RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 C7orf61Q8IZ16 206 aa24.4■■□□□ 1.5
CBX4-201ENST00000269397 OR5D14Q8NGL3 314 aa24.4■■□□□ 1.5
CBX4-201ENST00000269397 RHOFQ9HBH0 211 aa24.4■■□□□ 1.5
CBX4-201ENST00000269397 CTSFQ9UBX1 484 aa24.4■■□□□ 1.5
CBX4-201ENST00000269397 MED12Q93074 2177 aa24.4■■□□□ 1.5
CBX4-201ENST00000269397 CEP290O15078 2479 aa24.39■■□□□ 1.5
CBX4-201ENST00000269397 RAD51DO75771 328 aa24.39■■□□□ 1.5
CBX4-201ENST00000269397 ELAVL1Q15717 326 aaKnown RBP24.39■■□□□ 1.5
CBX4-201ENST00000269397 C9orf50Q5SZB4 431 aa24.39■■□□□ 1.5
CBX4-201ENST00000269397 KLHL24Q6TFL4 600 aa24.39■■□□□ 1.5
CBX4-201ENST00000269397 DEFB119Q8N690 84 aa24.39■■□□□ 1.5
CBX4-201ENST00000269397 OR10S1Q8NGN2 331 aa24.39■■□□□ 1.5
CBX4-201ENST00000269397 MAFIPQ8WZ33 124 aa24.39■■□□□ 1.5
CBX4-201ENST00000269397 KCNK17Q96T54 332 aa24.39■■□□□ 1.5
CBX4-201ENST00000269397 TMEM106CQ9BVX2 250 aa24.39■■□□□ 1.5
CBX4-201ENST00000269397 METTL8Q9H825 291 aaKnown RBP24.39■■□□□ 1.5
CBX4-201ENST00000269397 ZFP57Q9NU63 452 aa24.39■■□□□ 1.5
CBX4-201ENST00000269397 WBP1LQ9NX94 342 aa24.39■■□□□ 1.5
CBX4-201ENST00000269397 LPAR3Q9UBY5 353 aa24.39■■□□□ 1.5
CBX4-201ENST00000269397 CNTRLQ7Z7A1 2325 aa24.39■■□□□ 1.5
CBX4-201ENST00000269397 A0A1W2PQD3 144 aa24.39■■□□□ 1.49
CBX4-201ENST00000269397 MEX3AA1L020 520 aaKnown RBP24.39■■□□□ 1.49
CBX4-201ENST00000269397 SDCBPO00560 298 aaPredicted RBP24.39■■□□□ 1.49
CBX4-201ENST00000269397 OR3A4PP47883 348 aa24.39■■□□□ 1.49
CBX4-201ENST00000269397 NAAAQ02083 359 aa24.39■■□□□ 1.49
CBX4-201ENST00000269397 SLC29A4Q7RTT9 530 aa24.39■■□□□ 1.49
CBX4-201ENST00000269397 THAP3Q8WTV1 239 aaPredicted RBP24.39■■□□□ 1.49
CBX4-201ENST00000269397 BIN3Q9NQY0 253 aa24.39■■□□□ 1.49
CBX4-201ENST00000269397 TMEM14DPA8MWL7 114 aa24.38■■□□□ 1.49
CBX4-201ENST00000269397 H3BML4 177 aa24.38■■□□□ 1.49
CBX4-201ENST00000269397 B2MP61769 119 aa24.38■■□□□ 1.49
CBX4-201ENST00000269397 SUPT4H1P63272 117 aaKnown RBP24.38■■□□□ 1.49
CBX4-201ENST00000269397 TDGQ13569 410 aa24.38■■□□□ 1.49
CBX4-201ENST00000269397 RAB32Q13637 225 aa24.38■■□□□ 1.49
CBX4-201ENST00000269397 RBM39Q14498 530 aaKnown RBP24.38■■□□□ 1.49
CBX4-201ENST00000269397 CHCHD2P9Q5T1J5 151 aaPredicted RBP24.38■■□□□ 1.49
CBX4-201ENST00000269397 DNM1P34Q6PK57 102 aa24.38■■□□□ 1.49
CBX4-201ENST00000269397 NUBPLQ8TB37 319 aa24.38■■□□□ 1.49
CBX4-201ENST00000269397 GLYATL2Q8WU03 294 aa24.38■■□□□ 1.49
CBX4-201ENST00000269397 RAB3CQ96E17 227 aa24.38■■□□□ 1.49
CBX4-201ENST00000269397 C5orf34Q96MH7 638 aa24.38■■□□□ 1.49
CBX4-201ENST00000269397 SEC11CQ9BY50 192 aa24.38■■□□□ 1.49
CBX4-201ENST00000269397 GPR132Q9UNW8 380 aa24.38■■□□□ 1.49
CBX4-201ENST00000269397 RCC1P18754 421 aaPredicted RBP24.38■■□□□ 1.49
CBX4-201ENST00000269397 CBX5P45973 191 aa24.38■■□□□ 1.49
CBX4-201ENST00000269397 TAS2R31P59538 309 aa24.38■■□□□ 1.49
CBX4-201ENST00000269397 S100A10P60903 97 aa24.38■■□□□ 1.49
CBX4-201ENST00000269397 CYCSP99999 105 aaKnown RBP24.38■■□□□ 1.49
CBX4-201ENST00000269397 PCK2Q16822 640 aa24.38■■□□□ 1.49
CBX4-201ENST00000269397 C1orf189Q5VU69 101 aa24.38■■□□□ 1.49
CBX4-201ENST00000269397 PGAP1Q75T13 922 aa24.38■■□□□ 1.49
CBX4-201ENST00000269397 OR10H5Q8NGA6 315 aa24.38■■□□□ 1.49
CBX4-201ENST00000269397 NRIP2Q9BQI9 281 aa24.38■■□□□ 1.49
CBX4-201ENST00000269397 LDHAL6BQ9BYZ2 381 aaPredicted RBP24.38■■□□□ 1.49
CBX4-201ENST00000269397 FLVCR1Q9Y5Y0 555 aa24.38■■□□□ 1.49
CBX4-201ENST00000269397 IGHV3-20A0A0C4DH32 117 aa24.38■■□□□ 1.49
CBX4-201ENST00000269397 OPN1LWP04000 364 aa24.38■■□□□ 1.49
CBX4-201ENST00000269397 SERPINA5P05154 406 aa24.38■■□□□ 1.49
CBX4-201ENST00000269397 ID4P47928 161 aa24.38■■□□□ 1.49
CBX4-201ENST00000269397 TLE3Q04726 772 aa24.38■■□□□ 1.49
CBX4-201ENST00000269397 DRAM2Q6UX65 266 aa24.38■■□□□ 1.49
CBX4-201ENST00000269397 RLN3Q8WXF3 142 aa24.38■■□□□ 1.49
CBX4-201ENST00000269397 MESP1Q9BRJ9 268 aa24.38■■□□□ 1.49
CBX4-201ENST00000269397 UQCC2Q9BRT2 126 aa24.38■■□□□ 1.49
CBX4-201ENST00000269397 MRPS28Q9Y2Q9 187 aaKnown RBP24.38■■□□□ 1.49
CBX4-201ENST00000269397 MMACHCQ9Y4U1 282 aa24.38■■□□□ 1.49
CBX4-201ENST00000269397 LRP3O75074 770 aa24.37■■□□□ 1.49
CBX4-201ENST00000269397 NME2P22392 152 aa24.37■■□□□ 1.49
CBX4-201ENST00000269397 HSF1Q00613 529 aa24.37■■□□□ 1.49
CBX4-201ENST00000269397 DLX2Q07687 328 aaPredicted RBP24.37■■□□□ 1.49
CBX4-201ENST00000269397 PNLIPRP3Q17RR3 467 aa24.37■■□□□ 1.49
CBX4-201ENST00000269397 ETV3LQ6ZN32 361 aa24.37■■□□□ 1.49
CBX4-201ENST00000269397 LANCL3Q6ZV70 420 aa24.37■■□□□ 1.49
CBX4-201ENST00000269397 KLHDC7BQ96G42 594 aa24.37■■□□□ 1.49
CBX4-201ENST00000269397 LINC01387J3KSC0 135 aa24.37■■□□□ 1.49
CBX4-201ENST00000269397 MBTPS2O43462 519 aa24.37■■□□□ 1.49
CBX4-201ENST00000269397 SFT2D2O95562 160 aa24.37■■□□□ 1.49
CBX4-201ENST00000269397 HOXB5P09067 269 aa24.37■■□□□ 1.49
CBX4-201ENST00000269397 ZNF20P17024 532 aa24.37■■□□□ 1.49
CBX4-201ENST00000269397 BIDP55957 195 aa24.37■■□□□ 1.49
CBX4-201ENST00000269397 TMEM50BP56557 158 aa24.37■■□□□ 1.49
CBX4-201ENST00000269397 FOXK1P85037 733 aa24.37■■□□□ 1.49
CBX4-201ENST00000269397 ST6GALNAC5Q9BVH7 336 aa24.37■■□□□ 1.49
CBX4-201ENST00000269397 RCC2Q9P258 522 aaKnown RBP24.37■■□□□ 1.49
CBX4-201ENST00000269397 COPS7AQ9UBW8 275 aa24.37■■□□□ 1.49
CBX4-201ENST00000269397 ATPIF1Q9UII2 106 aa24.37■■□□□ 1.49
CBX4-201ENST00000269397 A6NIZ1 184 aa24.36■■□□□ 1.49
CBX4-201ENST00000269397 GLRA1P23415 457 aa24.36■■□□□ 1.49
CBX4-201ENST00000269397 LPAR6P43657 344 aa24.36■■□□□ 1.49
CBX4-201ENST00000269397 RAP1BP61224 184 aa24.36■■□□□ 1.49
CBX4-201ENST00000269397 RAP1AP62834 184 aa24.36■■□□□ 1.49
CBX4-201ENST00000269397 AVPI1Q5T686 147 aa24.36■■□□□ 1.49
CBX4-201ENST00000269397 KIAA0895LQ68EN5 471 aa24.36■■□□□ 1.49
CBX4-201ENST00000269397 RPL7L1Q6DKI1 246 aaKnown RBP24.36■■□□□ 1.49
CBX4-201ENST00000269397 PRSS54Q6PEW0 395 aa24.36■■□□□ 1.49
CBX4-201ENST00000269397 LMX1AQ8TE12 382 aa24.36■■□□□ 1.49
CBX4-201ENST00000269397 ARHGAP5-AS1Q96IT6 56 aa24.36■■□□□ 1.49
CBX4-201ENST00000269397 SEC61A2Q9H9S3 476 aa24.36■■□□□ 1.49
CBX4-201ENST00000269397 AKR1C3P42330 323 aa24.36■■□□□ 1.49
CBX4-201ENST00000269397 DCAF7P61962 342 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms