RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 Q8TCH9 128 aa22.21■■□□□ 1.15
CDKN2A-201ENST00000304494 C5orf63A6NC05 138 aa22.2■■□□□ 1.14
CDKN2A-201ENST00000304494 F5H0A9 414 aaPredicted RBP22.2■■□□□ 1.14
CDKN2A-201ENST00000304494 LYNP07948 512 aa22.2■■□□□ 1.14
CDKN2A-201ENST00000304494 H2BFMP0C1H6 154 aa22.2■■□□□ 1.14
CDKN2A-201ENST00000304494 ANOS1P23352 680 aa22.2■■□□□ 1.14
CDKN2A-201ENST00000304494 ZFP36P26651 326 aaKnown RBP22.2■■□□□ 1.14
CDKN2A-201ENST00000304494 DDOSTP39656 456 aa22.2■■□□□ 1.14
CDKN2A-201ENST00000304494 OPRL1P41146 370 aa22.2■■□□□ 1.14
CDKN2A-201ENST00000304494 RPS7P62081 194 aaKnown RBP22.2■■□□□ 1.14
CDKN2A-201ENST00000304494 ATP6AP1Q15904 470 aa22.2■■□□□ 1.14
CDKN2A-201ENST00000304494 TIGD6Q17RP2 521 aa22.2■■□□□ 1.14
CDKN2A-201ENST00000304494 KRTAP24-1Q3LI83 254 aa22.2■■□□□ 1.14
CDKN2A-201ENST00000304494 ESCO2Q56NI9 601 aa22.2■■□□□ 1.14
CDKN2A-201ENST00000304494 HIST2H2ABQ8IUE6 130 aaPredicted RBP22.2■■□□□ 1.14
CDKN2A-201ENST00000304494 SPERTQ8NA61 448 aa22.2■■□□□ 1.14
CDKN2A-201ENST00000304494 PRRG3Q9BZD7 231 aa22.2■■□□□ 1.14
CDKN2A-201ENST00000304494 C7orf69Q9H7B7 122 aa22.2■■□□□ 1.14
CDKN2A-201ENST00000304494 POLR3KQ9Y2Y1 108 aaPredicted RBP22.2■■□□□ 1.14
CDKN2A-201ENST00000304494 LOC105371242A0A075B767 164 aa22.19■■□□□ 1.14
CDKN2A-201ENST00000304494 CEACAM18A8MTB9 384 aa22.19■■□□□ 1.14
CDKN2A-201ENST00000304494 SELENOFO60613 162 aa22.19■■□□□ 1.14
CDKN2A-201ENST00000304494 CFL1P23528 166 aaKnown RBP22.19■■□□□ 1.14
CDKN2A-201ENST00000304494 DAPP51397 102 aa22.19■■□□□ 1.14
CDKN2A-201ENST00000304494 ESRRGP62508 458 aa22.19■■□□□ 1.14
CDKN2A-201ENST00000304494 MZT1Q08AG7 82 aa22.19■■□□□ 1.14
CDKN2A-201ENST00000304494 SNAPC1Q16533 368 aa22.19■■□□□ 1.14
CDKN2A-201ENST00000304494 C1orf229Q6ZS94 237 aaPredicted RBP22.19■■□□□ 1.14
CDKN2A-201ENST00000304494 C1QL2Q7Z5L3 287 aa22.19■■□□□ 1.14
CDKN2A-201ENST00000304494 PLPP7Q8NBV4 271 aa22.19■■□□□ 1.14
CDKN2A-201ENST00000304494 OR56B2PQ8NGI1 322 aa22.19■■□□□ 1.14
CDKN2A-201ENST00000304494 THEM6Q8WUY1 208 aa22.19■■□□□ 1.14
CDKN2A-201ENST00000304494 AMELYQ99218 206 aa22.19■■□□□ 1.14
CDKN2A-201ENST00000304494 OCEL1Q9H607 264 aa22.19■■□□□ 1.14
CDKN2A-201ENST00000304494 FN3KRPQ9HA64 309 aa22.19■■□□□ 1.14
CDKN2A-201ENST00000304494 TMEM165Q9HC07 324 aa22.19■■□□□ 1.14
CDKN2A-201ENST00000304494 TVP23BQ9NYZ1 205 aa22.19■■□□□ 1.14
CDKN2A-201ENST00000304494 DNAJC27Q9NZQ0 273 aa22.19■■□□□ 1.14
CDKN2A-201ENST00000304494 LRCH1Q9Y2L9 728 aa22.19■■□□□ 1.14
CDKN2A-201ENST00000304494 AP4S1Q9Y587 144 aa22.19■■□□□ 1.14
CDKN2A-201ENST00000304494 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP22.18■■□□□ 1.14
CDKN2A-201ENST00000304494 A8MXK9 166 aa22.18■■□□□ 1.14
CDKN2A-201ENST00000304494 G3V2T6 193 aa22.18■■□□□ 1.14
CDKN2A-201ENST00000304494 AVPP01185 164 aa22.18■■□□□ 1.14
CDKN2A-201ENST00000304494 SLC2A5P22732 501 aa22.18■■□□□ 1.14
CDKN2A-201ENST00000304494 FASP25445 335 aa22.18■■□□□ 1.14
CDKN2A-201ENST00000304494 PMELP40967 661 aa22.18■■□□□ 1.14
CDKN2A-201ENST00000304494 ZNF121P58317 390 aaPredicted RBP22.18■■□□□ 1.14
CDKN2A-201ENST00000304494 NANPQ8TBE9 248 aa22.18■■□□□ 1.14
CDKN2A-201ENST00000304494 REEP6Q96HR9 211 aa22.18■■□□□ 1.14
CDKN2A-201ENST00000304494 OR10A2Q9H208 303 aa22.18■■□□□ 1.14
CDKN2A-201ENST00000304494 KRT84Q9NSB2 600 aa22.18■■□□□ 1.14
CDKN2A-201ENST00000304494 MIOXQ9UGB7 285 aa22.18■■□□□ 1.14
CDKN2A-201ENST00000304494 PPIAL4AQ9Y536 164 aa22.18■■□□□ 1.14
CDKN2A-201ENST00000304494 A0A0A6YYJ9 748 aa22.17■■□□□ 1.14
CDKN2A-201ENST00000304494 ANKRD30BLA7E2S9 258 aa22.17■■□□□ 1.14
CDKN2A-201ENST00000304494 FAM20BO75063 409 aa22.17■■□□□ 1.14
CDKN2A-201ENST00000304494 ZNF205O95201 554 aa22.17■■□□□ 1.14
CDKN2A-201ENST00000304494 PTBP3O95758 552 aaKnown RBP22.17■■□□□ 1.14
CDKN2A-201ENST00000304494 WNT2P09544 360 aa22.17■■□□□ 1.14
CDKN2A-201ENST00000304494 FCGR1AP12314 374 aa22.17■■□□□ 1.14
CDKN2A-201ENST00000304494 RPS2P15880 293 aaKnown RBP22.17■■□□□ 1.14
CDKN2A-201ENST00000304494 SEC61A1P61619 476 aaKnown RBP22.17■■□□□ 1.14
CDKN2A-201ENST00000304494 PTGES3Q15185 160 aaKnown RBP22.17■■□□□ 1.14
CDKN2A-201ENST00000304494 ZNF404Q494X3 552 aa22.17■■□□□ 1.14
CDKN2A-201ENST00000304494 PRAMEF6Q5VXH4 476 aa22.17■■□□□ 1.14
CDKN2A-201ENST00000304494 FAM57BQ71RH2 274 aa22.17■■□□□ 1.14
CDKN2A-201ENST00000304494 SLC16A9Q7RTY1 509 aa22.17■■□□□ 1.14
CDKN2A-201ENST00000304494 PRSS45Q7RTY3 260 aa22.17■■□□□ 1.14
CDKN2A-201ENST00000304494 ZDHHC13Q8IUH4 622 aa22.17■■□□□ 1.14
CDKN2A-201ENST00000304494 BBS1Q8NFJ9 593 aa22.17■■□□□ 1.14
CDKN2A-201ENST00000304494 SGK3Q96BR1 496 aa22.17■■□□□ 1.14
CDKN2A-201ENST00000304494 DUS3LQ96G46 650 aaKnown RBP22.17■■□□□ 1.14
CDKN2A-201ENST00000304494 RGCCQ9H4X1 137 aa22.17■■□□□ 1.14
CDKN2A-201ENST00000304494 UFSP2Q9NUQ7 469 aa22.17■■□□□ 1.14
CDKN2A-201ENST00000304494 OR5V1Q9UGF6 321 aa22.17■■□□□ 1.14
CDKN2A-201ENST00000304494 CIB2O75838 187 aa22.16■■□□□ 1.14
CDKN2A-201ENST00000304494 NAA10P41227 235 aaPredicted RBP22.16■■□□□ 1.14
CDKN2A-201ENST00000304494 FAM3AP98173 230 aa22.16■■□□□ 1.14
CDKN2A-201ENST00000304494 SRSF2Q01130 221 aaKnown RBP22.16■■□□□ 1.14
CDKN2A-201ENST00000304494 APOFQ13790 326 aa22.16■■□□□ 1.14
CDKN2A-201ENST00000304494 MPPED2Q15777 294 aa22.16■■□□□ 1.14
CDKN2A-201ENST00000304494 LCN1P1Q5VSP4 162 aa22.16■■□□□ 1.14
CDKN2A-201ENST00000304494 PGAM5Q96HS1 289 aa22.16■■□□□ 1.14
CDKN2A-201ENST00000304494 TMEM246Q9BRR3 403 aa22.16■■□□□ 1.14
CDKN2A-201ENST00000304494 SSBP3Q9BWW4 388 aaPredicted RBP22.16■■□□□ 1.14
CDKN2A-201ENST00000304494 C14orf119Q9NWQ9 140 aa22.16■■□□□ 1.14
CDKN2A-201ENST00000304494 LAMP5Q9UJQ1 280 aa22.16■■□□□ 1.14
CDKN2A-201ENST00000304494 EPHA1P21709 976 aa22.15■■□□□ 1.14
CDKN2A-201ENST00000304494 NLRC3Q7RTR2 1065 aa22.15■■□□□ 1.14
CDKN2A-201ENST00000304494 ZNF418Q8TF45 676 aaPredicted RBP22.15■■□□□ 1.14
CDKN2A-201ENST00000304494 NEIL1Q96FI4 390 aaPredicted RBP22.15■■□□□ 1.14
CDKN2A-201ENST00000304494 C19orf24Q9BVV8 132 aa22.15■■□□□ 1.14
CDKN2A-201ENST00000304494 NIPAL2Q9H841 368 aa22.15■■□□□ 1.14
CDKN2A-201ENST00000304494 BRD7Q9NPI1 651 aa22.15■■□□□ 1.14
CDKN2A-201ENST00000304494 RNF7Q9UBF6 113 aa22.15■■□□□ 1.14
CDKN2A-201ENST00000304494 OPN4Q9UHM6 478 aa22.15■■□□□ 1.14
CDKN2A-201ENST00000304494 ENOPH1Q9UHY7 261 aa22.15■■□□□ 1.14
CDKN2A-201ENST00000304494 SNCBQ16143 134 aa22.14■■□□□ 1.13
CDKN2A-201ENST00000304494 GFOD2Q3B7J2 385 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms