RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 MFSD8Q8NHS3 518 aa2.32□□□□□ -2.04
CHD1-201ENST00000284049 CASTOR1Q8WTX7 329 aa2.32□□□□□ -2.04
CHD1-201ENST00000284049 OR8D1Q8WZ84 308 aa2.32□□□□□ -2.04
CHD1-201ENST00000284049 WWC2-AS2Q96NR7 200 aa2.32□□□□□ -2.04
CHD1-201ENST00000284049 CMSS1Q9BQ75 279 aaKnown RBP2.32□□□□□ -2.04
CHD1-201ENST00000284049 CHIAQ9BZP6 476 aa2.32□□□□□ -2.04
CHD1-201ENST00000284049 COA1Q9GZY4 146 aa2.32□□□□□ -2.04
CHD1-201ENST00000284049 B3GNT2Q9NY97 397 aa2.32□□□□□ -2.04
CHD1-201ENST00000284049 LGALS13Q9UHV8 139 aa2.32□□□□□ -2.04
CHD1-201ENST00000284049 PLXNB2O15031 1838 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 A0A1W2PR80 420 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 ZNF726A6NNF4 738 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 G3V3Y1 287 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 TOX3O15405 576 aaPredicted RBP2.31□□□□□ -2.04
CHD1-201ENST00000284049 ICOSLGO75144 302 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 OR4E1P0C645 316 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 GFAPP14136 432 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 ALDH3A1P30838 453 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 MAS1LP35410 378 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 CD79BP40259 229 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 P2RY2P41231 377 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 RPL19P84098 196 aaKnown RBP2.31□□□□□ -2.04
CHD1-201ENST00000284049 SIGLEC14Q08ET2 396 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 SLC39A6Q13433 755 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 CARD16Q5EG05 197 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 FAM173BQ6P4H8 233 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 HIST2H3AQ71DI3 136 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 CHST4Q8NCG5 386 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 KLHDC9Q8NEP7 349 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 ZFP90Q8TF47 636 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 TSC22D3Q99576 134 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 ZNF334Q9HCZ1 680 aaPredicted RBP2.31□□□□□ -2.04
CHD1-201ENST00000284049 ACP6Q9NPH0 428 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 TMEM9BQ9NQ34 198 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 NUFIP1Q9UHK0 495 aaKnown RBP2.31□□□□□ -2.04
CHD1-201ENST00000284049 ZNF107Q9UII5 783 aaPredicted RBP2.31□□□□□ -2.04
CHD1-201ENST00000284049 PPIL1Q9Y3C6 166 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 STYXL1Q9Y6J8 313 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 LCTP09848 1927 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 K7EPK0 472 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 CRXO43186 299 aaPredicted RBP2.31□□□□□ -2.04
CHD1-201ENST00000284049 LMX1BO60663 402 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 DCTN3O75935 186 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 TTC4O95801 387 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 SERPINA1P01009 418 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 WARSP23381 471 aaKnown RBP2.31□□□□□ -2.04
CHD1-201ENST00000284049 POU3F4P49335 361 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 RAB31Q13636 194 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 KCNJ11Q14654 390 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 LTB4RQ15722 352 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 TRIQKQ629K1 86 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 ADAMTSL5Q6ZMM2 481 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 MDP1Q86V88 176 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 CCDC71Q8IV32 467 aaPredicted RBP2.31□□□□□ -2.04
CHD1-201ENST00000284049 FAM71E2Q8N5Q1 922 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 CDS1Q92903 461 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 CEP170P1Q96L14 293 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 PATZ1Q9HBE1 687 aaKnown RBP2.31□□□□□ -2.04
CHD1-201ENST00000284049 ORC6Q9Y5N6 252 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 MYH15Q9Y2K3 1946 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 A0A0G2JK05 382 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 A0A1W2PS18 150 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 SMIM1B2RUZ4 78 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 E5RJQ4 531 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 TNFSF11O14788 317 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 EFNA2O43921 213 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 GLSO94925 669 aaPredicted RBP2.31□□□□□ -2.04
CHD1-201ENST00000284049 RAB3BP20337 219 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 PRPS1L1P21108 318 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 CD38P28907 300 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 IDH2P48735 452 aaKnown RBP2.31□□□□□ -2.04
CHD1-201ENST00000284049 SERPINB8P50452 374 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 MS4A2Q01362 244 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 ZNF77Q15935 545 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 ZSWIM7Q19AV6 140 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 CLEC12BQ2HXU8 276 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 YIF1BQ5BJH7 314 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 ZNF773Q6PK81 442 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 RDH10Q8IZV5 341 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 ZNF519Q8TB69 540 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 DTD1Q8TEA8 209 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 C9orf85Q96MD7 179 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 KLHL21Q9UJP4 597 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 SPATA2Q9UM82 520 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 TBL2Q9Y4P3 447 aaKnown RBP2.31□□□□□ -2.04
CHD1-201ENST00000284049 NEDD4P46934 1319 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 KIR2DS1A0A191URI9 304 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 FTCDNL1E5RQL4 147 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 CDK1P06493 297 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 GGT2P36268 569 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 RPL29P47914 159 aaKnown RBP2.31□□□□□ -2.04
CHD1-201ENST00000284049 SSR4P51571 173 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 CD47Q08722 323 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 LAMTOR4Q0VGL1 99 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 DYNC1I2Q13409 638 aaKnown RBP2.31□□□□□ -2.04
CHD1-201ENST00000284049 KIR2DS1Q14954 304 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 METTL21CQ5VZV1 264 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 NADSYN1Q6IA69 706 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 ZNF788Q6ZQV5 615 aa2.31□□□□□ -2.04
CHD1-201ENST00000284049 TMED4Q7Z7H5 227 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms