RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 CTDSPLO15194 276 aa12.7□□□□□ -0.38
SHCBP1-201ENST00000303383 CEACAM4O75871 244 aa12.7□□□□□ -0.38
SHCBP1-201ENST00000303383 TMIGD3P0DMS9 266 aaPredicted RBP12.7□□□□□ -0.38
SHCBP1-201ENST00000303383 KIR2DL3P43628 341 aa12.7□□□□□ -0.38
SHCBP1-201ENST00000303383 NHLH1Q02575 133 aa12.7□□□□□ -0.38
SHCBP1-201ENST00000303383 ANKRD16Q6P6B7 361 aa12.7□□□□□ -0.38
SHCBP1-201ENST00000303383 PNLDC1Q8NA58 520 aaKnown RBP12.7□□□□□ -0.38
SHCBP1-201ENST00000303383 OR5M9Q8NGP3 310 aa12.7□□□□□ -0.38
SHCBP1-201ENST00000303383 TRIM63Q969Q1 353 aa12.7□□□□□ -0.38
SHCBP1-201ENST00000303383 SPACA5Q96QH8 159 aa12.7□□□□□ -0.38
SHCBP1-201ENST00000303383 XRCC3O43542 346 aa12.69□□□□□ -0.38
SHCBP1-201ENST00000303383 CTAG2O75638 210 aa12.69□□□□□ -0.38
SHCBP1-201ENST00000303383 EFNB2P52799 333 aa12.69□□□□□ -0.38
SHCBP1-201ENST00000303383 PLP2Q04941 152 aa12.69□□□□□ -0.38
SHCBP1-201ENST00000303383 GPR176Q14439 515 aa12.69□□□□□ -0.38
SHCBP1-201ENST00000303383 NRN1LQ496H8 165 aa12.69□□□□□ -0.38
SHCBP1-201ENST00000303383 OR52I2Q8NH67 350 aa12.69□□□□□ -0.38
SHCBP1-201ENST00000303383 UBASH3BQ8TF42 649 aa12.69□□□□□ -0.38
SHCBP1-201ENST00000303383 NPRL2Q8WTW4 380 aa12.69□□□□□ -0.38
SHCBP1-201ENST00000303383 SCNM1Q9BWG6 230 aa12.69□□□□□ -0.38
SHCBP1-201ENST00000303383 CNTD2Q9H8S5 307 aa12.69□□□□□ -0.38
SHCBP1-201ENST00000303383 IGHG3P01860 377 aa12.69□□□□□ -0.38
SHCBP1-201ENST00000303383 GSTT2BP0CG30 244 aa12.69□□□□□ -0.38
SHCBP1-201ENST00000303383 OTX1P32242 354 aaPredicted RBP12.69□□□□□ -0.38
SHCBP1-201ENST00000303383 OR14K1Q8NGZ2 314 aa12.69□□□□□ -0.38
SHCBP1-201ENST00000303383 S100A13Q99584 98 aa12.69□□□□□ -0.38
SHCBP1-201ENST00000303383 UQCC2Q9BRT2 126 aa12.69□□□□□ -0.38
SHCBP1-201ENST00000303383 WNT5BQ9H1J7 359 aa12.69□□□□□ -0.38
SHCBP1-201ENST00000303383 METTL17Q9H7H0 456 aaPredicted RBP12.69□□□□□ -0.38
SHCBP1-201ENST00000303383 MRPL15Q9P015 296 aaKnown RBP12.69□□□□□ -0.38
SHCBP1-201ENST00000303383 GGT3PA6NGU5 568 aa12.68□□□□□ -0.38
SHCBP1-201ENST00000303383 ECDO95905 644 aaPredicted RBP12.68□□□□□ -0.38
SHCBP1-201ENST00000303383 HLA-HP01893 362 aa12.68□□□□□ -0.38
SHCBP1-201ENST00000303383 FAHP16930 419 aa12.68□□□□□ -0.38
SHCBP1-201ENST00000303383 CCL1P22362 96 aa12.68□□□□□ -0.38
SHCBP1-201ENST00000303383 AGTR1P30556 359 aa12.68□□□□□ -0.38
SHCBP1-201ENST00000303383 PLA2G7Q13093 441 aa12.68□□□□□ -0.38
SHCBP1-201ENST00000303383 SNTB2Q13425 540 aaKnown RBP12.68□□□□□ -0.38
SHCBP1-201ENST00000303383 SIAH3Q8IW03 269 aa12.68□□□□□ -0.38
SHCBP1-201ENST00000303383 CCDC54Q8NEL0 328 aa12.68□□□□□ -0.38
SHCBP1-201ENST00000303383 OR4D6Q8NGJ1 314 aa12.68□□□□□ -0.38
SHCBP1-201ENST00000303383 OR2AE1Q8NHA4 323 aa12.68□□□□□ -0.38
SHCBP1-201ENST00000303383 REEP6Q96HR9 211 aa12.68□□□□□ -0.38
SHCBP1-201ENST00000303383 NEK6Q9HC98 313 aa12.68□□□□□ -0.38
SHCBP1-201ENST00000303383 RPL36A-HNRNPH2H7BZ11 118 aa12.68□□□□□ -0.38
SHCBP1-201ENST00000303383 GSTZ1O43708 216 aaPredicted RBP12.68□□□□□ -0.38
SHCBP1-201ENST00000303383 SNAI3Q3KNW1 292 aa12.68□□□□□ -0.38
SHCBP1-201ENST00000303383 C1orf100Q5SVJ3 147 aa12.68□□□□□ -0.38
SHCBP1-201ENST00000303383 OR10K2Q6IF99 312 aa12.68□□□□□ -0.38
SHCBP1-201ENST00000303383 AKAP14Q86UN6 197 aa12.68□□□□□ -0.38
SHCBP1-201ENST00000303383 ANGPTL5Q86XS5 388 aa12.68□□□□□ -0.38
SHCBP1-201ENST00000303383 GCNT2Q8N0V5 402 aa12.68□□□□□ -0.38
SHCBP1-201ENST00000303383 CNEP1R1Q8N9A8 125 aa12.68□□□□□ -0.38
SHCBP1-201ENST00000303383 SEMA6DQ8NFY4 1073 aa12.68□□□□□ -0.38
SHCBP1-201ENST00000303383 FGFBP3Q8TAT2 258 aa12.68□□□□□ -0.38
SHCBP1-201ENST00000303383 GMPPAQ96IJ6 420 aaPredicted RBP12.68□□□□□ -0.38
SHCBP1-201ENST00000303383 DOCK7Q96N67 2140 aa12.68□□□□□ -0.38
SHCBP1-201ENST00000303383 DPAGT1Q9H3H5 408 aa12.68□□□□□ -0.38
SHCBP1-201ENST00000303383 PRSS50Q9UI38 385 aa12.68□□□□□ -0.38
SHCBP1-201ENST00000303383 APC2O95996 2303 aa12.68□□□□□ -0.38
SHCBP1-201ENST00000303383 MKRN2OSH3BPM6 223 aa12.68□□□□□ -0.38
SHCBP1-201ENST00000303383 PTHLHP12272 177 aa12.68□□□□□ -0.38
SHCBP1-201ENST00000303383 CRYGSP22914 178 aa12.68□□□□□ -0.38
SHCBP1-201ENST00000303383 CFPP27918 469 aa12.68□□□□□ -0.38
SHCBP1-201ENST00000303383 THBS4P35443 961 aa12.68□□□□□ -0.38
SHCBP1-201ENST00000303383 PTH2RP49190 550 aa12.68□□□□□ -0.38
SHCBP1-201ENST00000303383 FAM46BQ96A09 425 aa12.68□□□□□ -0.38
SHCBP1-201ENST00000303383 TMA7Q9Y2S6 64 aaKnown RBP12.68□□□□□ -0.38
SHCBP1-201ENST00000303383 C5orf63A6NC05 138 aa12.67□□□□□ -0.38
SHCBP1-201ENST00000303383 AQP7O14520 342 aa12.67□□□□□ -0.38
SHCBP1-201ENST00000303383 ORC5O43913 435 aa12.67□□□□□ -0.38
SHCBP1-201ENST00000303383 RBBP9O75884 186 aa12.67□□□□□ -0.38
SHCBP1-201ENST00000303383 STK11Q15831 433 aa12.67□□□□□ -0.38
SHCBP1-201ENST00000303383 RSPO1Q2MKA7 263 aaPredicted RBP12.67□□□□□ -0.38
SHCBP1-201ENST00000303383 FAM166AQ6J272 317 aa12.67□□□□□ -0.38
SHCBP1-201ENST00000303383 PP6455Q8WZ26 134 aa12.67□□□□□ -0.38
SHCBP1-201ENST00000303383 NEURL2Q9BR09 285 aa12.67□□□□□ -0.38
SHCBP1-201ENST00000303383 GP6Q9HCN6 339 aa12.67□□□□□ -0.38
SHCBP1-201ENST00000303383 GLRX2Q9NS18 164 aa12.67□□□□□ -0.38
SHCBP1-201ENST00000303383 E9PLN8 166 aa12.67□□□□□ -0.38
SHCBP1-201ENST00000303383 ZNHIT1O43257 154 aa12.67□□□□□ -0.38
SHCBP1-201ENST00000303383 KDM4BO94953 1096 aa12.67□□□□□ -0.38
SHCBP1-201ENST00000303383 PMPCAQ10713 525 aa12.67□□□□□ -0.38
SHCBP1-201ENST00000303383 DMRTC1Q5HYR2 192 aa12.67□□□□□ -0.38
SHCBP1-201ENST00000303383 FBXW9Q5XUX1 488 aa12.67□□□□□ -0.38
SHCBP1-201ENST00000303383 GLCCI1Q86VQ1 547 aa12.67□□□□□ -0.38
SHCBP1-201ENST00000303383 CHST4Q8NCG5 386 aa12.67□□□□□ -0.38
SHCBP1-201ENST00000303383 NANOS1Q8WY41 292 aaKnown RBP12.67□□□□□ -0.38
SHCBP1-201ENST00000303383 LYZL4Q96KX0 146 aa12.67□□□□□ -0.38
SHCBP1-201ENST00000303383 PRDM14Q9GZV8 571 aa12.67□□□□□ -0.38
SHCBP1-201ENST00000303383 ELL3Q9HB65 397 aaPredicted RBP12.67□□□□□ -0.38
SHCBP1-201ENST00000303383 MCUBQ9NWR8 336 aa12.67□□□□□ -0.38
SHCBP1-201ENST00000303383 RAB22AQ9UL26 194 aa12.67□□□□□ -0.38
SHCBP1-201ENST00000303383 MRPS28Q9Y2Q9 187 aaKnown RBP12.67□□□□□ -0.38
SHCBP1-201ENST00000303383 MEIOCA2RUB1 952 aa12.67□□□□□ -0.38
SHCBP1-201ENST00000303383 SDHBP21912 280 aa12.67□□□□□ -0.38
SHCBP1-201ENST00000303383 PRSS3P35030 304 aa12.67□□□□□ -0.38
SHCBP1-201ENST00000303383 ARR3P36575 388 aa12.67□□□□□ -0.38
SHCBP1-201ENST00000303383 FOXG1P55316 489 aaPredicted RBP12.67□□□□□ -0.38
SHCBP1-201ENST00000303383 PER3P56645 1201 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms