RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 TEX30Q5JUR7 227 aa8.12□□□□□ -1.11
VPS41-201ENST00000265745 ZBTB37Q5TC79 503 aa8.12□□□□□ -1.11
VPS41-201ENST00000265745 LCN8Q6JVE9 175 aa8.12□□□□□ -1.11
VPS41-201ENST00000265745 LYPD4Q6UWN0 246 aa8.12□□□□□ -1.11
VPS41-201ENST00000265745 DRAM2Q6UX65 266 aa8.12□□□□□ -1.11
VPS41-201ENST00000265745 LRRN1Q6UXK5 716 aa8.12□□□□□ -1.11
VPS41-201ENST00000265745 MRPL21Q7Z2W9 205 aaKnown RBP8.12□□□□□ -1.11
VPS41-201ENST00000265745 DCXRQ7Z4W1 244 aa8.12□□□□□ -1.11
VPS41-201ENST00000265745 DHFR2Q86XF0 187 aa8.12□□□□□ -1.11
VPS41-201ENST00000265745 ARHGAP24Q8N264 748 aa8.12□□□□□ -1.11
VPS41-201ENST00000265745 SIGLECL1Q8N7X8 197 aa8.12□□□□□ -1.11
VPS41-201ENST00000265745 C3orf56Q8N813 242 aa8.12□□□□□ -1.11
VPS41-201ENST00000265745 OR9Q1Q8NGQ5 310 aa8.12□□□□□ -1.11
VPS41-201ENST00000265745 RAB40AQ8WXH6 277 aa8.12□□□□□ -1.11
VPS41-201ENST00000265745 NEIL1Q96FI4 390 aaPredicted RBP8.12□□□□□ -1.11
VPS41-201ENST00000265745 PLEKHA8Q96JA3 519 aa8.12□□□□□ -1.11
VPS41-201ENST00000265745 CCT8L2Q96SF2 557 aa8.12□□□□□ -1.11
VPS41-201ENST00000265745 DGCR6LQ9BY27 220 aa8.12□□□□□ -1.11
VPS41-201ENST00000265745 MUC13Q9H3R2 512 aa8.12□□□□□ -1.11
VPS41-201ENST00000265745 MAGIXQ9H6Y5 334 aa8.12□□□□□ -1.11
VPS41-201ENST00000265745 TBC1D23Q9NUY8 699 aa8.12□□□□□ -1.11
VPS41-201ENST00000265745 VNN3Q9NY84 501 aa8.12□□□□□ -1.11
VPS41-201ENST00000265745 COMMD3-BMI1R4GMX3 469 aa8.12□□□□□ -1.11
VPS41-201ENST00000265745 IGHV2-70DA0A0C4DH43 119 aa8.11□□□□□ -1.11
VPS41-201ENST00000265745 TMPRSS2O15393 492 aa8.11□□□□□ -1.11
VPS41-201ENST00000265745 GMDSO60547 372 aa8.11□□□□□ -1.11
VPS41-201ENST00000265745 FAM20BO75063 409 aa8.11□□□□□ -1.11
VPS41-201ENST00000265745 IRF2P14316 349 aa8.11□□□□□ -1.11
VPS41-201ENST00000265745 SPI1P17947 270 aa8.11□□□□□ -1.11
VPS41-201ENST00000265745 PRTN3P24158 256 aa8.11□□□□□ -1.11
VPS41-201ENST00000265745 FMO3P31513 532 aa8.11□□□□□ -1.11
VPS41-201ENST00000265745 PITPNBP48739 271 aa8.11□□□□□ -1.11
VPS41-201ENST00000265745 ENTPD1P49961 510 aa8.11□□□□□ -1.11
VPS41-201ENST00000265745 GNB2P62879 340 aa8.11□□□□□ -1.11
VPS41-201ENST00000265745 OR8G1Q15617 311 aa8.11□□□□□ -1.11
VPS41-201ENST00000265745 AWAT1Q58HT5 328 aa8.11□□□□□ -1.11
VPS41-201ENST00000265745 GLYATL3Q5SZD4 288 aa8.11□□□□□ -1.11
VPS41-201ENST00000265745 PRAMEF6Q5VXH4 476 aa8.11□□□□□ -1.11
VPS41-201ENST00000265745 OR2T5Q6IEZ7 315 aa8.11□□□□□ -1.11
VPS41-201ENST00000265745 LYPD2Q6UXB3 125 aa8.11□□□□□ -1.11
VPS41-201ENST00000265745 BTNL3Q6UXE8 466 aa8.11□□□□□ -1.11
VPS41-201ENST00000265745 CD300LDQ6UXZ3 194 aa8.11□□□□□ -1.11
VPS41-201ENST00000265745 ZNF841Q6ZN19 808 aa8.11□□□□□ -1.11
VPS41-201ENST00000265745 DCDC5Q6ZRR9 648 aa8.11□□□□□ -1.11
VPS41-201ENST00000265745 OR2T33Q8NG76 320 aa8.11□□□□□ -1.11
VPS41-201ENST00000265745 OR8B3Q8NGG8 313 aa8.11□□□□□ -1.11
VPS41-201ENST00000265745 OR11L1Q8NGX0 322 aa8.11□□□□□ -1.11
VPS41-201ENST00000265745 OR2T29Q8NH02 315 aa8.11□□□□□ -1.11
VPS41-201ENST00000265745 OR4Q3Q8NH05 313 aa8.11□□□□□ -1.11
VPS41-201ENST00000265745 OR2AE1Q8NHA4 323 aa8.11□□□□□ -1.11
VPS41-201ENST00000265745 UPRTQ96BW1 309 aa8.11□□□□□ -1.11
VPS41-201ENST00000265745 SLAMF6Q96DU3 332 aa8.11□□□□□ -1.11
VPS41-201ENST00000265745 C1orf147Q96MC9 270 aaPredicted RBP8.11□□□□□ -1.11
VPS41-201ENST00000265745 ZNF48Q96MX3 618 aaPredicted RBP8.11□□□□□ -1.11
VPS41-201ENST00000265745 OR8B2Q96RD0 313 aa8.11□□□□□ -1.11
VPS41-201ENST00000265745 KCNJ15Q99712 375 aa8.11□□□□□ -1.11
VPS41-201ENST00000265745 COPS4Q9BT78 406 aa8.11□□□□□ -1.11
VPS41-201ENST00000265745 REEP1Q9H902 201 aa8.11□□□□□ -1.11
VPS41-201ENST00000265745 CENPMQ9NSP4 180 aa8.11□□□□□ -1.11
VPS41-201ENST00000265745 UFSP2Q9NUQ7 469 aa8.11□□□□□ -1.11
VPS41-201ENST00000265745 MRPL15Q9P015 296 aaKnown RBP8.11□□□□□ -1.11
VPS41-201ENST00000265745 BAIAP2Q9UQB8 552 aa8.11□□□□□ -1.11
VPS41-201ENST00000265745 NOP16Q9Y3C1 178 aaKnown RBP8.11□□□□□ -1.11
VPS41-201ENST00000265745 SAMHD1Q9Y3Z3 626 aaKnown RBP8.11□□□□□ -1.11
VPS41-201ENST00000265745 U3KQV3 271 aa8.11□□□□□ -1.11
VPS41-201ENST00000265745 GGT3PA6NGU5 568 aa8.1□□□□□ -1.11
VPS41-201ENST00000265745 PHYHO14832 338 aa8.1□□□□□ -1.11
VPS41-201ENST00000265745 TNFRSF13BO14836 293 aaPredicted RBP8.1□□□□□ -1.11
VPS41-201ENST00000265745 SOX14O95416 240 aa8.1□□□□□ -1.11
VPS41-201ENST00000265745 PLATP00750 562 aa8.1□□□□□ -1.11
VPS41-201ENST00000265745 GYPBP06028 91 aa8.1□□□□□ -1.11
VPS41-201ENST00000265745 SPARCP09486 303 aa8.1□□□□□ -1.11
VPS41-201ENST00000265745 T-ENOLP0DO92 83 aa8.1□□□□□ -1.11
VPS41-201ENST00000265745 IGHV4-38-2P0DP08 117 aa8.1□□□□□ -1.11
VPS41-201ENST00000265745 HKR1P10072 659 aa8.1□□□□□ -1.11
VPS41-201ENST00000265745 CLUP10909 449 aa8.1□□□□□ -1.11
VPS41-201ENST00000265745 EGR1P18146 543 aa8.1□□□□□ -1.11
VPS41-201ENST00000265745 PSMB10P40306 273 aa8.1□□□□□ -1.11
VPS41-201ENST00000265745 PRKXP51817 358 aa8.1□□□□□ -1.11
VPS41-201ENST00000265745 BLVRAP53004 296 aa8.1□□□□□ -1.11
VPS41-201ENST00000265745 HOXA4Q00056 320 aaPredicted RBP8.1□□□□□ -1.11
VPS41-201ENST00000265745 TAF13Q15543 124 aa8.1□□□□□ -1.11
VPS41-201ENST00000265745 FAM98BQ52LJ0 330 aaKnown RBP8.1□□□□□ -1.11
VPS41-201ENST00000265745 LINC01590Q5TEZ4 76 aa8.1□□□□□ -1.11
VPS41-201ENST00000265745 WDR25Q64LD2 544 aaPredicted RBP8.1□□□□□ -1.11
VPS41-201ENST00000265745 C9orf139Q6ZV77 190 aa8.1□□□□□ -1.11
VPS41-201ENST00000265745 SPERTQ8NA61 448 aa8.1□□□□□ -1.11
VPS41-201ENST00000265745 C19orf18Q8NEA5 215 aa8.1□□□□□ -1.11
VPS41-201ENST00000265745 SPSB4Q96A44 273 aa8.1□□□□□ -1.11
VPS41-201ENST00000265745 ZMYND19Q96E35 227 aaPredicted RBP8.1□□□□□ -1.11
VPS41-201ENST00000265745 DUX5Q96PT3 197 aa8.1□□□□□ -1.11
VPS41-201ENST00000265745 NUDT16L1Q9BRJ7 211 aaKnown RBP8.1□□□□□ -1.11
VPS41-201ENST00000265745 MS4A7Q9GZW8 240 aaPredicted RBP8.1□□□□□ -1.11
VPS41-201ENST00000265745 FN3KRPQ9HA64 309 aa8.1□□□□□ -1.11
VPS41-201ENST00000265745 CMC2Q9NRP2 79 aa8.1□□□□□ -1.11
VPS41-201ENST00000265745 ARMC1Q9NVT9 282 aa8.1□□□□□ -1.11
VPS41-201ENST00000265745 RNF7Q9UBF6 113 aa8.1□□□□□ -1.11
VPS41-201ENST00000265745 CLN8Q9UBY8 286 aa8.1□□□□□ -1.11
VPS41-201ENST00000265745 SOX21Q9Y651 276 aaPredicted RBP8.1□□□□□ -1.11
VPS41-201ENST00000265745 ARHGAP32A7KAX9 2087 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms