RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 TRAV17A0A0B4J275 112 aa18.59■□□□□ 0.57
ATG4D-201ENST00000309469 DHRS3O75911 302 aa18.59■□□□□ 0.57
ATG4D-201ENST00000309469 MT-ND4P03905 459 aa18.59■□□□□ 0.57
ATG4D-201ENST00000309469 GIFP27352 417 aa18.59■□□□□ 0.57
ATG4D-201ENST00000309469 BTG1P62324 171 aa18.59■□□□□ 0.57
ATG4D-201ENST00000309469 SNAI3Q3KNW1 292 aa18.59■□□□□ 0.57
ATG4D-201ENST00000309469 SFRP5Q5T4F7 317 aa18.59■□□□□ 0.57
ATG4D-201ENST00000309469 OR10K2Q6IF99 312 aa18.59■□□□□ 0.57
ATG4D-201ENST00000309469 CDH26Q8IXH8 852 aa18.59■□□□□ 0.57
ATG4D-201ENST00000309469 CCDC54Q8NEL0 328 aa18.59■□□□□ 0.57
ATG4D-201ENST00000309469 APH1AQ96BI3 265 aa18.59■□□□□ 0.57
ATG4D-201ENST00000309469 SGK3Q96BR1 496 aa18.59■□□□□ 0.57
ATG4D-201ENST00000309469 CACNG6Q9BXT2 260 aa18.59■□□□□ 0.57
ATG4D-201ENST00000309469 PAIP2BQ9ULR5 123 aaKnown RBP18.59■□□□□ 0.57
ATG4D-201ENST00000309469 KCNMB2Q9Y691 235 aa18.59■□□□□ 0.57
ATG4D-201ENST00000309469 ZFHX2Q9C0A1 2572 aaPredicted RBP18.59■□□□□ 0.57
ATG4D-201ENST00000309469 DMXL1Q9Y485 3027 aa18.59■□□□□ 0.57
ATG4D-201ENST00000309469 A8MV72 311 aaPredicted RBP18.59■□□□□ 0.57
ATG4D-201ENST00000309469 ZNF587BE7ETH6 402 aa18.59■□□□□ 0.57
ATG4D-201ENST00000309469 MMP7P09237 267 aaPredicted RBP18.59■□□□□ 0.57
ATG4D-201ENST00000309469 RAB6AP20340 208 aa18.59■□□□□ 0.57
ATG4D-201ENST00000309469 HTR5AP47898 357 aa18.59■□□□□ 0.57
ATG4D-201ENST00000309469 HRASLSQ9HDD0 168 aa18.59■□□□□ 0.57
ATG4D-201ENST00000309469 RAB22AQ9UL26 194 aa18.59■□□□□ 0.57
ATG4D-201ENST00000309469 NCOA6Q14686 2063 aaPredicted RBP18.58■□□□□ 0.57
ATG4D-201ENST00000309469 ANKRD20A5PA0PJZ0 165 aa18.58■□□□□ 0.56
ATG4D-201ENST00000309469 CEACAM4O75871 244 aa18.58■□□□□ 0.56
ATG4D-201ENST00000309469 BPNT1O95861 308 aa18.58■□□□□ 0.56
ATG4D-201ENST00000309469 ZNF24P17028 368 aa18.58■□□□□ 0.56
ATG4D-201ENST00000309469 THBS4P35443 961 aa18.58■□□□□ 0.56
ATG4D-201ENST00000309469 NUFIP2Q7Z417 695 aaKnown RBP18.58■□□□□ 0.56
ATG4D-201ENST00000309469 COPZ2Q9P299 210 aa18.58■□□□□ 0.56
ATG4D-201ENST00000309469 UPB1Q9UBR1 384 aa18.58■□□□□ 0.56
ATG4D-201ENST00000309469 NUBP2Q9Y5Y2 271 aa18.58■□□□□ 0.56
ATG4D-201ENST00000309469 MTRF1O75570 445 aaKnown RBP18.57■□□□□ 0.56
ATG4D-201ENST00000309469 TGM6O95932 706 aa18.57■□□□□ 0.56
ATG4D-201ENST00000309469 TCRBP04435 133 aa18.57■□□□□ 0.56
ATG4D-201ENST00000309469 ALDOBP05062 364 aa18.57■□□□□ 0.56
ATG4D-201ENST00000309469 NKX2-5P52952 324 aaPredicted RBP18.57■□□□□ 0.56
ATG4D-201ENST00000309469 RAB25P57735 213 aa18.57■□□□□ 0.56
ATG4D-201ENST00000309469 HGFACQ04756 655 aa18.57■□□□□ 0.56
ATG4D-201ENST00000309469 KCNJ8Q15842 424 aa18.57■□□□□ 0.56
ATG4D-201ENST00000309469 RSPO4Q2I0M5 234 aaPredicted RBP18.57■□□□□ 0.56
ATG4D-201ENST00000309469 ANGPTL5Q86XS5 388 aa18.57■□□□□ 0.56
ATG4D-201ENST00000309469 GAL3ST1Q99999 423 aa18.57■□□□□ 0.56
ATG4D-201ENST00000309469 A0A0A6YYH2 397 aa18.57■□□□□ 0.56
ATG4D-201ENST00000309469 IGKV1-9A0A0C4DH69 117 aa18.57■□□□□ 0.56
ATG4D-201ENST00000309469 NAP1L6A6NFF2 107 aa18.57■□□□□ 0.56
ATG4D-201ENST00000309469 A6NJ64 397 aa18.57■□□□□ 0.56
ATG4D-201ENST00000309469 H7C417 338 aa18.57■□□□□ 0.56
ATG4D-201ENST00000309469 EFSO43281 561 aa18.57■□□□□ 0.56
ATG4D-201ENST00000309469 RBBP9O75884 186 aa18.57■□□□□ 0.56
ATG4D-201ENST00000309469 IGHG3P01860 377 aa18.57■□□□□ 0.56
ATG4D-201ENST00000309469 HCKP08631 526 aa18.57■□□□□ 0.56
ATG4D-201ENST00000309469 PRSS3P35030 304 aa18.57■□□□□ 0.56
ATG4D-201ENST00000309469 CCR6P51684 374 aa18.57■□□□□ 0.56
ATG4D-201ENST00000309469 QRFPP83859 136 aa18.57■□□□□ 0.56
ATG4D-201ENST00000309469 PMPCAQ10713 525 aa18.57■□□□□ 0.56
ATG4D-201ENST00000309469 C9orf135Q5VTT2 229 aa18.57■□□□□ 0.56
ATG4D-201ENST00000309469 ZNF627Q7L945 461 aa18.57■□□□□ 0.56
ATG4D-201ENST00000309469 RNF144BQ7Z419 303 aa18.57■□□□□ 0.56
ATG4D-201ENST00000309469 ZNF100Q8IYN0 542 aa18.57■□□□□ 0.56
ATG4D-201ENST00000309469 SPACA5Q96QH8 159 aa18.57■□□□□ 0.56
ATG4D-201ENST00000309469 NEK6Q9HC98 313 aa18.57■□□□□ 0.56
ATG4D-201ENST00000309469 NUDT15Q9NV35 164 aa18.57■□□□□ 0.56
ATG4D-201ENST00000309469 MTFP1Q9UDX5 166 aa18.57■□□□□ 0.56
ATG4D-201ENST00000309469 POU2F3Q9UKI9 436 aa18.57■□□□□ 0.56
ATG4D-201ENST00000309469 SLC22A20A6NK97 555 aa18.56■□□□□ 0.56
ATG4D-201ENST00000309469 LCATP04180 440 aa18.56■□□□□ 0.56
ATG4D-201ENST00000309469 PAQR4Q8N4S7 273 aaPredicted RBP18.56■□□□□ 0.56
ATG4D-201ENST00000309469 PP6455Q8WZ26 134 aa18.56■□□□□ 0.56
ATG4D-201ENST00000309469 C10orf35Q96D05 121 aa18.56■□□□□ 0.56
ATG4D-201ENST00000309469 MOV10Q9HCE1 1003 aaKnown RBP18.56■□□□□ 0.56
ATG4D-201ENST00000309469 PIGLQ9Y2B2 252 aa18.56■□□□□ 0.56
ATG4D-201ENST00000309469 TRAV6A0A075B6T7 132 aa18.55■□□□□ 0.56
ATG4D-201ENST00000309469 METTL21EPA6NDL7 271 aa18.55■□□□□ 0.56
ATG4D-201ENST00000309469 GMDSO60547 372 aa18.55■□□□□ 0.56
ATG4D-201ENST00000309469 DHFRP00374 187 aa18.55■□□□□ 0.56
ATG4D-201ENST00000309469 VSIG8P0DPA2 414 aa18.55■□□□□ 0.56
ATG4D-201ENST00000309469 FOXG1P55316 489 aaPredicted RBP18.55■□□□□ 0.56
ATG4D-201ENST00000309469 UNC119Q13432 240 aa18.55■□□□□ 0.56
ATG4D-201ENST00000309469 ZFP69Q49AA0 526 aa18.55■□□□□ 0.56
ATG4D-201ENST00000309469 PABPC1L2AQ5JQF8 200 aa18.55■□□□□ 0.56
ATG4D-201ENST00000309469 AWAT2Q6E213 333 aa18.55■□□□□ 0.56
ATG4D-201ENST00000309469 ZNF224Q9NZL3 707 aa18.55■□□□□ 0.56
ATG4D-201ENST00000309469 ZNF175Q9Y473 711 aa18.55■□□□□ 0.56
ATG4D-201ENST00000309469 A0A096LPE4 126 aa18.55■□□□□ 0.56
ATG4D-201ENST00000309469 A0A1W2PPZ6 126 aa18.55■□□□□ 0.56
ATG4D-201ENST00000309469 PRF1P14222 555 aa18.55■□□□□ 0.56
ATG4D-201ENST00000309469 FAHP16930 419 aa18.55■□□□□ 0.56
ATG4D-201ENST00000309469 GUCA2AQ02747 115 aa18.55■□□□□ 0.56
ATG4D-201ENST00000309469 FAPQ12884 760 aa18.55■□□□□ 0.56
ATG4D-201ENST00000309469 UTS2BQ765I0 119 aa18.55■□□□□ 0.56
ATG4D-201ENST00000309469 SSC4DQ8WTU2 575 aa18.55■□□□□ 0.56
ATG4D-201ENST00000309469 REEP6Q96HR9 211 aa18.55■□□□□ 0.56
ATG4D-201ENST00000309469 DMRTB1Q96MA1 342 aa18.55■□□□□ 0.56
ATG4D-201ENST00000309469 RANGRFQ9HD47 186 aaPredicted RBP18.55■□□□□ 0.56
ATG4D-201ENST00000309469 FBLN5Q9UBX5 448 aa18.55■□□□□ 0.56
ATG4D-201ENST00000309469 MRPS28Q9Y2Q9 187 aaKnown RBP18.55■□□□□ 0.56
ATG4D-201ENST00000309469 ALX3O95076 343 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms