RNA–Protein interactions for RNA: ENST00000313708.10

EBF1-201, Transcript of early B cell factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBF1, Length 5,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-201ENST00000313708 HIST1H2BJP06899 126 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 SOD3P08294 240 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 GLRA1P23415 457 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 HIST1H2BOP23527 126 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 HIST1H2BBP33778 126 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 HIST1H2BDP58876 126 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 HIST1H2BCP62807 126 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 HIST2H2BEQ16778 126 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.12□□□□□ -0.63
EBF1-201ENST00000313708 ZNF787Q6DD87 383 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 CDPF1Q6NVV7 123 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 TMPRSS7Q7RTY8 843 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 STT3BQ8TCJ2 826 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 FAM3CQ92520 227 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 HIST1H2BHQ93079 126 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 HIST1H2AAQ96QV6 131 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 HIST1H2BNQ99877 126 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 HIST1H2BMQ99879 126 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 RARRES2Q99969 163 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 MSL2Q9HCI7 577 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 TMEM9BQ9NQ34 198 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 MARCH5Q9NX47 278 aa11.12□□□□□ -0.63
EBF1-201ENST00000313708 FGF19O95750 216 aa11.11□□□□□ -0.63
EBF1-201ENST00000313708 PGA3P0DJD8 388 aa11.11□□□□□ -0.63
EBF1-201ENST00000313708 DPPA3Q6W0C5 159 aa11.11□□□□□ -0.63
EBF1-201ENST00000313708 ANGPTL5Q86XS5 388 aa11.11□□□□□ -0.63
EBF1-201ENST00000313708 OR51B6Q9H340 312 aa11.11□□□□□ -0.63
EBF1-201ENST00000313708 MRPS28Q9Y2Q9 187 aaKnown RBP11.11□□□□□ -0.63
EBF1-201ENST00000313708 PHF1O43189 567 aaPredicted RBP11.11□□□□□ -0.63
EBF1-201ENST00000313708 CHRNB4P30926 498 aa11.11□□□□□ -0.63
EBF1-201ENST00000313708 ERVFC1-1P60608 527 aa11.11□□□□□ -0.63
EBF1-201ENST00000313708 MFSD12Q6NUT3 480 aa11.11□□□□□ -0.63
EBF1-201ENST00000313708 SLC22A24Q8N4F4 322 aa11.11□□□□□ -0.63
EBF1-201ENST00000313708 OR5L1Q8NGL2 311 aa11.11□□□□□ -0.63
EBF1-201ENST00000313708 OR5B2Q96R09 309 aa11.11□□□□□ -0.63
EBF1-201ENST00000313708 WWTR1Q9GZV5 400 aa11.11□□□□□ -0.63
EBF1-201ENST00000313708 SNU13P55769 128 aaKnown RBP11.11□□□□□ -0.63
EBF1-201ENST00000313708 SLC24A5Q71RS6 500 aa11.11□□□□□ -0.63
EBF1-201ENST00000313708 PRSS35Q8N3Z0 413 aa11.11□□□□□ -0.63
EBF1-201ENST00000313708 TMEM208Q9BTX3 173 aa11.11□□□□□ -0.63
EBF1-201ENST00000313708 SLC39A9Q9NUM3 307 aa11.11□□□□□ -0.63
EBF1-201ENST00000313708 COLEC10Q9Y6Z7 277 aa11.11□□□□□ -0.63
EBF1-201ENST00000313708 COL18A1P39060 1754 aa11.11□□□□□ -0.63
EBF1-201ENST00000313708 LDB3O75112 727 aa11.11□□□□□ -0.63
EBF1-201ENST00000313708 BSGP35613 385 aa11.11□□□□□ -0.63
EBF1-201ENST00000313708 CLN3Q13286 438 aa11.11□□□□□ -0.63
EBF1-201ENST00000313708 DUSP5Q16690 384 aa11.11□□□□□ -0.63
EBF1-201ENST00000313708 LY6G6FQ5SQ64 297 aa11.11□□□□□ -0.63
EBF1-201ENST00000313708 VHLLQ6RSH7 139 aa11.11□□□□□ -0.63
EBF1-201ENST00000313708 CYB561D1Q8N8Q1 229 aa11.11□□□□□ -0.63
EBF1-201ENST00000313708 OR5D18Q8NGL1 313 aa11.11□□□□□ -0.63
EBF1-201ENST00000313708 ADAM29Q9UKF5 820 aa11.11□□□□□ -0.63
EBF1-201ENST00000313708 ZMIZ1Q9ULJ6 1067 aa11.11□□□□□ -0.63
EBF1-201ENST00000313708 DOCK5Q9H7D0 1870 aa11.11□□□□□ -0.63
EBF1-201ENST00000313708 NSG1A0A0A6YYJ2 146 aa11.1□□□□□ -0.63
EBF1-201ENST00000313708 CLEC3AO75596 197 aa11.1□□□□□ -0.63
EBF1-201ENST00000313708 TOX4O94842 621 aa11.1□□□□□ -0.63
EBF1-201ENST00000313708 OR5AC1P0C628 307 aa11.1□□□□□ -0.63
EBF1-201ENST00000313708 MMP9P14780 707 aa11.1□□□□□ -0.63
EBF1-201ENST00000313708 ZBTB25P24278 435 aa11.1□□□□□ -0.63
EBF1-201ENST00000313708 ENDOGQ14249 297 aaKnown RBP11.1□□□□□ -0.63
EBF1-201ENST00000313708 FAHD2BQ6P2I3 314 aaPredicted RBP11.1□□□□□ -0.63
EBF1-201ENST00000313708 DLK2Q6UY11 383 aa11.1□□□□□ -0.63
EBF1-201ENST00000313708 HIST3H2BBQ8N257 126 aa11.1□□□□□ -0.63
EBF1-201ENST00000313708 LINC01465Q8N7H1 131 aa11.1□□□□□ -0.63
EBF1-201ENST00000313708 MCHR2Q969V1 340 aa11.1□□□□□ -0.63
EBF1-201ENST00000313708 FAHD2AQ96GK7 314 aa11.1□□□□□ -0.63
EBF1-201ENST00000313708 SLC17A5Q9NRA2 495 aa11.1□□□□□ -0.63
EBF1-201ENST00000313708 AKR1A1P14550 325 aa11.1□□□□□ -0.63
EBF1-201ENST00000313708 DUSP1P28562 367 aa11.1□□□□□ -0.63
EBF1-201ENST00000313708 FHITP49789 147 aa11.1□□□□□ -0.63
EBF1-201ENST00000313708 TMEM64Q6YI46 380 aa11.1□□□□□ -0.63
EBF1-201ENST00000313708 OR2L13Q8N349 312 aa11.1□□□□□ -0.63
EBF1-201ENST00000313708 NKAIN3Q8N8D7 197 aa11.1□□□□□ -0.63
EBF1-201ENST00000313708 CLEC1AQ8NC01 280 aa11.1□□□□□ -0.63
EBF1-201ENST00000313708 Q8WTZ3 238 aa11.1□□□□□ -0.63
EBF1-201ENST00000313708 R3HDMLQ9H3Y0 253 aa11.1□□□□□ -0.63
EBF1-201ENST00000313708 BARX1Q9HBU1 254 aaPredicted RBP11.1□□□□□ -0.63
EBF1-201ENST00000313708 BET1LQ9NYM9 111 aa11.1□□□□□ -0.63
EBF1-201ENST00000313708 RCL1Q9Y2P8 373 aaKnown RBP11.1□□□□□ -0.63
EBF1-201ENST00000313708 MSGN1A6NI15 193 aa11.1□□□□□ -0.63
EBF1-201ENST00000313708 NPIPA2E9PIF3 369 aa11.1□□□□□ -0.63
EBF1-201ENST00000313708 RAD51DO75771 328 aa11.1□□□□□ -0.63
EBF1-201ENST00000313708 PRNPP04156 253 aa11.1□□□□□ -0.63
EBF1-201ENST00000313708 TBPP20226 339 aa11.1□□□□□ -0.63
EBF1-201ENST00000313708 RAB38P57729 211 aa11.1□□□□□ -0.63
EBF1-201ENST00000313708 TMEM225Q6GV28 225 aa11.1□□□□□ -0.63
EBF1-201ENST00000313708 GLIPR1L1Q6UWM5 242 aa11.1□□□□□ -0.63
EBF1-201ENST00000313708 LIMS2Q7Z4I7 341 aa11.1□□□□□ -0.63
EBF1-201ENST00000313708 MARCH3Q86UD3 253 aa11.1□□□□□ -0.63
EBF1-201ENST00000313708 TMEM183AQ8IXX5 376 aa11.1□□□□□ -0.63
EBF1-201ENST00000313708 VN1R17PQ8TDU5 208 aa11.1□□□□□ -0.63
EBF1-201ENST00000313708 RSPRY1Q96DX4 576 aa11.1□□□□□ -0.63
EBF1-201ENST00000313708 ZNF2Q9BSG1 426 aaPredicted RBP11.1□□□□□ -0.63
EBF1-201ENST00000313708 NXT1Q9UKK6 140 aaKnown RBP11.1□□□□□ -0.63
EBF1-201ENST00000313708 STRCQ7RTU9 1775 aa11.1□□□□□ -0.63
EBF1-201ENST00000313708 LDLRAD4O15165 306 aa11.1□□□□□ -0.63
EBF1-201ENST00000313708 ZNF728P0DKX0 622 aa11.1□□□□□ -0.63
EBF1-201ENST00000313708 FCARP24071 287 aa11.1□□□□□ -0.63
EBF1-201ENST00000313708 BLVRBP30043 206 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms