RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 H3BVH4 76 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 SPINK4O60575 86 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 UBE2MP61081 183 aaKnown RBP9.43□□□□□ -0.9
CLIP1-201ENST00000302528 MS4A18Q3C1V0 323 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 RTL10Q7L3V2 364 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 EXD3Q8N9H8 876 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 SPACA5Q96QH8 159 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 TEAD3Q99594 435 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 TOLLIPQ9H0E2 274 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 NUP98P52948 1817 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 SOX15O60248 233 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 SULT1A2P50226 295 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 HOXA4Q00056 320 aaPredicted RBP9.43□□□□□ -0.9
CLIP1-201ENST00000302528 ELAVL1Q15717 326 aaKnown RBP9.43□□□□□ -0.9
CLIP1-201ENST00000302528 FAM78AQ5JUQ0 283 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 SPNS3Q6ZMD2 512 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 ZNF66Q6ZN08 573 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 TRILQ7L0X0 811 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 EIF4E3Q8N5X7 224 aaKnown RBP9.43□□□□□ -0.9
CLIP1-201ENST00000302528 ADGRG7Q96K78 797 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 OR10C1Q96KK4 312 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 HAPLN2Q9GZV7 340 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 RHOFQ9HBH0 211 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 LSM2Q9Y333 95 aaKnown RBP9.43□□□□□ -0.9
CLIP1-201ENST00000302528 PCDHGA9Q9Y5G4 932 aaKnown RBP9.43□□□□□ -0.9
CLIP1-201ENST00000302528 PRSS1P07477 247 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 CD1EP15812 388 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 NQO2P16083 231 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 POU3F3P20264 500 aaPredicted RBP9.43□□□□□ -0.9
CLIP1-201ENST00000302528 CST5P28325 142 aaPredicted RBP9.43□□□□□ -0.9
CLIP1-201ENST00000302528 ADPRHP54922 357 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 SHHQ15465 462 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 INPP5JQ15735 1006 aaPredicted RBP9.43□□□□□ -0.9
CLIP1-201ENST00000302528 FDX2Q6P4F2 183 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 SFTPA2Q8IWL1 248 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 SFTPA1Q8IWL2 248 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 MRPL43Q8N983 215 aaKnown RBP9.43□□□□□ -0.9
CLIP1-201ENST00000302528 SLC16A11Q8NCK7 471 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 NPEPL1Q8NDH3 523 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 NUDCD2Q8WVJ2 157 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 PKD1L3Q7Z443 1732 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 COL14A1Q05707 1796 aaKnown RBP9.43□□□□□ -0.9
CLIP1-201ENST00000302528 ANKRD34CP0C6C1 535 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 ZNF865P0CJ78 1059 aaPredicted RBP9.43□□□□□ -0.9
CLIP1-201ENST00000302528 RPS19P39019 145 aaKnown RBP9.43□□□□□ -0.9
CLIP1-201ENST00000302528 OPRK1P41145 380 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 LSM11P83369 360 aaKnown RBP eCLIP9.43□□□□□ -0.9
CLIP1-201ENST00000302528 DGCR2P98153 550 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 TMEM183BQ1AE95 376 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 C1orf220Q5T0J3 134 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 RGS7BPQ6MZT1 257 aaPredicted RBP9.43□□□□□ -0.9
CLIP1-201ENST00000302528 MYPOPQ86VE0 399 aaPredicted RBP9.43□□□□□ -0.9
CLIP1-201ENST00000302528 ZBTB44Q8NCP5 570 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 TXNIPQ9H3M7 391 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 UFC1Q9Y3C8 167 aa9.43□□□□□ -0.9
CLIP1-201ENST00000302528 H3BP45 60 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 MNX1P50219 401 aaPredicted RBP9.42□□□□□ -0.9
CLIP1-201ENST00000302528 LIM2P55344 173 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 PJVKQ0ZLH3 352 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 NKAIN1Q4KMZ8 207 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 TMEM88Q6PEY1 159 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 OLIG3Q7RTU3 272 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 TMEM37Q8WXS4 190 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 LHX3Q9UBR4 397 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 ICAM5Q9UMF0 924 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 WASHC3Q9Y3C0 194 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 A0A1W2PNR3 127 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 C7orf72A4D263 438 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 MMP11P24347 488 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 HRH1P35367 487 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 BCL6P41182 706 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 SLC25A26Q70HW3 274 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 RBM45Q8IUH3 476 aaKnown RBP9.42□□□□□ -0.9
CLIP1-201ENST00000302528 AKR7LQ8NHP1 331 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 MARCH1Q8TCQ1 289 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.42□□□□□ -0.9
CLIP1-201ENST00000302528 RTN4IP1Q8WWV3 396 aaPredicted RBP9.42□□□□□ -0.9
CLIP1-201ENST00000302528 FBXO17Q96EF6 278 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 ATP5SQ99766 215 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 FAAP24Q9BTP7 215 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 SARGQ9BW04 601 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 MSL2Q9HCI7 577 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 EMCNQ9ULC0 261 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 CHST2Q9Y4C5 530 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 U3KQ87 197 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 CCDC187A0A096LP49 1063 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 LIMS3P0CW19 117 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 LIMS4P0CW20 117 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 LIPAP38571 399 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 DEFB103AP81534 67 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 SHBQ15464 509 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 ABHD17CQ6PCB6 329 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 OR52N5Q8NH56 324 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 ROBO4Q8WZ75 1007 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 SLC25A46Q96AG3 418 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 SYT11Q9BT88 431 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 TAS2R60P59551 318 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 SELENBP1Q13228 472 aa9.42□□□□□ -0.9
CLIP1-201ENST00000302528 PTCRAQ6ISU1 281 aaPredicted RBP9.42□□□□□ -0.9
CLIP1-201ENST00000302528 ADAMTSL4Q6UY14 1074 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms