869 DCAF7P61962 342 aa13.23□□□□□ -0.29
TFE3-201ENST00000315869 FAM57BQ71RH2 274 aa13.23□□□□□ -0.29
TFE3-201ENST00000315869 BHLHE23Q8NDY6 225 aa13.23□□□□□ -0.29
TFE3-201ENST00000315869 OR5AP2Q8NGF4 316 aa13.23□□□□□ -0.29
TFE3-201ENST00000315869 OR1L3Q8NH93 324 aa13.23□□□□□ -0.29
TFE3-201ENST00000315869 STOML3Q8TAV4 291 aa13.23□□□□□ -0.29
TFE3-201ENST00000315869 TMEM59Q9BXS4 323 aa13.23□□□□□ -0.29
TFE3-201ENST00000315869 ASH2LQ9UBL3 628 aa13.23□□□□□ -0.29
TFE3-201ENST00000315869 BCAT2O15382 392 aaPredicted RBP13.23□□□□□ -0.29
TFE3-201ENST00000315869 TTRP02766 147 aa13.23□□□□□ -0.29
TFE3-201ENST00000315869 CD74P04233 296 aa13.23□□□□□ -0.29
TFE3-201ENST00000315869 IGFBP3P17936 291 aaPredicted RBP13.23□□□□□ -0.29
TFE3-201ENST00000315869 CHAF1BQ13112 559 aa13.23□□□□□ -0.29
TFE3-201ENST00000315869 RBM39Q14498 530 aaKnown RBP13.23□□□□□ -0.29
TFE3-201ENST00000315869 GLI4P10075 376 aa13.23□□□□□ -0.29
TFE3-201ENST00000315869 FOLR1P15328 257 aa13.23□□□□□ -0.29
TFE3-201ENST00000315869 AKR1C3P42330 323 aa13.23□□□□□ -0.29
TFE3-201ENST00000315869 OR3A4PP47883 348 aa13.23□□□□□ -0.29
TFE3-201ENST00000315869 FOXF1Q12946 379 aa13.23□□□□□ -0.29
TFE3-201ENST00000315869 FAM69BQ5VUD6 431 aa13.23□□□□□ -0.29
TFE3-201ENST00000315869 SLC25A45Q8N413 288 aa13.23□□□□□ -0.29
TFE3-201ENST00000315869 GPR84Q9NQS5 396 aa13.23□□□□□ -0.29
TFE3-201ENST00000315869 LHX6Q9UPM6 363 aa13.23□□□□□ -0.29
TFE3-201ENST00000315869 PRELID3BQ9Y3B1 194 aa13.23□□□□□ -0.29
TFE3-201ENST00000315869 A0A1B0GV50 99 aa13.22□□□□□ -0.29
TFE3-201ENST00000315869 TSPAN2O60636 221 aa13.22□□□□□ -0.29
TFE3-201ENST00000315869 ACTL6AO96019 429 aa13.22□□□□□ -0.29
TFE3-201ENST00000315869 GUCA1AP43080 201 aaPredicted RBP13.22□□□□□ -0.29
TFE3-201ENST00000315869 HNRNPKP61978 463 aaKnown RBP eCLIP13.22□□□□□ -0.29
TFE3-201ENST00000315869 MICBQ29980 383 aa13.22□□□□□ -0.29
TFE3-201ENST00000315869 LDLRAD3Q86YD5 345 aa13.22□□□□□ -0.29
TFE3-201ENST00000315869 WDFY1Q8IWB7 410 aa13.22□□□□□ -0.29
TFE3-201ENST00000315869 PAQR4Q8N4S7 273 aaPredicted RBP13.22□□□□□ -0.29
TFE3-201ENST00000315869 EIF4E3Q8N5X7 224 aaKnown RBP13.22□□□□□ -0.29
TFE3-201ENST00000315869 OR51T1Q8NGJ9 327 aa13.22□□□□□ -0.29
TFE3-201ENST00000315869 ST7LQ8TDW4 575 aa13.22□□□□□ -0.29
TFE3-201ENST00000315869 RNF141Q8WVD5 230 aa13.22□□□□□ -0.29
TFE3-201ENST00000315869 AQP3Q92482 292 aa13.22□□□□□ -0.29
TFE3-201ENST00000315869 TLNRD1Q9H1K6 362 aa13.22□□□□□ -0.29
TFE3-201ENST00000315869 SMOC1Q9H4F8 434 aa13.22□□□□□ -0.29
TFE3-201ENST00000315869 EHFQ9NZC4 300 aa13.22□□□□□ -0.29
TFE3-201ENST00000315869 WIPF3A6NGB9 483 aa13.22□□□□□ -0.29
TFE3-201ENST00000315869 F5H5K5 113 aa13.22□□□□□ -0.29
TFE3-201ENST00000315869 MS4A18H0YCH9 400 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms