RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 CCSO14618 274 aa10.13□□□□□ -0.79
USP6NL-201ENST00000277575 LIMS3P0CW19 117 aa10.13□□□□□ -0.79
USP6NL-201ENST00000277575 LIMS4P0CW20 117 aa10.13□□□□□ -0.79
USP6NL-201ENST00000277575 MRPS34P82930 218 aaKnown RBP10.13□□□□□ -0.79
USP6NL-201ENST00000277575 SLC25A35Q3KQZ1 300 aa10.13□□□□□ -0.79
USP6NL-201ENST00000277575 S100A7AQ86SG5 101 aa10.13□□□□□ -0.79
USP6NL-201ENST00000277575 GCNT2Q8N0V5 402 aa10.13□□□□□ -0.79
USP6NL-201ENST00000277575 FAM213BQ8TBF2 198 aa10.13□□□□□ -0.79
USP6NL-201ENST00000277575 RASL10BQ96S79 203 aa10.13□□□□□ -0.79
USP6NL-201ENST00000277575 CNTNAP3Q9BZ76 1288 aa10.13□□□□□ -0.79
USP6NL-201ENST00000277575 HIPK2Q9H2X6 1198 aa10.13□□□□□ -0.79
USP6NL-201ENST00000277575 TET1Q8NFU7 2136 aa10.13□□□□□ -0.79
USP6NL-201ENST00000277575 SCN4AP35499 1836 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 CDH23Q9H251 3354 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 TRBV5-3A0A0A0MS03 114 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 A8MXE2 369 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 CYR61O00622 381 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 MEOX1P50221 254 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 HES1Q14469 280 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 CD300LDQ6UXZ3 194 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 C1orf87Q8N0U7 546 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 CADM3Q8N126 398 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 C17orf50Q8WW18 174 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 MOGAT1Q96PD6 335 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 DDOQ99489 341 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 SSX3Q99909 188 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 ARPC5LQ9BPX5 153 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 ACACAQ13085 2346 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 SULT1C2O00338 296 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 ST8SIA3O43173 380 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 IGHA2P01877 340 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 SRD5A2P31213 254 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 S100A12P80511 92 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 DYRK1AQ13627 763 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 CTF1Q16619 201 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 SPATA46Q5T0L3 261 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 JMJD6Q6NYC1 403 aaPredicted RBP10.12□□□□□ -0.79
USP6NL-201ENST00000277575 SLC51BQ86UW2 128 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 OR1J1Q8NGS3 322 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 PCNPQ8WW12 178 aaKnown RBP10.12□□□□□ -0.79
USP6NL-201ENST00000277575 ZNF355PQ9NSJ1 428 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 SERTAD4Q9NUC0 356 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 TCFL5Q9UL49 500 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 C1orf196B1AJZ1 125 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 SMLR1H3BR10 107 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 CD3DP04234 171 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 OR5H8P0DN80 308 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 GNB3P16520 340 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 NME2P22392 152 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 CDKN2AP42771 156 aaKnown RBP10.12□□□□□ -0.79
USP6NL-201ENST00000277575 FAAP20Q6NZ36 180 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 EXOSC3Q9NQT5 275 aaKnown RBP10.12□□□□□ -0.79
USP6NL-201ENST00000277575 FLVCR1Q9Y5Y0 555 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 ZNFX1Q9P2E3 1918 aaKnown RBP10.12□□□□□ -0.79
USP6NL-201ENST00000277575 ANKRD33BA6NCL7 494 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 RER1O15258 196 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 NUPL2O15504 423 aaKnown RBP10.12□□□□□ -0.79
USP6NL-201ENST00000277575 ZFPL1O95159 310 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 PI3P19957 117 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 RFX2P48378 723 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 RAB11AP62491 216 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 ZNF266Q14584 549 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 CD226Q15762 336 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 CST9LP1Q5W188 147 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 B3GNTL1Q67FW5 361 aaPredicted RBP10.12□□□□□ -0.79
USP6NL-201ENST00000277575 OR10D3Q8NH80 312 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 FRZBQ92765 325 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 SLC23A1Q9UHI7 598 aa10.12□□□□□ -0.79
USP6NL-201ENST00000277575 ANGPTL7O43827 346 aa10.11□□□□□ -0.79
USP6NL-201ENST00000277575 SERPINF1P36955 418 aa10.11□□□□□ -0.79
USP6NL-201ENST00000277575 DDOSTP39656 456 aa10.11□□□□□ -0.79
USP6NL-201ENST00000277575 MC2RQ01718 297 aa10.11□□□□□ -0.79
USP6NL-201ENST00000277575 RNPS1Q15287 305 aaKnown RBP10.11□□□□□ -0.79
USP6NL-201ENST00000277575 BRICD5Q6PL45 260 aa10.11□□□□□ -0.79
USP6NL-201ENST00000277575 KANSL1Q7Z3B3 1105 aa10.11□□□□□ -0.79
USP6NL-201ENST00000277575 CT55Q8WUE5 264 aa10.11□□□□□ -0.79
USP6NL-201ENST00000277575 WISP3O95389 354 aaPredicted RBP10.11□□□□□ -0.79
USP6NL-201ENST00000277575 FGF9P31371 208 aaPredicted RBP10.11□□□□□ -0.79
USP6NL-201ENST00000277575 KIR2DL3P43628 341 aa10.11□□□□□ -0.79
USP6NL-201ENST00000277575 NKX2-1P43699 371 aaPredicted RBP10.11□□□□□ -0.79
USP6NL-201ENST00000277575 GSG1Q2KHT4 349 aa10.11□□□□□ -0.79
USP6NL-201ENST00000277575 WDR38Q5JTN6 314 aa10.11□□□□□ -0.79
USP6NL-201ENST00000277575 DRAM2Q6UX65 266 aa10.11□□□□□ -0.79
USP6NL-201ENST00000277575 PRSS42Q7Z5A4 293 aa10.11□□□□□ -0.79
USP6NL-201ENST00000277575 C4orf45Q96LM5 186 aa10.11□□□□□ -0.79
USP6NL-201ENST00000277575 FYTTD1Q96QD9 318 aaKnown RBP10.11□□□□□ -0.79
USP6NL-201ENST00000277575 UCK1Q9HA47 277 aa10.11□□□□□ -0.79
USP6NL-201ENST00000277575 C12orf10Q9HB07 376 aa10.11□□□□□ -0.79
USP6NL-201ENST00000277575 OR2M5A3KFT3 312 aa10.11□□□□□ -0.79
USP6NL-201ENST00000277575 HRKO00198 91 aa10.11□□□□□ -0.79
USP6NL-201ENST00000277575 EPPINO95925 133 aa10.11□□□□□ -0.79
USP6NL-201ENST00000277575 APOA2P02652 100 aa10.11□□□□□ -0.79
USP6NL-201ENST00000277575 PPT1P50897 306 aa10.11□□□□□ -0.79
USP6NL-201ENST00000277575 BAXQ07812 192 aa10.11□□□□□ -0.79
USP6NL-201ENST00000277575 DEGS2Q6QHC5 323 aa10.11□□□□□ -0.79
USP6NL-201ENST00000277575 ZNF321PQ8N8H1 164 aa10.11□□□□□ -0.79
USP6NL-201ENST00000277575 OR8D4Q8NGM9 314 aa10.11□□□□□ -0.79
USP6NL-201ENST00000277575 MALSU1Q96EH3 234 aa10.11□□□□□ -0.79
USP6NL-201ENST00000277575 PTDSS2Q9BVG9 487 aa10.11□□□□□ -0.79
USP6NL-201ENST00000277575 RIMS4Q9H426 269 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms