RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 IL21Q9HBE4 155 aa11.6□□□□□ -0.55
COL3A1-201ENST00000304636 RPH3ALQ9UNE2 315 aa11.6□□□□□ -0.55
COL3A1-201ENST00000304636 RCL1Q9Y2P8 373 aaKnown RBP11.6□□□□□ -0.55
COL3A1-201ENST00000304636 TIMM10BQ9Y5J6 103 aa11.6□□□□□ -0.55
COL3A1-201ENST00000304636 TLE1Q04724 770 aa11.6□□□□□ -0.55
COL3A1-201ENST00000304636 CDONQ4KMG0 1287 aa11.6□□□□□ -0.55
COL3A1-201ENST00000304636 RABEPKQ7Z6M1 372 aa11.6□□□□□ -0.55
COL3A1-201ENST00000304636 SLC38A6Q8IZM9 456 aa11.6□□□□□ -0.55
COL3A1-201ENST00000304636 AGBL5Q8NDL9 886 aa11.6□□□□□ -0.55
COL3A1-201ENST00000304636 RPUSD4Q96CM3 377 aaKnown RBP11.6□□□□□ -0.55
COL3A1-201ENST00000304636 BSCL2Q96G97 398 aaPredicted RBP11.6□□□□□ -0.55
COL3A1-201ENST00000304636 OXGR1Q96P68 337 aa11.6□□□□□ -0.55
COL3A1-201ENST00000304636 CALHM2Q9HA72 323 aa11.6□□□□□ -0.55
COL3A1-201ENST00000304636 MED29Q9NX70 200 aa11.6□□□□□ -0.55
COL3A1-201ENST00000304636 GDF2Q9UK05 429 aaPredicted RBP11.6□□□□□ -0.55
COL3A1-201ENST00000304636 C9orf170A2RU37 121 aa11.59□□□□□ -0.55
COL3A1-201ENST00000304636 G3V3Y1 287 aa11.59□□□□□ -0.55
COL3A1-201ENST00000304636 MBTPS2O43462 519 aa11.59□□□□□ -0.55
COL3A1-201ENST00000304636 XRCC2O43543 280 aa11.59□□□□□ -0.55
COL3A1-201ENST00000304636 TIMM8AO60220 97 aaPredicted RBP11.59□□□□□ -0.55
COL3A1-201ENST00000304636 MPC2O95563 127 aa11.59□□□□□ -0.55
COL3A1-201ENST00000304636 WNT11O96014 354 aa11.59□□□□□ -0.55
COL3A1-201ENST00000304636 NRASP01111 189 aa11.59□□□□□ -0.55
COL3A1-201ENST00000304636 ST6GAL1P15907 406 aa11.59□□□□□ -0.55
COL3A1-201ENST00000304636 ZNF92Q03936 586 aa11.59□□□□□ -0.55
COL3A1-201ENST00000304636 PPP1R1AQ13522 171 aa11.59□□□□□ -0.55
COL3A1-201ENST00000304636 DMKNQ6E0U4 476 aaPredicted RBP11.59□□□□□ -0.55
COL3A1-201ENST00000304636 MRM1Q6IN84 353 aaKnown RBP11.59□□□□□ -0.55
COL3A1-201ENST00000304636 CXorf58Q96LI9 332 aa11.59□□□□□ -0.55
COL3A1-201ENST00000304636 POM121BA6NF01 834 aa11.59□□□□□ -0.55
COL3A1-201ENST00000304636 HS3ST1O14792 307 aa11.59□□□□□ -0.55
COL3A1-201ENST00000304636 WDR38Q5JTN6 314 aa11.59□□□□□ -0.55
COL3A1-201ENST00000304636 ZNF793Q6ZN11 406 aa11.59□□□□□ -0.55
COL3A1-201ENST00000304636 CNEP1R1Q8N9A8 125 aa11.59□□□□□ -0.55
COL3A1-201ENST00000304636 PPM1DO15297 605 aa11.59□□□□□ -0.55
COL3A1-201ENST00000304636 CEACAM5P06731 702 aa11.59□□□□□ -0.55
COL3A1-201ENST00000304636 GABRA1P14867 456 aa11.59□□□□□ -0.55
COL3A1-201ENST00000304636 ZNF250P15622 560 aa11.59□□□□□ -0.55
COL3A1-201ENST00000304636 CXCL3P19876 107 aa11.59□□□□□ -0.55
COL3A1-201ENST00000304636 FBXO46Q6PJ61 603 aaPredicted RBP11.59□□□□□ -0.55
COL3A1-201ENST00000304636 OR11H7Q8NGC8 314 aa11.59□□□□□ -0.55
COL3A1-201ENST00000304636 OR4D10Q8NGI6 311 aa11.59□□□□□ -0.55
COL3A1-201ENST00000304636 SLX4Q8IY92 1834 aa11.59□□□□□ -0.55
COL3A1-201ENST00000304636 C4orf47A7E2U8 309 aa11.59□□□□□ -0.55
COL3A1-201ENST00000304636 SFT2D2O95562 160 aa11.59□□□□□ -0.55
COL3A1-201ENST00000304636 RAB5AP20339 215 aa11.59□□□□□ -0.55
COL3A1-201ENST00000304636 SHBQ15464 509 aa11.59□□□□□ -0.55
COL3A1-201ENST00000304636 ZNF429Q86V71 674 aa11.59□□□□□ -0.55
COL3A1-201ENST00000304636 OR10P1Q8NGE3 313 aa11.59□□□□□ -0.55
COL3A1-201ENST00000304636 OR8U1Q8NH10 309 aa11.59□□□□□ -0.55
COL3A1-201ENST00000304636 C4orf45Q96LM5 186 aa11.59□□□□□ -0.55
COL3A1-201ENST00000304636 H0Y8X5 98 aa11.58□□□□□ -0.55
COL3A1-201ENST00000304636 PHOX2AO14813 284 aa11.58□□□□□ -0.55
COL3A1-201ENST00000304636 NKX2-2O95096 273 aa11.58□□□□□ -0.55
COL3A1-201ENST00000304636 SLC10A1Q14973 349 aa11.58□□□□□ -0.55
COL3A1-201ENST00000304636 EXT1Q16394 746 aa11.58□□□□□ -0.55
COL3A1-201ENST00000304636 ACOT6Q3I5F7 207 aaPredicted RBP11.58□□□□□ -0.55
COL3A1-201ENST00000304636 ZNF586Q9NXT0 402 aa11.58□□□□□ -0.55
COL3A1-201ENST00000304636 ADAMTS7Q9UKP4 1686 aa11.58□□□□□ -0.56
COL3A1-201ENST00000304636 IGHV3-20A0A0C4DH32 117 aa11.58□□□□□ -0.56
COL3A1-201ENST00000304636 FIGNL2A6NMB9 653 aa11.58□□□□□ -0.56
COL3A1-201ENST00000304636 IGHA1P01876 353 aa11.58□□□□□ -0.56
COL3A1-201ENST00000304636 TBXA2RP21731 343 aa11.58□□□□□ -0.56
COL3A1-201ENST00000304636 S100A7P31151 101 aa11.58□□□□□ -0.56
COL3A1-201ENST00000304636 FAM53BQ14153 422 aa11.58□□□□□ -0.56
COL3A1-201ENST00000304636 SCMH1Q96GD3 660 aa11.58□□□□□ -0.56
COL3A1-201ENST00000304636 MMP25Q9NPA2 562 aa11.58□□□□□ -0.56
COL3A1-201ENST00000304636 LIN7CQ9NUP9 197 aaKnown RBP11.58□□□□□ -0.56
COL3A1-201ENST00000304636 V9GYS6 101 aa11.58□□□□□ -0.56
COL3A1-201ENST00000304636 COX5AP20674 150 aa11.58□□□□□ -0.56
COL3A1-201ENST00000304636 CD96P40200 585 aa11.58□□□□□ -0.56
COL3A1-201ENST00000304636 ZNF121P58317 390 aaPredicted RBP11.58□□□□□ -0.56
COL3A1-201ENST00000304636 FAM209AQ5JX71 171 aa11.58□□□□□ -0.56
COL3A1-201ENST00000304636 LHFPL5Q8TAF8 219 aa11.58□□□□□ -0.56
COL3A1-201ENST00000304636 INTS12Q96CB8 462 aaKnown RBP11.58□□□□□ -0.56
COL3A1-201ENST00000304636 EID2BQ96D98 161 aa11.58□□□□□ -0.56
COL3A1-201ENST00000304636 ZNF426Q9BUY5 554 aa11.58□□□□□ -0.56
COL3A1-201ENST00000304636 OR51B4Q9Y5P0 310 aa11.58□□□□□ -0.56
COL3A1-201ENST00000304636 POMT1Q9Y6A1 747 aa11.58□□□□□ -0.56
COL3A1-201ENST00000304636 ZNF816-ZNF321PA0A0X1KG74 233 aa11.58□□□□□ -0.56
COL3A1-201ENST00000304636 CD46P15529 392 aa11.58□□□□□ -0.56
COL3A1-201ENST00000304636 FGF7P21781 194 aa11.58□□□□□ -0.56
COL3A1-201ENST00000304636 LGALSLQ3ZCW2 172 aaPredicted RBP11.58□□□□□ -0.56
COL3A1-201ENST00000304636 VWA2Q5GFL6 755 aa11.58□□□□□ -0.56
COL3A1-201ENST00000304636 OTPQ5XKR4 325 aa11.58□□□□□ -0.56
COL3A1-201ENST00000304636 SIGLECL1Q8N7X8 197 aa11.58□□□□□ -0.56
COL3A1-201ENST00000304636 ZNF321PQ8N8H1 164 aa11.58□□□□□ -0.56
COL3A1-201ENST00000304636 NTNG2Q96CW9 530 aa11.58□□□□□ -0.56
COL3A1-201ENST00000304636 MRGPRX4Q96LA9 322 aa11.58□□□□□ -0.56
COL3A1-201ENST00000304636 ZNF251Q9BRH9 671 aa11.58□□□□□ -0.56
COL3A1-201ENST00000304636 MRPL22Q9NWU5 206 aaKnown RBP11.58□□□□□ -0.56
COL3A1-201ENST00000304636 GPR160Q9UJ42 338 aa11.58□□□□□ -0.56
COL3A1-201ENST00000304636 G3V3Q6 166 aa11.58□□□□□ -0.56
COL3A1-201ENST00000304636 DUS4LO95620 317 aaKnown RBP11.58□□□□□ -0.56
COL3A1-201ENST00000304636 NPBWR1P48145 328 aa11.58□□□□□ -0.56
COL3A1-201ENST00000304636 CSNK1EP49674 416 aaKnown RBP11.58□□□□□ -0.56
COL3A1-201ENST00000304636 RANP62826 216 aaKnown RBP11.58□□□□□ -0.56
COL3A1-201ENST00000304636 FABP9Q0Z7S8 132 aa11.58□□□□□ -0.56
COL3A1-201ENST00000304636 SMUG1Q53HV7 270 aa11.58□□□□□ -0.56
COL3A1-201ENST00000304636 RTL8AQ9BWD3 113 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms