RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 BLOC1S1P78537 153 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 MYBPHQ13203 477 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 PAN3Q58A45 887 aaKnown RBP8.09□□□□□ -1.11
MSH4-201ENST00000263187 BRICD5Q6PL45 260 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 PUSL1Q8N0Z8 303 aaKnown RBP8.09□□□□□ -1.11
MSH4-201ENST00000263187 OR10G3Q8NGC4 313 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 SLC22A11Q9NSA0 550 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 FAM206AQ9NX38 181 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 MRPS28Q9Y2Q9 187 aaKnown RBP8.09□□□□□ -1.11
MSH4-201ENST00000263187 NUP210LQ5VU65 1888 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 FBXO24O75426 580 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 NFYBP25208 207 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 CCR5P51681 352 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 PNLIPRP2P54317 469 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 ZNF121P58317 390 aaPredicted RBP8.09□□□□□ -1.11
MSH4-201ENST00000263187 FGL1Q08830 312 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 AIMP2Q13155 320 aaKnown RBP8.09□□□□□ -1.11
MSH4-201ENST00000263187 NKAPLQ5M9Q1 402 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 PDSS1Q5T2R2 415 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 LCN10Q6JVE6 187 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 ZNF283Q8N7M2 679 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 PNLDC1Q8NA58 520 aaKnown RBP8.09□□□□□ -1.11
MSH4-201ENST00000263187 OR4K17Q8NGC6 315 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 OR5D14Q8NGL3 314 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 RAB3CQ96E17 227 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 ZNF285Q96NJ3 590 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 CCNL2Q96S94 520 aaPredicted RBP8.09□□□□□ -1.11
MSH4-201ENST00000263187 KCNK17Q96T54 332 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 AIFM2Q9BRQ8 373 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 ALX4Q9H161 411 aaPredicted RBP8.09□□□□□ -1.11
MSH4-201ENST00000263187 SERINC1Q9NRX5 453 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 HPF1Q9NWY4 346 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 MMACHCQ9Y4U1 282 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 IGHV1OR21-1A0A087WYE8 117 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 A0A1B0GTQ1 180 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 MEGF11A6BM72 1044 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 CD74P04233 296 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 ADCYAP1P18509 176 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 RCC1P18754 421 aaPredicted RBP8.09□□□□□ -1.11
MSH4-201ENST00000263187 SERPINA2P20848 420 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 PSMB6P28072 239 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 CHAF1BQ13112 559 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 ZNF585AQ6P3V2 769 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 MOB3CQ70IA8 216 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 SLC22A24Q8N4F4 322 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 ZSCAN4Q8NAM6 433 aaPredicted RBP8.09□□□□□ -1.11
MSH4-201ENST00000263187 OR5AP2Q8NGF4 316 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 MITD1Q8WV92 249 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 SCPEP1Q9HB40 452 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 SLC17A5Q9NRA2 495 aa8.09□□□□□ -1.11
MSH4-201ENST00000263187 ZNF701Q9NV72 531 aaPredicted RBP8.09□□□□□ -1.11
MSH4-201ENST00000263187 BLACEA4D250 179 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 VSTM2BA6NLU5 285 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 OR2J2O76002 312 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 ATG12O94817 140 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 CD8AP01732 235 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 HEXBP07686 556 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 SCAND1P57086 179 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 TDGQ13569 410 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 MEF2DQ14814 521 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 DRAM2Q6UX65 266 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 TMEM17Q86X19 198 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 OR2AJ1Q8NGZ0 328 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 RNF133Q8WVZ7 376 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 SLC39A7Q92504 469 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 OR10C1Q96KK4 312 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 JSRP1Q96MG2 331 aaPredicted RBP8.08□□□□□ -1.12
MSH4-201ENST00000263187 HDHD3Q9BSH5 251 aaPredicted RBP8.08□□□□□ -1.12
MSH4-201ENST00000263187 TLNRD1Q9H1K6 362 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 C8orf33Q9H7E9 229 aaPredicted RBP8.08□□□□□ -1.12
MSH4-201ENST00000263187 METTL7AQ9H8H3 244 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 CHST11Q9NPF2 352 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 RHBDD3Q9Y3P4 386 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 LHFPL6Q9Y693 200 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 NCOA6Q14686 2063 aaPredicted RBP8.08□□□□□ -1.12
MSH4-201ENST00000263187 SULT1C2O00338 296 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 BET1O15155 118 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 OR2F2O95006 317 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 SCGB1D2O95969 90 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 SERPINA5P05154 406 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 GLULP15104 373 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 AMY2BP19961 511 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 DAP3P51398 398 aaKnown RBP8.08□□□□□ -1.12
MSH4-201ENST00000263187 TMEM50BP56557 158 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 OR2F1Q13607 317 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 PDCD1Q15116 288 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 TMEM176BQ3YBM2 270 aaPredicted RBP8.08□□□□□ -1.12
MSH4-201ENST00000263187 C1orf100Q5SVJ3 147 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 HAGHLQ6PII5 290 aaPredicted RBP8.08□□□□□ -1.12
MSH4-201ENST00000263187 DNM1P34Q6PK57 102 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 ETV3LQ6ZN32 361 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 DTX1Q86Y01 620 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 LDLRAD3Q86YD5 345 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 OR8B12Q8NGG6 310 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 OR51T1Q8NGJ9 327 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 TMEM234Q8WY98 164 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 PIGTQ969N2 578 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 EDEM2Q9BV94 578 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 LPAR5Q9H1C0 372 aa8.08□□□□□ -1.12
MSH4-201ENST00000263187 C5orf66Q9H5L9 145 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms