RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 HOXB5P09067 269 aa9.68□□□□□ -0.86
ZNF558-201ENST00000301475 RPS2P15880 293 aaKnown RBP9.68□□□□□ -0.86
ZNF558-201ENST00000301475 GDI1P31150 447 aa9.68□□□□□ -0.86
ZNF558-201ENST00000301475 FHITP49789 147 aa9.68□□□□□ -0.86
ZNF558-201ENST00000301475 P2RY4P51582 365 aa9.68□□□□□ -0.86
ZNF558-201ENST00000301475 EIF5AP63241 154 aaKnown RBP9.68□□□□□ -0.86
ZNF558-201ENST00000301475 KIR2DS3Q14952 304 aa9.68□□□□□ -0.86
ZNF558-201ENST00000301475 PDGFRLQ15198 375 aa9.68□□□□□ -0.86
ZNF558-201ENST00000301475 GUK1Q16774 197 aa9.68□□□□□ -0.86
ZNF558-201ENST00000301475 Q3ZCU0 254 aa9.68□□□□□ -0.86
ZNF558-201ENST00000301475 C2orf27AQ580R0 203 aa9.68□□□□□ -0.86
ZNF558-201ENST00000301475 POMZP3Q6PJE2 187 aa9.68□□□□□ -0.86
ZNF558-201ENST00000301475 C12orf76Q8N812 135 aaPredicted RBP9.68□□□□□ -0.86
ZNF558-201ENST00000301475 NKAIN3Q8N8D7 197 aa9.68□□□□□ -0.86
ZNF558-201ENST00000301475 KDF1Q8NAX2 398 aaPredicted RBP9.68□□□□□ -0.86
ZNF558-201ENST00000301475 OR9A4Q8NGU2 314 aa9.68□□□□□ -0.86
ZNF558-201ENST00000301475 GTF3AQ92664 365 aaKnown RBP9.68□□□□□ -0.86
ZNF558-201ENST00000301475 SLAMF9Q96A28 289 aa9.68□□□□□ -0.86
ZNF558-201ENST00000301475 SLC22A18Q96BI1 424 aa9.68□□□□□ -0.86
ZNF558-201ENST00000301475 YPEL4Q96NS1 127 aa9.68□□□□□ -0.86
ZNF558-201ENST00000301475 PRDM13Q9H4Q3 707 aa9.68□□□□□ -0.86
ZNF558-201ENST00000301475 CPAMD8Q8IZJ3 1885 aa9.68□□□□□ -0.86
ZNF558-201ENST00000301475 PHF3Q92576 2039 aaKnown RBP9.68□□□□□ -0.86
ZNF558-201ENST00000301475 RHPN2P1A8MT19 583 aa9.68□□□□□ -0.86
ZNF558-201ENST00000301475 CEACAM18A8MTB9 384 aa9.68□□□□□ -0.86
ZNF558-201ENST00000301475 UMAD1C9J7I0 102 aa9.68□□□□□ -0.86
ZNF558-201ENST00000301475 P2RY10O00398 339 aa9.68□□□□□ -0.86
ZNF558-201ENST00000301475 TAAR5O14804 337 aa9.68□□□□□ -0.86
ZNF558-201ENST00000301475 OR6A2O95222 327 aa9.68□□□□□ -0.86
ZNF558-201ENST00000301475 TSPAN15O95858 294 aa9.68□□□□□ -0.86
ZNF558-201ENST00000301475 HOXA5P20719 270 aa9.68□□□□□ -0.86
ZNF558-201ENST00000301475 RAB38P57729 211 aa9.68□□□□□ -0.86
ZNF558-201ENST00000301475 RPS23P62266 143 aaKnown RBP9.68□□□□□ -0.86
ZNF558-201ENST00000301475 CLINT1Q14677 625 aa9.68□□□□□ -0.86
ZNF558-201ENST00000301475 KCTD18Q6PI47 426 aaPredicted RBP9.68□□□□□ -0.86
ZNF558-201ENST00000301475 ARRDC1Q8N5I2 433 aa9.68□□□□□ -0.86
ZNF558-201ENST00000301475 ZNF615Q8N8J6 731 aa9.68□□□□□ -0.86
ZNF558-201ENST00000301475 PNLDC1Q8NA58 520 aaKnown RBP9.68□□□□□ -0.86
ZNF558-201ENST00000301475 OR9K2Q8NGE7 335 aa9.68□□□□□ -0.86
ZNF558-201ENST00000301475 OR52N5Q8NH56 324 aa9.68□□□□□ -0.86
ZNF558-201ENST00000301475 SGK3Q96BR1 496 aa9.68□□□□□ -0.86
ZNF558-201ENST00000301475 ASB16Q96NS5 453 aa9.68□□□□□ -0.86
ZNF558-201ENST00000301475 CHST5Q9GZS9 411 aa9.68□□□□□ -0.86
ZNF558-201ENST00000301475 LMAN1LQ9HAT1 526 aa9.68□□□□□ -0.86
ZNF558-201ENST00000301475 HDGFL3Q9Y3E1 203 aa9.68□□□□□ -0.86
ZNF558-201ENST00000301475 R4GMQ9 66 aa9.68□□□□□ -0.86
ZNF558-201ENST00000301475 SPEGQ15772 3267 aa9.68□□□□□ -0.86
ZNF558-201ENST00000301475 PRSS38A1L453 326 aa9.67□□□□□ -0.86
ZNF558-201ENST00000301475 SFTPBP07988 381 aa9.67□□□□□ -0.86
ZNF558-201ENST00000301475 CLDN6P56747 220 aa9.67□□□□□ -0.86
ZNF558-201ENST00000301475 CCINQ13939 588 aa9.67□□□□□ -0.86
ZNF558-201ENST00000301475 KIAA0141Q14154 515 aaPredicted RBP9.67□□□□□ -0.86
ZNF558-201ENST00000301475 ACKR1Q16570 336 aa9.67□□□□□ -0.86
ZNF558-201ENST00000301475 C9orf50Q5SZB4 431 aa9.67□□□□□ -0.86
ZNF558-201ENST00000301475 ZNF574Q6ZN55 896 aaPredicted RBP9.67□□□□□ -0.86
ZNF558-201ENST00000301475 MRPL43Q8N983 215 aaKnown RBP9.67□□□□□ -0.86
ZNF558-201ENST00000301475 ZNF565Q8N9K5 539 aa9.67□□□□□ -0.86
ZNF558-201ENST00000301475 METTL21AQ8WXB1 218 aa9.67□□□□□ -0.86
ZNF558-201ENST00000301475 OR2M4Q96R27 311 aa9.67□□□□□ -0.86
ZNF558-201ENST00000301475 CCNL2Q96S94 520 aaPredicted RBP9.67□□□□□ -0.86
ZNF558-201ENST00000301475 APOOQ9BUR5 198 aa9.67□□□□□ -0.86
ZNF558-201ENST00000301475 LINC01553A4QN01 128 aa9.67□□□□□ -0.86
ZNF558-201ENST00000301475 PET100P0DJ07 73 aa9.67□□□□□ -0.86
ZNF558-201ENST00000301475 RPL12P30050 165 aaKnown RBP9.67□□□□□ -0.86
ZNF558-201ENST00000301475 GPR3P46089 330 aa9.67□□□□□ -0.86
ZNF558-201ENST00000301475 ZNF616Q08AN1 781 aa9.67□□□□□ -0.86
ZNF558-201ENST00000301475 DEFB110Q30KQ9 67 aa9.67□□□□□ -0.86
ZNF558-201ENST00000301475 PLAC9Q5JTB6 97 aa9.67□□□□□ -0.86
ZNF558-201ENST00000301475 CLEC9AQ6UXN8 241 aa9.67□□□□□ -0.86
ZNF558-201ENST00000301475 UNQ6494/PRO21346Q6UXR6 183 aa9.67□□□□□ -0.86
ZNF558-201ENST00000301475 HEPN1Q6WQI6 88 aa9.67□□□□□ -0.86
ZNF558-201ENST00000301475 TTLL10Q6ZVT0 673 aa9.67□□□□□ -0.86
ZNF558-201ENST00000301475 COX15Q7KZN9 410 aa9.67□□□□□ -0.86
ZNF558-201ENST00000301475 RD3Q7Z3Z2 195 aa9.67□□□□□ -0.86
ZNF558-201ENST00000301475 PEG10Q86TG7 708 aaKnown RBP9.67□□□□□ -0.86
ZNF558-201ENST00000301475 C1QL4Q86Z23 238 aa9.67□□□□□ -0.86
ZNF558-201ENST00000301475 OR56B1Q8NGI3 324 aa9.67□□□□□ -0.86
ZNF558-201ENST00000301475 OR1J1Q8NGS3 322 aa9.67□□□□□ -0.86
ZNF558-201ENST00000301475 OR13C9Q8NGT0 318 aa9.67□□□□□ -0.86
ZNF558-201ENST00000301475 ZNF519Q8TB69 540 aa9.67□□□□□ -0.86
ZNF558-201ENST00000301475 FGGYQ96C11 551 aa9.67□□□□□ -0.86
ZNF558-201ENST00000301475 OR52A1Q9UKL2 312 aa9.67□□□□□ -0.86
ZNF558-201ENST00000301475 LTBP2Q14767 1821 aa9.67□□□□□ -0.86
ZNF558-201ENST00000301475 A0A1W2PQU0 124 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 RAD51DO75771 328 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 C1QL1O75973 258 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 FPR2P25090 351 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 FCGR2CP31995 323 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 CDX1P47902 265 aaPredicted RBP9.66□□□□□ -0.86
ZNF558-201ENST00000301475 TMEM33P57088 247 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 RHEBQ15382 184 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 VAX1Q5SQQ9 334 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 MAMDC2Q7Z304 686 aaPredicted RBP9.66□□□□□ -0.86
ZNF558-201ENST00000301475 ZNF440Q8IYI8 595 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 TMEM104Q8NE00 496 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 SEMA6DQ8NFY4 1073 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 OR10H5Q8NGA6 315 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 OR13G1Q8NGZ3 307 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 SPPL3Q8TCT6 385 aa9.66□□□□□ -0.86
ZNF558-201ENST00000301475 ERGIC1Q969X5 290 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms