RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 LYZL4Q96KX0 146 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 C4orf45Q96LM5 186 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 CNBD2Q96M20 576 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 Q96MT0 163 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 DOK1Q99704 481 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 KCNJ15Q99712 375 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 COPS4Q9BT78 406 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 MRPL37Q9BZE1 423 aaKnown RBP5.05□□□□□ -1.6
SSX3-201ENST00000298396 ISG20L2Q9H9L3 353 aaKnown RBP5.05□□□□□ -1.6
SSX3-201ENST00000298396 UBTD1Q9HAC8 227 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 ELOVL3Q9HB03 270 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 CDH20Q9HBT6 801 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 MOV10Q9HCE1 1003 aaKnown RBP5.05□□□□□ -1.6
SSX3-201ENST00000298396 NGBQ9NPG2 151 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 G6PC2Q9NQR9 355 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 CA10Q9NS85 328 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 CENPMQ9NSP4 180 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 FAM206AQ9NX38 181 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 FBLN5Q9UBX5 448 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 GPR160Q9UJ42 338 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 FBXL7Q9UJT9 491 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 FZR1Q9UM11 496 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 DIMT1Q9UNQ2 313 aaKnown RBP5.05□□□□□ -1.6
SSX3-201ENST00000298396 GRIP1Q9Y3R0 1128 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 RPL36Q9Y3U8 105 aaKnown RBP5.05□□□□□ -1.6
SSX3-201ENST00000298396 ATP23Q9Y6H3 246 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 CELSR1Q9NYQ6 3014 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 MALRD1Q5VYJ5 2156 aa5.05□□□□□ -1.6
SSX3-201ENST00000298396 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.05□□□□□ -1.63e-6■■□□□ 13.5
SSX3-201ENST00000298396 IGLV3-9A0A075B6K5 115 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 E9PI62 339 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 ZNF670-ZNF695F2Z2N8 137 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 PTHP01270 115 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 IGLV3-1P01715 115 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 MT-ND2P03891 347 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 H2BFMP0C1H6 154 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 CRHBPP24387 322 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 GLRXP35754 106 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 PSMB10P40306 273 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 NANOS3P60323 173 aaKnown RBP5.04□□□□□ -1.6
SSX3-201ENST00000298396 PPP1CBP62140 327 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 GRB2P62993 217 aaKnown RBP5.04□□□□□ -1.6
SSX3-201ENST00000298396 ZNF92Q03936 586 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 ST3GAL4Q11206 333 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 HNRNPA0Q13151 305 aaKnown RBP5.04□□□□□ -1.6
SSX3-201ENST00000298396 GALEQ14376 348 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 GLYATL3Q5SZD4 288 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 MBNL2Q5VZF2 373 aaKnown RBP5.04□□□□□ -1.6
SSX3-201ENST00000298396 XAF1Q6GPH4 301 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 PAMR1Q6UXH9 720 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 Q6ZR03 302 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 AHSA2Q719I0 299 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 RHOUQ7L0Q8 258 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 CATSPERDQ86XM0 798 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 PRSS35Q8N3Z0 413 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 ACBD7Q8N6N7 88 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 ZNF283Q8N7M2 679 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 ZNF611Q8N823 705 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 OR8B12Q8NGG6 310 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 OR1J2Q8NGS2 313 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 OR1J1Q8NGS3 322 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 SLC25A40Q8TBP6 338 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 RPS4Y2Q8TD47 263 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 IPCEF1Q8WWN9 437 aaPredicted RBP5.04□□□□□ -1.6
SSX3-201ENST00000298396 ASB17Q8WXJ9 295 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 FAM168AQ92567 244 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 RORBQ92753 470 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 FBXW5Q969U6 566 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 PELI1Q96FA3 418 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 LURAP1Q96LR2 239 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 DCLRE1CQ96SD1 692 aaKnown RBP5.04□□□□□ -1.6
SSX3-201ENST00000298396 MNTQ99583 582 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 DHRS9Q9BPW9 319 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 SYT3Q9BQG1 590 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 TRAF4Q9BUZ4 470 aaPredicted RBP5.04□□□□□ -1.6
SSX3-201ENST00000298396 ALG8Q9BVK2 526 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 OR2J1Q9GZK6 312 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 DUSP21Q9H596 190 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 ZNF442Q9H7R0 627 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 ACOXLQ9NUZ1 547 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 TBCCD1Q9NVR7 557 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 CISD1Q9NZ45 108 aaKnown RBP5.04□□□□□ -1.6
SSX3-201ENST00000298396 PTTG3PQ9NZH4 202 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 CNOT2Q9NZN8 540 aaKnown RBP5.04□□□□□ -1.6
SSX3-201ENST00000298396 ERVK-18Q9QC07 812 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 SLC22A13Q9Y226 551 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 TMA7Q9Y2S6 64 aaKnown RBP5.04□□□□□ -1.6
SSX3-201ENST00000298396 LSM2Q9Y333 95 aaKnown RBP5.04□□□□□ -1.6
SSX3-201ENST00000298396 LRRC42Q9Y546 428 aa5.04□□□□□ -1.6
SSX3-201ENST00000298396 SIRT4Q9Y6E7 314 aaPredicted RBP5.04□□□□□ -1.6
SSX3-201ENST00000298396 ANK3Q12955 4377 aaKnown RBP5.03□□□□□ -1.6
SSX3-201ENST00000298396 ABCA1O95477 2261 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 A0A1B0GTI1 187 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 hCG_38984A0A1B0GV85 526 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 DAPL1A0PJW8 107 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 EFCAB10A6NFE3 127 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 TRIM64A6NGJ6 449 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 METTL15A6NJ78 407 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 OVOL3O00110 214 aa5.03□□□□□ -1.6
SSX3-201ENST00000298396 PHYHO14832 338 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms