RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 TNFSF12O43508 249 aa5.51□□□□□ -1.53
PRKDC-201ENST00000314191 VHLLQ6RSH7 139 aa5.51□□□□□ -1.53
PRKDC-201ENST00000314191 SLC38A9Q8NBW4 561 aa5.51□□□□□ -1.53
PRKDC-201ENST00000314191 PAQR8Q8TEZ7 354 aa5.51□□□□□ -1.53
PRKDC-201ENST00000314191 ZNF2Q9BSG1 426 aaPredicted RBP5.51□□□□□ -1.53
PRKDC-201ENST00000314191 FBXO24O75426 580 aa5.51□□□□□ -1.53
PRKDC-201ENST00000314191 TMUB2Q71RG4 321 aa5.51□□□□□ -1.53
PRKDC-201ENST00000314191 SLC26A10Q8NG04 563 aa5.51□□□□□ -1.53
PRKDC-201ENST00000314191 VRK1Q99986 396 aaPredicted RBP5.51□□□□□ -1.53
PRKDC-201ENST00000314191 MARVELD1Q9BSK0 173 aa5.51□□□□□ -1.53
PRKDC-201ENST00000314191 ZMIZ1Q9ULJ6 1067 aa5.51□□□□□ -1.53
PRKDC-201ENST00000314191 CKAP5Q14008 2032 aa5.51□□□□□ -1.53
PRKDC-201ENST00000314191 CTAG2O75638 210 aa5.51□□□□□ -1.53
PRKDC-201ENST00000314191 NDUFB6O95139 128 aa5.51□□□□□ -1.53
PRKDC-201ENST00000314191 CAMLGP49069 296 aa5.51□□□□□ -1.53
PRKDC-201ENST00000314191 TAS2R46P59540 309 aa5.51□□□□□ -1.53
PRKDC-201ENST00000314191 RELL2Q8NC24 303 aaPredicted RBP5.51□□□□□ -1.53
PRKDC-201ENST00000314191 OR2AK2Q8NG84 335 aa5.51□□□□□ -1.53
PRKDC-201ENST00000314191 OR1S1Q8NH92 325 aa5.51□□□□□ -1.53
PRKDC-201ENST00000314191 A0A1B0GUH1 482 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 PCP4L1A6NKN8 68 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 MC2RQ01718 297 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 KISS1RQ969F8 398 aaPredicted RBP5.5□□□□□ -1.53
PRKDC-201ENST00000314191 DNAJB11Q9UBS4 358 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 ZNF780AO75290 641 aaPredicted RBP5.5□□□□□ -1.53
PRKDC-201ENST00000314191 GRPP07492 148 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 RAB1AP62820 205 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 SSPNQ14714 243 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 SECTM1Q8WVN6 248 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 PGLYRP3Q96LB9 341 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 PCDHGA9Q9Y5G4 932 aaKnown RBP5.5□□□□□ -1.53
PRKDC-201ENST00000314191 ZNF407Q9C0G0 2248 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 A0A0J9YW62 118 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 IGLV3-19P01714 112 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 TMIGD3P0DMS9 266 aaPredicted RBP5.5□□□□□ -1.53
PRKDC-201ENST00000314191 PRKACAP17612 351 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 DEFB109BQ30KR1 87 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 LINC01590Q5TEZ4 76 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 ASB5Q8WWX0 329 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 PILRBQ9UKJ0 227 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 NUP205Q92621 2012 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 GSTP1P09211 210 aaKnown RBP5.5□□□□□ -1.53
PRKDC-201ENST00000314191 OR5H8P0DN80 308 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 ADH6P28332 368 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 MEOX1P50221 254 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 PHLDA2Q53GA4 152 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 ZNF362Q5T0B9 420 aaPredicted RBP5.5□□□□□ -1.53
PRKDC-201ENST00000314191 FAM109AQ8N4B1 249 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 SUMF1Q8NBK3 374 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 OR51F2Q8NH61 342 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 ZNF275Q9NSD4 429 aaPredicted RBP5.5□□□□□ -1.53
PRKDC-201ENST00000314191 LOXHD1Q8IVV2 1947 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 IFNA5P01569 189 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 SELENOPP49908 381 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 ZNF574Q6ZN55 896 aaPredicted RBP5.5□□□□□ -1.53
PRKDC-201ENST00000314191 GCNT2Q8N0V5 402 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 GVQW1Q8N7I0 195 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 TMEM229BQ8NBD8 167 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 MFRPQ9BY79 579 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 TMEM272A0A1B0GTI8 110 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 TXNDC12O95881 172 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 HRH1P35367 487 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 RNF133Q8WVZ7 376 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 WDR89Q96FK6 387 aaPredicted RBP5.5□□□□□ -1.53
PRKDC-201ENST00000314191 IER2Q9BTL4 223 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 HINT2Q9BX68 163 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 LUZP4Q9P127 313 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 MTFP1Q9UDX5 166 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 CEP250Q9BV73 2442 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 IGLV1-36A0A0B4J1U3 117 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 H3BUI4 141 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 NRASP01111 189 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 LUMP51884 338 aaPredicted RBP5.5□□□□□ -1.53
PRKDC-201ENST00000314191 ZXDAP98168 799 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 SLC25A26Q70HW3 274 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 SPAG16Q8N0X2 631 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 ZNF687Q8N1G0 1237 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 RDH5Q92781 318 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 HPXP02790 462 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 FAM157BP0CG42 384 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 CXCL3P19876 107 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 SERPINF1P36955 418 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 RBM39Q14498 530 aaKnown RBP5.5□□□□□ -1.53
PRKDC-201ENST00000314191 HES3Q5TGS1 186 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 C6orf201Q7Z4U5 140 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 OR5L1Q8NGL2 311 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 OR5M9Q8NGP3 310 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 CTDSPLO15194 276 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 PNPP00491 289 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 EXOSC2Q13868 293 aaKnown RBP5.5□□□□□ -1.53
PRKDC-201ENST00000314191 OR1F12Q8NHA8 337 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 XRCC2O43543 280 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 TIMM8AO60220 97 aaPredicted RBP5.5□□□□□ -1.53
PRKDC-201ENST00000314191 HLA-HP01893 362 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 GLDNQ6ZMI3 551 aaPredicted RBP5.5□□□□□ -1.53
PRKDC-201ENST00000314191 NLRC3Q7RTR2 1065 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 LRRTM1Q86UE6 522 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 OR8B12Q8NGG6 310 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 FAM173AQ9BQD7 235 aa5.5□□□□□ -1.53
PRKDC-201ENST00000314191 CNTD2Q9H8S5 307 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms