RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 FAM103A1Q9BTL3 118 aaKnown RBP5.2□□□□□ -1.58
VCAN-201ENST00000265077 ADAT1Q9BUB4 502 aaKnown RBP5.2□□□□□ -1.58
VCAN-201ENST00000265077 BOKQ9UMX3 212 aaPredicted RBP5.2□□□□□ -1.58
VCAN-201ENST00000265077 C7orf66A4D0T2 115 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 A6NDN8 102 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 SLC22A20A6NK97 555 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 H3BML4 177 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 GP1BAP07359 652 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 PSMB3P49720 205 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 HABP2Q14520 560 aaPredicted RBP5.2□□□□□ -1.58
VCAN-201ENST00000265077 ELAVL1Q15717 326 aaKnown RBP5.2□□□□□ -1.58
VCAN-201ENST00000265077 HSF5Q4G112 596 aaPredicted RBP5.2□□□□□ -1.58
VCAN-201ENST00000265077 MMP21Q8N119 569 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 OR13D1Q8NGV5 346 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 FAM174AQ8TBP5 190 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 APH1AQ96BI3 265 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 GLIPR2Q9H4G4 154 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 NTMQ9P121 344 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 CYR61O00622 381 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 ARG1P05089 322 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 MTHFD2P13995 350 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 MSX1P28360 303 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 SHC1P29353 583 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 GPX4P36969 197 aaPredicted RBP5.2□□□□□ -1.58
VCAN-201ENST00000265077 ENDOGQ14249 297 aaKnown RBP5.2□□□□□ -1.58
VCAN-201ENST00000265077 MIDNQ504T8 468 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 GLYATL3Q5SZD4 288 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 NECAP1Q8NC96 275 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 SMIM19Q96E16 107 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 ADOQ96SZ5 270 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 SLC46A2Q9BY10 475 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 LTB4R2Q9NPC1 389 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 ACER3Q9NUN7 267 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 NAGKQ9UJ70 344 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 B3GALT5Q9Y2C3 310 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 PAM16Q9Y3D7 125 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 ZBTB42B2RXF5 422 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 ITGB2P05107 769 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 JMJD7P0C870 316 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 ZNF28P17035 718 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 SLC35A1P78382 337 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 YOD1Q5VVQ6 348 aaPredicted RBP5.2□□□□□ -1.58
VCAN-201ENST00000265077 FAM57BQ71RH2 274 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 ZNF429Q86V71 674 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 OR52E1Q8NGJ3 308 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 TSACCQ96A04 125 aaPredicted RBP5.2□□□□□ -1.58
VCAN-201ENST00000265077 SDSLQ96GA7 329 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 FOXN4Q96NZ1 517 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 DENND4AQ7Z401 1863 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 GREM1O60565 184 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 ZFAND5O76080 213 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 SEMA4FO95754 770 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 NTF3P20783 257 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 UBE2MP61081 183 aaKnown RBP5.2□□□□□ -1.58
VCAN-201ENST00000265077 RPS18P62269 152 aaKnown RBP5.2□□□□□ -1.58
VCAN-201ENST00000265077 ZNF485Q8NCK3 441 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 SLC26A10Q8NG04 563 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 FAM3DQ96BQ1 224 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 PAPPAQ13219 1627 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 TRBV11-1A0A0K0K1C0 115 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 CLDN34H7C241 214 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 FXYD1O00168 92 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 RAB38P57729 211 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 FABP5Q01469 135 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 IHHQ14623 411 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 MRM1Q6IN84 353 aaKnown RBP5.2□□□□□ -1.58
VCAN-201ENST00000265077 GCNT2Q8N0V5 402 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 OR5AP2Q8NGF4 316 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 NIPSNAP1Q9BPW8 284 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 SEMA6CQ9H3T2 930 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 DHCR7Q9UBM7 475 aaKnown RBP5.2□□□□□ -1.58
VCAN-201ENST00000265077 UQCR10Q9UDW1 63 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 EMC9Q9Y3B6 208 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 ZNF646O15015 1829 aaPredicted RBP5.2□□□□□ -1.58
VCAN-201ENST00000265077 TGIF2-C20orf24A0A0A6YYL0 155 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 A0A1B0GWA3 101 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 NPBWR1P48145 328 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 DOC2BQ14184 412 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 HIST3H3Q16695 136 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 CATSPERDQ86XM0 798 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 STARD4Q96DR4 205 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 HDAC8Q9BY41 377 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 SELENOIQ9C0D9 397 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 P2RY12Q9H244 342 aa5.2□□□□□ -1.58
VCAN-201ENST00000265077 A0A1W2PPE2 198 aa5.19□□□□□ -1.58
VCAN-201ENST00000265077 PRSS38A1L453 326 aa5.19□□□□□ -1.58
VCAN-201ENST00000265077 RECKO95980 971 aa5.19□□□□□ -1.58
VCAN-201ENST00000265077 CD79AP11912 226 aa5.19□□□□□ -1.58
VCAN-201ENST00000265077 HLA-DOBP13765 273 aa5.19□□□□□ -1.58
VCAN-201ENST00000265077 DPP4P27487 766 aa5.19□□□□□ -1.58
VCAN-201ENST00000265077 CRYBB2P43320 205 aa5.19□□□□□ -1.58
VCAN-201ENST00000265077 CATR1Q13166 79 aa5.19□□□□□ -1.58
VCAN-201ENST00000265077 SQSTM1Q13501 440 aa5.19□□□□□ -1.58
VCAN-201ENST00000265077 ZNF626Q68DY1 528 aa5.19□□□□□ -1.58
VCAN-201ENST00000265077 NRIP2Q9BQI9 281 aa5.19□□□□□ -1.58
VCAN-201ENST00000265077 MS4A8Q9BY19 250 aa5.19□□□□□ -1.58
VCAN-201ENST00000265077 KCNMB2Q9Y691 235 aa5.19□□□□□ -1.58
VCAN-201ENST00000265077 CCDC187A0A096LP49 1063 aa5.19□□□□□ -1.58
VCAN-201ENST00000265077 KDM4EB2RXH2 506 aaPredicted RBP5.19□□□□□ -1.58
VCAN-201ENST00000265077 H0YGG7 62 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms