RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 LPAR5Q9H1C0 372 aa12.3□□□□□ -0.44
MKS1-201ENST00000313863 TLNRD1Q9H1K6 362 aa12.3□□□□□ -0.44
MKS1-201ENST00000313863 FN3KRPQ9HA64 309 aa12.3□□□□□ -0.44
MKS1-201ENST00000313863 SRPK3Q9UPE1 567 aa12.3□□□□□ -0.44
MKS1-201ENST00000313863 RPL35P42766 123 aaKnown RBP12.3□□□□□ -0.44
MKS1-201ENST00000313863 ARL4DP49703 201 aa12.3□□□□□ -0.44
MKS1-201ENST00000313863 CAV2P51636 162 aa12.3□□□□□ -0.44
MKS1-201ENST00000313863 GFERP55789 205 aa12.3□□□□□ -0.44
MKS1-201ENST00000313863 GLIPR1L1Q6UWM5 242 aa12.3□□□□□ -0.44
MKS1-201ENST00000313863 CLEC18BQ6UXF7 455 aa12.3□□□□□ -0.44
MKS1-201ENST00000313863 CBLN2Q8IUK8 224 aa12.3□□□□□ -0.44
MKS1-201ENST00000313863 CARFQ8N187 725 aa12.3□□□□□ -0.44
MKS1-201ENST00000313863 OR2AJ1Q8NGZ0 328 aa12.3□□□□□ -0.44
MKS1-201ENST00000313863 NUBPLQ8TB37 319 aa12.3□□□□□ -0.44
MKS1-201ENST00000313863 C11orf40Q8WZ69 217 aa12.3□□□□□ -0.44
MKS1-201ENST00000313863 SMIM8Q96KF7 97 aa12.3□□□□□ -0.44
MKS1-201ENST00000313863 TMEM59Q9BXS4 323 aa12.3□□□□□ -0.44
MKS1-201ENST00000313863 PTGES2Q9H7Z7 377 aa12.3□□□□□ -0.44
MKS1-201ENST00000313863 METTL8Q9H825 291 aaKnown RBP12.3□□□□□ -0.44
MKS1-201ENST00000313863 B3GALT5Q9Y2C3 310 aa12.3□□□□□ -0.44
MKS1-201ENST00000313863 PHF3Q92576 2039 aaKnown RBP12.29□□□□□ -0.44
MKS1-201ENST00000313863 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.29□□□□□ -0.44
MKS1-201ENST00000313863 LOC101059948A0A1B0GTJ6 334 aa12.29□□□□□ -0.44
MKS1-201ENST00000313863 A0A1W2PPC4 97 aa12.29□□□□□ -0.44
MKS1-201ENST00000313863 FIGNL2A6NMB9 653 aa12.29□□□□□ -0.44
MKS1-201ENST00000313863 C17orf51A8MQB3 221 aa12.29□□□□□ -0.44
MKS1-201ENST00000313863 ZNF878C9JN71 531 aa12.29□□□□□ -0.44
MKS1-201ENST00000313863 MBTPS2O43462 519 aa12.29□□□□□ -0.44
MKS1-201ENST00000313863 MPIG6BO95866 241 aa12.29□□□□□ -0.44
MKS1-201ENST00000313863 CSTBP04080 98 aaKnown RBP12.29□□□□□ -0.44
MKS1-201ENST00000313863 GIMD1P0DJR0 217 aa12.29□□□□□ -0.44
MKS1-201ENST00000313863 LAP3P28838 519 aa12.29□□□□□ -0.44
MKS1-201ENST00000313863 OR3A2P47893 321 aa12.29□□□□□ -0.44
MKS1-201ENST00000313863 FOXK1P85037 733 aa12.29□□□□□ -0.44
MKS1-201ENST00000313863 C17orf67Q0P5P2 114 aa12.29□□□□□ -0.44
MKS1-201ENST00000313863 ARL6IP1Q15041 203 aa12.29□□□□□ -0.44
MKS1-201ENST00000313863 TSC22D1Q15714 1073 aa12.29□□□□□ -0.44
MKS1-201ENST00000313863 THEM4Q5T1C6 240 aa12.29□□□□□ -0.44
MKS1-201ENST00000313863 FAM109BQ6ICB4 259 aaPredicted RBP12.29□□□□□ -0.44
MKS1-201ENST00000313863 PEG10Q86TG7 708 aaKnown RBP12.29□□□□□ -0.44
MKS1-201ENST00000313863 OR4A4PQ8NGN8 299 aa12.29□□□□□ -0.44
MKS1-201ENST00000313863 RRNAD1Q96FB5 475 aaKnown RBP12.29□□□□□ -0.44
MKS1-201ENST00000313863 C12orf57Q99622 126 aa12.29□□□□□ -0.44
MKS1-201ENST00000313863 MICU1Q9BPX6 476 aa12.29□□□□□ -0.44
MKS1-201ENST00000313863 NRIP2Q9BQI9 281 aa12.29□□□□□ -0.44
MKS1-201ENST00000313863 C5orf66Q9H5L9 145 aa12.29□□□□□ -0.44
MKS1-201ENST00000313863 RHOFQ9HBH0 211 aa12.29□□□□□ -0.44
MKS1-201ENST00000313863 ZNF304Q9HCX3 659 aa12.29□□□□□ -0.44
MKS1-201ENST00000313863 FANCFQ9NPI8 374 aa12.29□□□□□ -0.44
MKS1-201ENST00000313863 ALKBH4Q9NXW9 302 aa12.29□□□□□ -0.44
MKS1-201ENST00000313863 COA4Q9NYJ1 87 aa12.29□□□□□ -0.44
MKS1-201ENST00000313863 CYP8B1Q9UNU6 501 aa12.29□□□□□ -0.44
MKS1-201ENST00000313863 ARID1BQ8NFD5 2236 aaPredicted RBP12.29□□□□□ -0.44
MKS1-201ENST00000313863 EXPH5Q8NEV8 1989 aa12.29□□□□□ -0.44
MKS1-201ENST00000313863 CDC14BO60729 498 aa12.28□□□□□ -0.44
MKS1-201ENST00000313863 APOC1P02654 83 aa12.28□□□□□ -0.44
MKS1-201ENST00000313863 AMY2BP19961 511 aa12.28□□□□□ -0.44
MKS1-201ENST00000313863 ADH6P28332 368 aa12.28□□□□□ -0.44
MKS1-201ENST00000313863 ECI1P42126 302 aa12.28□□□□□ -0.44
MKS1-201ENST00000313863 CSNK1EP49674 416 aaKnown RBP12.28□□□□□ -0.44
MKS1-201ENST00000313863 NPY4RP50391 375 aa12.28□□□□□ -0.44
MKS1-201ENST00000313863 PDZK1IP1Q13113 114 aa12.28□□□□□ -0.44
MKS1-201ENST00000313863 SURF2Q15527 256 aaPredicted RBP12.28□□□□□ -0.44
MKS1-201ENST00000313863 HMGN3Q15651 99 aa12.28□□□□□ -0.44
MKS1-201ENST00000313863 ZNF528Q3MIS6 628 aa12.28□□□□□ -0.44
MKS1-201ENST00000313863 GLYATL2Q8WU03 294 aa12.28□□□□□ -0.44
MKS1-201ENST00000313863 SLC2A4RGQ9NR83 387 aa12.28□□□□□ -0.44
MKS1-201ENST00000313863 RCC2Q9P258 522 aaKnown RBP12.28□□□□□ -0.44
MKS1-201ENST00000313863 KLHL13Q9P2N7 655 aa12.28□□□□□ -0.44
MKS1-201ENST00000313863 POLR1DQ9Y2S0 133 aa12.28□□□□□ -0.44
MKS1-201ENST00000313863 A0A1W2PNV4 684 aa12.28□□□□□ -0.44
MKS1-201ENST00000313863 VSTM2BA6NLU5 285 aa12.28□□□□□ -0.44
MKS1-201ENST00000313863 H0YIZ8 118 aa12.28□□□□□ -0.44
MKS1-201ENST00000313863 WISP1O95388 367 aa12.28□□□□□ -0.44
MKS1-201ENST00000313863 HSD11B2P80365 405 aa12.28□□□□□ -0.44
MKS1-201ENST00000313863 HYAL1Q12794 435 aa12.28□□□□□ -0.44
MKS1-201ENST00000313863 ARFRP1Q13795 201 aa12.28□□□□□ -0.44
MKS1-201ENST00000313863 SLC9A3R2Q15599 337 aa12.28□□□□□ -0.44
MKS1-201ENST00000313863 MST1LQ2TV78 715 aa12.28□□□□□ -0.44
MKS1-201ENST00000313863 RTL6Q6ICC9 239 aa12.28□□□□□ -0.44
MKS1-201ENST00000313863 COMMD2Q86X83 199 aa12.28□□□□□ -0.44
MKS1-201ENST00000313863 DMBX1Q8NFW5 382 aa12.28□□□□□ -0.44
MKS1-201ENST00000313863 LMX1AQ8TE12 382 aa12.28□□□□□ -0.44
MKS1-201ENST00000313863 RHBDD1Q8TEB9 315 aa12.28□□□□□ -0.44
MKS1-201ENST00000313863 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.28□□□□□ -0.44
MKS1-201ENST00000313863 EMG1Q92979 244 aaKnown RBP12.28□□□□□ -0.44
MKS1-201ENST00000313863 TMEM230Q96A57 120 aa12.28□□□□□ -0.44
MKS1-201ENST00000313863 SLC26A1Q9H2B4 701 aa12.28□□□□□ -0.44
MKS1-201ENST00000313863 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.28□□□□□ -0.44
MKS1-201ENST00000313863 GHRLQ9UBU3 117 aa12.28□□□□□ -0.44
MKS1-201ENST00000313863 IL11P20809 199 aa12.27□□□□□ -0.45
MKS1-201ENST00000313863 PAX6P26367 422 aa12.27□□□□□ -0.45
MKS1-201ENST00000313863 NPBWR1P48145 328 aa12.27□□□□□ -0.45
MKS1-201ENST00000313863 BIDP55957 195 aa12.27□□□□□ -0.45
MKS1-201ENST00000313863 HTRA3P83110 453 aa12.27□□□□□ -0.45
MKS1-201ENST00000313863 C7orf61Q8IZ16 206 aa12.27□□□□□ -0.45
MKS1-201ENST00000313863 PNLDC1Q8NA58 520 aaKnown RBP12.27□□□□□ -0.45
MKS1-201ENST00000313863 POC1AQ8NBT0 407 aa12.27□□□□□ -0.45
MKS1-201ENST00000313863 OR51E1Q8TCB6 317 aa12.27□□□□□ -0.45
MKS1-201ENST00000313863 NICN1Q9BSH3 213 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms