RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 MYEF2Q9P2K5 600 aaKnown RBP8.13□□□□□ -1.11
RFX3-201ENST00000302303 RNF115Q9Y4L5 304 aa8.13□□□□□ -1.11
RFX3-201ENST00000302303 N6AMT1Q9Y5N5 214 aa8.13□□□□□ -1.11
RFX3-201ENST00000302303 PKDREJQ9NTG1 2253 aa8.13□□□□□ -1.11
RFX3-201ENST00000302303 RAI1Q7Z5J4 1906 aaPredicted RBP8.13□□□□□ -1.11
RFX3-201ENST00000302303 ROS1P08922 2347 aa8.13□□□□□ -1.11
RFX3-201ENST00000302303 TRBV2A0A0J9YWF9 115 aa8.13□□□□□ -1.11
RFX3-201ENST00000302303 PNMA8CA0A1B0GUJ8 204 aa8.13□□□□□ -1.11
RFX3-201ENST00000302303 SLC3A1Q07837 685 aa8.13□□□□□ -1.11
RFX3-201ENST00000302303 GPR50Q13585 617 aa8.13□□□□□ -1.11
RFX3-201ENST00000302303 OR8B8Q15620 311 aa8.13□□□□□ -1.11
RFX3-201ENST00000302303 TIGD6Q17RP2 521 aa8.13□□□□□ -1.11
RFX3-201ENST00000302303 ODF4Q2M2E3 257 aa8.13□□□□□ -1.11
RFX3-201ENST00000302303 ARMCX4Q5H9R4 360 aa8.13□□□□□ -1.11
RFX3-201ENST00000302303 BCL2L15Q5TBC7 163 aa8.13□□□□□ -1.11
RFX3-201ENST00000302303 LIPKQ5VXJ0 399 aa8.13□□□□□ -1.11
RFX3-201ENST00000302303 MBNL2Q5VZF2 373 aaKnown RBP8.13□□□□□ -1.11
RFX3-201ENST00000302303 UNQ9370/PRO34162Q6UXP9 181 aa8.13□□□□□ -1.11
RFX3-201ENST00000302303 ZNF704Q6ZNC4 412 aaPredicted RBP8.13□□□□□ -1.11
RFX3-201ENST00000302303 HAVCR2Q8TDQ0 301 aa8.13□□□□□ -1.11
RFX3-201ENST00000302303 IGFBPL1Q8WX77 278 aa8.13□□□□□ -1.11
RFX3-201ENST00000302303 CMBLQ96DG6 245 aa8.13□□□□□ -1.11
RFX3-201ENST00000302303 TRMT61AQ96FX7 289 aaKnown RBP8.13□□□□□ -1.11
RFX3-201ENST00000302303 REEP6Q96HR9 211 aa8.13□□□□□ -1.11
RFX3-201ENST00000302303 PGAM5Q96HS1 289 aa8.13□□□□□ -1.11
RFX3-201ENST00000302303 RADILQ96JH8 1075 aa8.13□□□□□ -1.11
RFX3-201ENST00000302303 MRPL37Q9BZE1 423 aaKnown RBP8.13□□□□□ -1.11
RFX3-201ENST00000302303 BCL2L14Q9BZR8 327 aa8.13□□□□□ -1.11
RFX3-201ENST00000302303 PPIL3Q9H2H8 161 aaKnown RBP8.13□□□□□ -1.11
RFX3-201ENST00000302303 ZNF442Q9H7R0 627 aa8.13□□□□□ -1.11
RFX3-201ENST00000302303 MOB1AQ9H8S9 216 aa8.13□□□□□ -1.11
RFX3-201ENST00000302303 PLEKHF2Q9H8W4 249 aa8.13□□□□□ -1.11
RFX3-201ENST00000302303 TRIM36Q9NQ86 728 aa8.13□□□□□ -1.11
RFX3-201ENST00000302303 EIF3KQ9UBQ5 218 aaKnown RBP8.13□□□□□ -1.11
RFX3-201ENST00000302303 FZR1Q9UM11 496 aa8.13□□□□□ -1.11
RFX3-201ENST00000302303 V9GYS6 101 aa8.13□□□□□ -1.11
RFX3-201ENST00000302303 PLCE1Q9P212 2302 aa8.12□□□□□ -1.11
RFX3-201ENST00000302303 TACC2O95359 2948 aa8.12□□□□□ -1.11
RFX3-201ENST00000302303 TRBV5-5A0A0J9YX44 114 aa8.12□□□□□ -1.11
RFX3-201ENST00000302303 A0A1B0GWJ7 208 aa8.12□□□□□ -1.11
RFX3-201ENST00000302303 LOC390937A0A1W2PQ73 354 aa8.12□□□□□ -1.11
RFX3-201ENST00000302303 H3BSH0 61 aa8.12□□□□□ -1.11
RFX3-201ENST00000302303 PIN1P1O15428 100 aa8.12□□□□□ -1.11
RFX3-201ENST00000302303 TBX1O43435 398 aa8.12□□□□□ -1.11
RFX3-201ENST00000302303 XRCC2O43543 280 aa8.12□□□□□ -1.11
RFX3-201ENST00000302303 CD8AP01732 235 aa8.12□□□□□ -1.11
RFX3-201ENST00000302303 IGHV3-13P01766 116 aa8.12□□□□□ -1.11
RFX3-201ENST00000302303 DANCRP0C864 163 aa8.12□□□□□ -1.11
RFX3-201ENST00000302303 HSMCR30P0CW71 290 aa8.12□□□□□ -1.11
RFX3-201ENST00000302303 TUBG1P23258 451 aa8.12□□□□□ -1.11
RFX3-201ENST00000302303 GSK3AP49840 483 aa8.12□□□□□ -1.11
RFX3-201ENST00000302303 FABP6P51161 128 aa8.12□□□□□ -1.11
RFX3-201ENST00000302303 TAS2R43P59537 309 aa8.12□□□□□ -1.11
RFX3-201ENST00000302303 RPS25P62851 125 aaKnown RBP8.12□□□□□ -1.11
RFX3-201ENST00000302303 TSTQ16762 297 aaKnown RBP8.12□□□□□ -1.11
RFX3-201ENST00000302303 SWI5Q1ZZU3 235 aa8.12□□□□□ -1.11
RFX3-201ENST00000302303 CD200R1LQ6Q8B3 271 aa8.12□□□□□ -1.11
RFX3-201ENST00000302303 ARL9Q6T311 187 aa8.12□□□□□ -1.11
RFX3-201ENST00000302303 Q6ZR03 302 aa8.12□□□□□ -1.11
RFX3-201ENST00000302303 OR5AK2Q8NH90 309 aa8.12□□□□□ -1.11
RFX3-201ENST00000302303 FCGR1BQ92637 280 aa8.12□□□□□ -1.11
RFX3-201ENST00000302303 AKAP1Q92667 903 aaKnown RBP eCLIP8.12□□□□□ -1.11
RFX3-201ENST00000302303 YIPF6Q96EC8 236 aa8.12□□□□□ -1.11
RFX3-201ENST00000302303 MYCBPQ99417 103 aaPredicted RBP8.12□□□□□ -1.11
RFX3-201ENST00000302303 MRPS26Q9BYN8 205 aaKnown RBP8.12□□□□□ -1.11
RFX3-201ENST00000302303 OR10A2Q9H208 303 aa8.12□□□□□ -1.11
RFX3-201ENST00000302303 TUBG2Q9NRH3 451 aa8.12□□□□□ -1.11
RFX3-201ENST00000302303 CISD1Q9NZ45 108 aaKnown RBP8.12□□□□□ -1.11
RFX3-201ENST00000302303 ATP23Q9Y6H3 246 aa8.12□□□□□ -1.11
RFX3-201ENST00000302303 CSMD2Q7Z408 3487 aa8.11□□□□□ -1.11
RFX3-201ENST00000302303 LOC107986453A0A1B0GWG9 222 aa8.11□□□□□ -1.11
RFX3-201ENST00000302303 TMEM212A6NML5 194 aa8.11□□□□□ -1.11
RFX3-201ENST00000302303 GOSR1O95249 250 aa8.11□□□□□ -1.11
RFX3-201ENST00000302303 ATE1O95260 518 aa8.11□□□□□ -1.11
RFX3-201ENST00000302303 OR4A8P0C604 315 aa8.11□□□□□ -1.11
RFX3-201ENST00000302303 PRF1P14222 555 aa8.11□□□□□ -1.11
RFX3-201ENST00000302303 RAC2P15153 192 aa8.11□□□□□ -1.11
RFX3-201ENST00000302303 KITLGP21583 273 aa8.11□□□□□ -1.11
RFX3-201ENST00000302303 PSMB9P28065 219 aa8.11□□□□□ -1.11
RFX3-201ENST00000302303 CRYBB2P43320 205 aa8.11□□□□□ -1.11
RFX3-201ENST00000302303 MMP15P51511 669 aa8.11□□□□□ -1.11
RFX3-201ENST00000302303 TMEM244Q5VVB8 128 aa8.11□□□□□ -1.11
RFX3-201ENST00000302303 TMEM42Q69YG0 159 aa8.11□□□□□ -1.11
RFX3-201ENST00000302303 OR2T2Q6IF00 324 aa8.11□□□□□ -1.11
RFX3-201ENST00000302303 VHLLQ6RSH7 139 aa8.11□□□□□ -1.11
RFX3-201ENST00000302303 C1orf174Q8IYL3 243 aa8.11□□□□□ -1.11
RFX3-201ENST00000302303 OR13F1Q8NGS4 319 aa8.11□□□□□ -1.11
RFX3-201ENST00000302303 GTF3AQ92664 365 aaKnown RBP8.11□□□□□ -1.11
RFX3-201ENST00000302303 MRPL24Q96A35 216 aaKnown RBP8.11□□□□□ -1.11
RFX3-201ENST00000302303 ORAI1Q96D31 301 aa8.11□□□□□ -1.11
RFX3-201ENST00000302303 ADAT3Q96EY9 351 aaPredicted RBP8.11□□□□□ -1.11
RFX3-201ENST00000302303 C14orf79Q96F83 325 aa8.11□□□□□ -1.11
RFX3-201ENST00000302303 KCNS3Q9BQ31 491 aa8.11□□□□□ -1.11
RFX3-201ENST00000302303 FGF23Q9GZV9 251 aaPredicted RBP8.11□□□□□ -1.11
RFX3-201ENST00000302303 RGCCQ9H4X1 137 aa8.11□□□□□ -1.11
RFX3-201ENST00000302303 SP140LQ9H930 580 aa8.11□□□□□ -1.11
RFX3-201ENST00000302303 NDUFB11Q9NX14 153 aa8.11□□□□□ -1.11
RFX3-201ENST00000302303 PURGQ9UJV8 347 aaKnown RBP8.11□□□□□ -1.11
RFX3-201ENST00000302303 GTF2A1LQ9UNN4 478 aa8.11□□□□□ -1.11
RFX3-201ENST00000302303 ZNF281Q9Y2X9 895 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms