RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 B3GALT5Q9Y2C3 310 aa11.69□□□□□ -0.54
TRIM35-201ENST00000305364 APC2O95996 2303 aa11.69□□□□□ -0.54
TRIM35-201ENST00000305364 CHRM2P08172 466 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 POU3F1Q03052 451 aaPredicted RBP11.68□□□□□ -0.54
TRIM35-201ENST00000305364 DGAT2L6Q6ZPD8 337 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 OR52N4Q8NGI2 321 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 OR8U1Q8NH10 309 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 FAM174AQ8TBP5 190 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 TMEM74BQ9NUR3 256 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 YBX2Q9Y2T7 364 aaKnown RBP11.68□□□□□ -0.54
TRIM35-201ENST00000305364 R4GMQ9 66 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 SPTA1P02549 2419 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 TRPM7Q96QT4 1865 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 A0A1B0GTI1 187 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 ZNF705GA8MUZ8 300 aaPredicted RBP11.68□□□□□ -0.54
TRIM35-201ENST00000305364 SFT2D2O95562 160 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 SLC6A8P48029 635 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 SULT1A1P50225 295 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 TAS2R46P59540 309 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 CSRP2Q16527 193 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 FAHD2BQ6P2I3 314 aaPredicted RBP11.68□□□□□ -0.54
TRIM35-201ENST00000305364 CHRDL2Q6WN34 429 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 OR56B1Q8NGI3 324 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 FAHD2AQ96GK7 314 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 PRO1933Q9H354 126 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 BARX1Q9HBU1 254 aaPredicted RBP11.68□□□□□ -0.54
TRIM35-201ENST00000305364 DTX4Q9Y2E6 619 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 COL4A4P53420 1690 aaPredicted RBP11.68□□□□□ -0.54
TRIM35-201ENST00000305364 XRCC2O43543 280 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 TBPP20226 339 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 TLE3Q04726 772 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 ISXQ2M1V0 245 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 SPIN3Q5JUX0 258 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 ACER2Q5QJU3 275 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 C1QL3Q5VWW1 255 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 LHX8Q68G74 356 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 OR2A2Q6IF42 318 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 MEX3BQ6ZN04 569 aaKnown RBP11.68□□□□□ -0.54
TRIM35-201ENST00000305364 TMEM182Q6ZP80 229 aaPredicted RBP11.68□□□□□ -0.54
TRIM35-201ENST00000305364 TMEM151BQ8IW70 566 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 DTWD2Q8NBA8 298 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 SEMA6DQ8NFY4 1073 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 PHOSPHO2Q8TCD6 241 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 MCHR2Q969V1 340 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 NUDT22Q9BRQ3 303 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 CCDC163A0A0D9SF12 145 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 H3BML4 177 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 DIRAS3O95661 229 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 GABRR1P24046 479 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 TOMM34Q15785 309 aaPredicted RBP11.68□□□□□ -0.54
TRIM35-201ENST00000305364 RSPRY1Q96DX4 576 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 IP6K3Q96PC2 410 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 SPSB2Q99619 263 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 NMNAT2Q9BZQ4 307 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 C1orf198Q9H425 327 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 PLEKHJ1Q9NW61 149 aa11.68□□□□□ -0.54
TRIM35-201ENST00000305364 KLF2Q9Y5W3 355 aaPredicted RBP11.68□□□□□ -0.54
TRIM35-201ENST00000305364 EML2O95834 649 aa11.67□□□□□ -0.54
TRIM35-201ENST00000305364 CD63P08962 238 aa11.67□□□□□ -0.54
TRIM35-201ENST00000305364 CTLA4P16410 223 aa11.67□□□□□ -0.54
TRIM35-201ENST00000305364 DRD3P35462 400 aa11.67□□□□□ -0.54
TRIM35-201ENST00000305364 ADPRHP54922 357 aa11.67□□□□□ -0.54
TRIM35-201ENST00000305364 EP300Q09472 2414 aaPredicted RBP11.67□□□□□ -0.54
TRIM35-201ENST00000305364 NDUFS6O75380 124 aaKnown RBP11.67□□□□□ -0.54
TRIM35-201ENST00000305364 NTSR1P30989 418 aa11.67□□□□□ -0.54
TRIM35-201ENST00000305364 TMEM33P57088 247 aa11.67□□□□□ -0.54
TRIM35-201ENST00000305364 C4orf17Q53FE4 359 aa11.67□□□□□ -0.54
TRIM35-201ENST00000305364 FAM78AQ5JUQ0 283 aa11.67□□□□□ -0.54
TRIM35-201ENST00000305364 FBXW12Q6X9E4 464 aa11.67□□□□□ -0.54
TRIM35-201ENST00000305364 ZNF383Q8NA42 475 aa11.67□□□□□ -0.54
TRIM35-201ENST00000305364 AVL9Q8NBF6 648 aa11.67□□□□□ -0.54
TRIM35-201ENST00000305364 UBAC2Q8NBM4 344 aa11.67□□□□□ -0.54
TRIM35-201ENST00000305364 THAP3Q8WTV1 239 aaPredicted RBP11.67□□□□□ -0.54
TRIM35-201ENST00000305364 KLHDC7BQ96G42 594 aa11.67□□□□□ -0.54
TRIM35-201ENST00000305364 NKX2-4Q9H2Z4 354 aa11.67□□□□□ -0.54
TRIM35-201ENST00000305364 CNOT1A5YKK6 2376 aaKnown RBP11.67□□□□□ -0.54
TRIM35-201ENST00000305364 CD1CP29017 333 aa11.67□□□□□ -0.54
TRIM35-201ENST00000305364 CLRN1P58418 232 aa11.67□□□□□ -0.54
TRIM35-201ENST00000305364 ECH1Q13011 328 aa11.67□□□□□ -0.54
TRIM35-201ENST00000305364 ZNF141Q15928 474 aa11.67□□□□□ -0.54
TRIM35-201ENST00000305364 DRAM2Q6UX65 266 aa11.67□□□□□ -0.54
TRIM35-201ENST00000305364 OR51E1Q8TCB6 317 aa11.67□□□□□ -0.54
TRIM35-201ENST00000305364 THAP10Q9P2Z0 257 aaPredicted RBP11.67□□□□□ -0.54
TRIM35-201ENST00000305364 RTTNQ86VV8 2226 aa11.67□□□□□ -0.54
TRIM35-201ENST00000305364 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.66□□□□□ -0.54
TRIM35-201ENST00000305364 A0A1B0GTQ1 180 aa11.66□□□□□ -0.54
TRIM35-201ENST00000305364 SMCO3A2RU48 225 aa11.66□□□□□ -0.54
TRIM35-201ENST00000305364 TNFSF12O43508 249 aa11.66□□□□□ -0.54
TRIM35-201ENST00000305364 CD226Q15762 336 aa11.66□□□□□ -0.54
TRIM35-201ENST00000305364 HAGHQ16775 308 aa11.66□□□□□ -0.54
TRIM35-201ENST00000305364 ARRDC1Q8N5I2 433 aa11.66□□□□□ -0.54
TRIM35-201ENST00000305364 RRNAD1Q96FB5 475 aaKnown RBP11.66□□□□□ -0.54
TRIM35-201ENST00000305364 PGAM5Q96HS1 289 aa11.66□□□□□ -0.54
TRIM35-201ENST00000305364 OCSTAMPQ9BR26 566 aa11.66□□□□□ -0.54
TRIM35-201ENST00000305364 PDE7BQ9NP56 450 aa11.66□□□□□ -0.54
TRIM35-201ENST00000305364 SLC2A4RGQ9NR83 387 aa11.66□□□□□ -0.54
TRIM35-201ENST00000305364 GDE1Q9NZC3 331 aa11.66□□□□□ -0.54
TRIM35-201ENST00000305364 SLC17A4Q9Y2C5 497 aa11.66□□□□□ -0.54
TRIM35-201ENST00000305364 A0A087WZY1 265 aa11.66□□□□□ -0.54
TRIM35-201ENST00000305364 TMED7-TICAM2A0A0A6YYA0 188 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms