RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 KCNE5Q9UJ90 142 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 SH3BGRL2Q9UJC5 107 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 TINAGQ9UJW2 476 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 FOXJ3Q9UPW0 622 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 RCE1Q9Y256 329 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 ZNF835Q9Y2P0 537 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 MRPS7Q9Y2R9 242 aaKnown RBP4.33□□□□□ -1.72
CKS1B-201ENST00000308987 TMA7Q9Y2S6 64 aaKnown RBP4.33□□□□□ -1.72
CKS1B-201ENST00000308987 MRPS2Q9Y399 296 aaKnown RBP4.33□□□□□ -1.72
CKS1B-201ENST00000308987 ZNF337Q9Y3M9 751 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 TMEM14AQ9Y6G1 99 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 SONP18583 2426 aaKnown RBP4.33□□□□□ -1.72
CKS1B-201ENST00000308987 PRR14LQ5THK1 2151 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 DOCK7Q96N67 2140 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 ANK2Q01484 3957 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 TRAV27A0A087WT01 109 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 TRBV5-7A0A0A0MS05 114 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 IGHV1-45A0A0A0MS14 117 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 TRAV17A0A0B4J275 112 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 OR2W5A6NFC9 320 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 MFSD2BA6NFX1 497 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 A8MXK9 166 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 PIN1P1O15428 100 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 TPD52L2O43399 206 aaKnown RBP4.32□□□□□ -1.72
CKS1B-201ENST00000308987 XRCC3O43542 346 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 FGF17O60258 216 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 LDB3O75112 727 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 KHDRBS3O75525 346 aaKnown RBP4.32□□□□□ -1.72
CKS1B-201ENST00000308987 RBBP9O75884 186 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 GLSO94925 669 aaPredicted RBP4.32□□□□□ -1.72
CKS1B-201ENST00000308987 HIST1H2ABP04908 130 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 CD63P08962 238 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 MRPL3P09001 348 aaKnown RBP4.32□□□□□ -1.72
CKS1B-201ENST00000308987 CD37P11049 281 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 PNMTP11086 282 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 COX6B1P14854 86 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 PPP3CBP16298 524 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 HIST1H1CP16403 213 aaKnown RBP4.32□□□□□ -1.72
CKS1B-201ENST00000308987 FUT1P19526 365 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 S1PR1P21453 382 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 S100A11P31949 105 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 GABRA3P34903 492 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 PTGER1P34995 402 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 VEGFCP49767 419 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 P2RX1P51575 399 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 NR0B1P51843 470 aaKnown RBP4.32□□□□□ -1.72
CKS1B-201ENST00000308987 CAPZA1P52907 286 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 VSX2P58304 361 aaPredicted RBP4.32□□□□□ -1.72
CKS1B-201ENST00000308987 GMFBP60983 142 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 SEC61A1P61619 476 aaKnown RBP4.32□□□□□ -1.72
CKS1B-201ENST00000308987 IGLV3-21P80748 117 aaPredicted RBP4.32□□□□□ -1.72
CKS1B-201ENST00000308987 SRSF4Q08170 494 aaKnown RBP4.32□□□□□ -1.72
CKS1B-201ENST00000308987 CRYZQ08257 329 aaKnown RBP4.32□□□□□ -1.72
CKS1B-201ENST00000308987 ALKBH1Q13686 389 aaKnown RBP4.32□□□□□ -1.72
CKS1B-201ENST00000308987 RBMS2Q15434 407 aaKnown RBP4.32□□□□□ -1.72
CKS1B-201ENST00000308987 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.32□□□□□ -1.72
CKS1B-201ENST00000308987 PRTGQ2VWP7 1150 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 NDUFAF6Q330K2 333 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 DEFB134Q4QY38 66 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 ALG10BQ5I7T1 473 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 TMEM69Q5SWH9 247 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 RGS7BPQ6MZT1 257 aaPredicted RBP4.32□□□□□ -1.72
CKS1B-201ENST00000308987 FAM122CQ6P4D5 195 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 TMEM65Q6PI78 240 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 NDUFAF7Q7L592 441 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 HIST3H2AQ7L7L0 130 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 SSX6Q7RTT6 188 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 SLC36A1Q7Z2H8 476 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 FAM220AQ7Z4H9 259 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 KRT77Q7Z794 578 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 GLB1L2Q8IW92 636 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 DND1Q8IYX4 353 aaKnown RBP4.32□□□□□ -1.72
CKS1B-201ENST00000308987 SLC38A6Q8IZM9 456 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 CA13Q8N1Q1 262 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 CYB561A3Q8NBI2 242 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 OR52E2Q8NGJ4 325 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 GPR148Q8TDV2 347 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 SMAP2Q8WU79 429 aaPredicted RBP4.32□□□□□ -1.72
CKS1B-201ENST00000308987 CCDC107Q8WV48 283 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 NRGNQ92686 78 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 HIST1H2ACQ93077 130 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 RERGQ96A58 199 aaPredicted RBP4.32□□□□□ -1.72
CKS1B-201ENST00000308987 ZMYND19Q96E35 227 aaPredicted RBP4.32□□□□□ -1.72
CKS1B-201ENST00000308987 IMMP1LQ96LU5 166 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 SFXN2Q96NB2 322 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 SIGLEC12Q96PQ1 595 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 GFI1Q99684 422 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 AIFM2Q9BRQ8 373 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 PELOQ9BRX2 385 aaKnown RBP4.32□□□□□ -1.72
CKS1B-201ENST00000308987 CRB3Q9BUF7 120 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 KRTAP1-5Q9BYS1 174 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 REG4Q9BYZ8 158 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 SLCO5A1Q9H2Y9 848 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 TCF7L1Q9HCS4 588 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 EXOSC3Q9NQT5 275 aaKnown RBP4.32□□□□□ -1.72
CKS1B-201ENST00000308987 RDH8Q9NYR8 311 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 MED11Q9P086 117 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 HCN3Q9P1Z3 774 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 UPB1Q9UBR1 384 aa4.32□□□□□ -1.72
CKS1B-201ENST00000308987 OR5V1Q9UGF6 321 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms