RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 ZNF554Q86TJ5 538 aa13.08□□□□□ -0.31
CCDC140-201ENST00000295226 RDH10Q8IZV5 341 aa13.08□□□□□ -0.31
CCDC140-201ENST00000295226 RADILQ96JH8 1075 aa13.08□□□□□ -0.31
CCDC140-201ENST00000295226 SLC30A2Q9BRI3 323 aa13.08□□□□□ -0.31
CCDC140-201ENST00000295226 POFUT1Q9H488 388 aa13.08□□□□□ -0.31
CCDC140-201ENST00000295226 SMURF1Q9HCE7 757 aa13.08□□□□□ -0.31
CCDC140-201ENST00000295226 FRRS1LQ9P0K9 344 aa13.08□□□□□ -0.31
CCDC140-201ENST00000295226 STARD10Q9Y365 291 aa13.08□□□□□ -0.31
CCDC140-201ENST00000295226 KLF2Q9Y5W3 355 aaPredicted RBP13.08□□□□□ -0.31
CCDC140-201ENST00000295226 ABCA4P78363 2273 aa13.08□□□□□ -0.31
CCDC140-201ENST00000295226 DOPEY2Q9Y3R5 2298 aa13.08□□□□□ -0.32
CCDC140-201ENST00000295226 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.08□□□□□ -0.32
CCDC140-201ENST00000295226 ATP6V1G2-DDX39BF2Z307 99 aa13.08□□□□□ -0.32
CCDC140-201ENST00000295226 ABCD4O14678 606 aa13.08□□□□□ -0.32
CCDC140-201ENST00000295226 TBX1O43435 398 aa13.08□□□□□ -0.32
CCDC140-201ENST00000295226 PLAUP00749 431 aa13.08□□□□□ -0.32
CCDC140-201ENST00000295226 EPXP11678 715 aa13.08□□□□□ -0.32
CCDC140-201ENST00000295226 CFL1P23528 166 aaKnown RBP13.08□□□□□ -0.32
CCDC140-201ENST00000295226 KIR3DL2P43630 455 aa13.08□□□□□ -0.32
CCDC140-201ENST00000295226 DEFA1P59665 94 aa13.08□□□□□ -0.32
CCDC140-201ENST00000295226 DEFA3P59666 94 aa13.08□□□□□ -0.32
CCDC140-201ENST00000295226 PSMA6P60900 246 aaKnown RBP13.08□□□□□ -0.32
CCDC140-201ENST00000295226 ERVS71-1P61550 626 aa13.08□□□□□ -0.32
CCDC140-201ENST00000295226 WDR38Q5JTN6 314 aa13.08□□□□□ -0.32
CCDC140-201ENST00000295226 SPATA46Q5T0L3 261 aa13.08□□□□□ -0.32
CCDC140-201ENST00000295226 DRAM2Q6UX65 266 aa13.08□□□□□ -0.32
CCDC140-201ENST00000295226 TMEM108Q6UXF1 575 aa13.08□□□□□ -0.32
CCDC140-201ENST00000295226 RFPL4BQ6ZWI9 263 aa13.08□□□□□ -0.32
CCDC140-201ENST00000295226 PARP16Q8N5Y8 322 aa13.08□□□□□ -0.32
CCDC140-201ENST00000295226 DRAXINQ8NBI3 349 aaPredicted RBP13.08□□□□□ -0.32
CCDC140-201ENST00000295226 IL17RDQ8NFM7 739 aa13.08□□□□□ -0.32
CCDC140-201ENST00000295226 OR8B12Q8NGG6 310 aa13.08□□□□□ -0.32
CCDC140-201ENST00000295226 OR1J2Q8NGS2 313 aa13.08□□□□□ -0.32
CCDC140-201ENST00000295226 OR2G2Q8NGZ5 317 aa13.08□□□□□ -0.32
CCDC140-201ENST00000295226 HS3ST6Q96QI5 342 aa13.08□□□□□ -0.32
CCDC140-201ENST00000295226 PBOV1Q9GZY1 135 aa13.08□□□□□ -0.32
CCDC140-201ENST00000295226 TRIM36Q9NQ86 728 aa13.08□□□□□ -0.32
CCDC140-201ENST00000295226 G6PC2Q9NQR9 355 aa13.08□□□□□ -0.32
CCDC140-201ENST00000295226 ATPIF1Q9UII2 106 aa13.08□□□□□ -0.32
CCDC140-201ENST00000295226 ST6GALNAC2Q9UJ37 374 aa13.08□□□□□ -0.32
CCDC140-201ENST00000295226 OR52A1Q9UKL2 312 aa13.08□□□□□ -0.32
CCDC140-201ENST00000295226 DEFB108AA8MXU0 73 aa13.07□□□□□ -0.32
CCDC140-201ENST00000295226 CDRT1O95170 752 aa13.07□□□□□ -0.32
CCDC140-201ENST00000295226 CRYAAP02489 173 aa13.07□□□□□ -0.32
CCDC140-201ENST00000295226 COL8A1P27658 744 aa13.07□□□□□ -0.32
CCDC140-201ENST00000295226 SLC3A1Q07837 685 aa13.07□□□□□ -0.32
CCDC140-201ENST00000295226 GFOD2Q3B7J2 385 aa13.07□□□□□ -0.32
CCDC140-201ENST00000295226 C3orf36Q3SXR2 165 aa13.07□□□□□ -0.32
CCDC140-201ENST00000295226 NCMAPQ5T1S8 102 aa13.07□□□□□ -0.32
CCDC140-201ENST00000295226 ADAM5Q6NVV9 412 aa13.07□□□□□ -0.32
CCDC140-201ENST00000295226 ARL9Q6T311 187 aa13.07□□□□□ -0.32
CCDC140-201ENST00000295226 CATSPERDQ86XM0 798 aa13.07□□□□□ -0.32
CCDC140-201ENST00000295226 OR2AE1Q8NHA4 323 aa13.07□□□□□ -0.32
CCDC140-201ENST00000295226 ABHD4Q8TB40 342 aa13.07□□□□□ -0.32
CCDC140-201ENST00000295226 PIK3IP1Q96FE7 263 aa13.07□□□□□ -0.32
CCDC140-201ENST00000295226 PGAM5Q96HS1 289 aa13.07□□□□□ -0.32
CCDC140-201ENST00000295226 PDCD1LG2Q9BQ51 273 aa13.07□□□□□ -0.32
CCDC140-201ENST00000295226 SOX7Q9BT81 388 aa13.07□□□□□ -0.32
CCDC140-201ENST00000295226 NIPAL2Q9H841 368 aa13.07□□□□□ -0.32
CCDC140-201ENST00000295226 NGBQ9NPG2 151 aa13.07□□□□□ -0.32
CCDC140-201ENST00000295226 SNTG1Q9NSN8 517 aa13.07□□□□□ -0.32
CCDC140-201ENST00000295226 USP9YO00507 2555 aaPredicted RBP13.07□□□□□ -0.32
CCDC140-201ENST00000295226 TRBV2A0A0J9YWF9 115 aa13.06□□□□□ -0.32
CCDC140-201ENST00000295226 MAGEB3O15480 346 aa13.06□□□□□ -0.32
CCDC140-201ENST00000295226 PTTG1O95997 202 aa13.06□□□□□ -0.32
CCDC140-201ENST00000295226 CELP19835 753 aa13.06□□□□□ -0.32
CCDC140-201ENST00000295226 PTAFRP25105 342 aa13.06□□□□□ -0.32
CCDC140-201ENST00000295226 DCTDP32321 178 aa13.06□□□□□ -0.32
CCDC140-201ENST00000295226 MMP16P51512 607 aa13.06□□□□□ -0.32
CCDC140-201ENST00000295226 BCAP31P51572 246 aa13.06□□□□□ -0.32
CCDC140-201ENST00000295226 UCP2P55851 309 aa13.06□□□□□ -0.32
CCDC140-201ENST00000295226 ALKBH1Q13686 389 aaKnown RBP13.06□□□□□ -0.32
CCDC140-201ENST00000295226 C22orf42Q6IC83 251 aa13.06□□□□□ -0.32
CCDC140-201ENST00000295226 NEUROG1Q92886 237 aa13.06□□□□□ -0.32
CCDC140-201ENST00000295226 KCNS3Q9BQ31 491 aa13.06□□□□□ -0.32
CCDC140-201ENST00000295226 C1QTNF5Q9BXJ0 243 aa13.06□□□□□ -0.32
CCDC140-201ENST00000295226 MOV10Q9HCE1 1003 aaKnown RBP13.06□□□□□ -0.32
CCDC140-201ENST00000295226 EIF3KQ9UBQ5 218 aaKnown RBP13.06□□□□□ -0.32
CCDC140-201ENST00000295226 FZR1Q9UM11 496 aa13.06□□□□□ -0.32
CCDC140-201ENST00000295226 FUOMA2VDF0 154 aa13.05□□□□□ -0.32
CCDC140-201ENST00000295226 P2RY10O00398 339 aa13.05□□□□□ -0.32
CCDC140-201ENST00000295226 GPRIN2O60269 458 aa13.05□□□□□ -0.32
CCDC140-201ENST00000295226 SMPD2O60906 423 aa13.05□□□□□ -0.32
CCDC140-201ENST00000295226 TTRP02766 147 aa13.05□□□□□ -0.32
CCDC140-201ENST00000295226 RPS25P62851 125 aaKnown RBP13.05□□□□□ -0.32
CCDC140-201ENST00000295226 IFITM3Q01628 133 aa13.05□□□□□ -0.32
CCDC140-201ENST00000295226 HLXQ14774 488 aaPredicted RBP13.05□□□□□ -0.32
CCDC140-201ENST00000295226 GLYATL3Q5SZD4 288 aa13.05□□□□□ -0.32
CCDC140-201ENST00000295226 C1QTNF12Q5T7M4 302 aa13.05□□□□□ -0.32
CCDC140-201ENST00000295226 BCL2L15Q5TBC7 163 aa13.05□□□□□ -0.32
CCDC140-201ENST00000295226 SP5Q6BEB4 398 aaPredicted RBP13.05□□□□□ -0.32
CCDC140-201ENST00000295226 VHLLQ6RSH7 139 aa13.05□□□□□ -0.32
CCDC140-201ENST00000295226 SLC22A25Q6T423 547 aa13.05□□□□□ -0.32
CCDC140-201ENST00000295226 COLCA1Q6ZS62 124 aa13.05□□□□□ -0.32
CCDC140-201ENST00000295226 LYSMD2Q8IV50 215 aa13.05□□□□□ -0.32
CCDC140-201ENST00000295226 SGK3Q96BR1 496 aa13.05□□□□□ -0.32
CCDC140-201ENST00000295226 TRMT61AQ96FX7 289 aaKnown RBP13.05□□□□□ -0.32
CCDC140-201ENST00000295226 ESRP2Q9H6T0 727 aaKnown RBP13.05□□□□□ -0.32
CCDC140-201ENST00000295226 PTTG3PQ9NZH4 202 aa13.05□□□□□ -0.32
CCDC140-201ENST00000295226 DCHS2Q6V1P9 2916 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms