RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 FOXJ3Q9UPW0 622 aa10.91□□□□□ -0.66
SMG6-201ENST00000263073 M0R135 149 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 NRASP01111 189 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 FAHP16930 419 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 GLRA1P23415 457 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 ZNF92Q03936 586 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 OR8G1Q15617 311 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 TBC1D28Q2M2D7 210 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 TMEM52BQ4KMG9 183 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 UBE3DQ7Z6J8 389 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 ETFBKMTQ8IXQ9 262 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 OR11L1Q8NGX0 322 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 CNRIP1Q96F85 164 aaPredicted RBP10.9□□□□□ -0.66
SMG6-201ENST00000263073 ZNF799Q96GE5 643 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 ARHGDIGQ99819 225 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 PBX4Q9BYU1 374 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 R4GMQ9 66 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 LTBP4Q8N2S1 1624 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 GPR31O00270 319 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 S100A8P05109 93 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 MMP7P09237 267 aaPredicted RBP10.9□□□□□ -0.66
SMG6-201ENST00000263073 DAOP14920 347 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 ST6GAL1P15907 406 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 HAAOP46952 286 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 RNF212Q495C1 297 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 DND1Q8IYX4 353 aaKnown RBP10.9□□□□□ -0.66
SMG6-201ENST00000263073 ANKRD53Q8N9V6 530 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 DTWD2Q8NBA8 298 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 UCK1Q9HA47 277 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 C20orf141Q9NUB4 165 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 STRAPQ9Y3F4 350 aaKnown RBP10.9□□□□□ -0.66
SMG6-201ENST00000263073 PRRC2BQ5JSZ5 2229 aaKnown RBP10.9□□□□□ -0.66
SMG6-201ENST00000263073 BTAF1O14981 1849 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 MEIKINA0A087WXM9 373 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 METAP1P53582 386 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 PTTG1IPP53801 180 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 RUNX2Q13950 521 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 CLLU1Q5K131 121 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 CA13Q8N1Q1 262 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 ISOC2Q96AB3 205 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 TMEM18Q96B42 140 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 FGF20Q9NP95 211 aaPredicted RBP10.9□□□□□ -0.66
SMG6-201ENST00000263073 OBP2AQ9NY56 170 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 OR51B4Q9Y5P0 310 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 STRCQ7RTU9 1775 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 hCG_1809904A0A1W2PP81 198 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 A0A1W2PR64 198 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 A0A1W2PRV1 198 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 GLSO94925 669 aaPredicted RBP10.9□□□□□ -0.66
SMG6-201ENST00000263073 SLC37A1P57057 533 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 PARM1Q6UWI2 310 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 EXD3Q8N9H8 876 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 OR10P1Q8NGE3 313 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 RTN4IP1Q8WWV3 396 aaPredicted RBP10.9□□□□□ -0.66
SMG6-201ENST00000263073 MED18Q9BUE0 208 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 ACTR3CQ9C0K3 210 aaPredicted RBP10.9□□□□□ -0.66
SMG6-201ENST00000263073 TWSG1Q9GZX9 223 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 RIMS4Q9H426 269 aaPredicted RBP10.9□□□□□ -0.66
SMG6-201ENST00000263073 ZNF586Q9NXT0 402 aa10.9□□□□□ -0.66
SMG6-201ENST00000263073 CCDC187A0A096LP49 1063 aa10.9□□□□□ -0.67
SMG6-201ENST00000263073 TCTN1Q2MV58 587 aa10.9□□□□□ -0.67
SMG6-201ENST00000263073 DCAF12Q5T6F0 453 aa10.9□□□□□ -0.67
SMG6-201ENST00000263073 C5orf46Q6UWT4 87 aa10.9□□□□□ -0.67
SMG6-201ENST00000263073 GPR32P1Q8NGA4 272 aa10.9□□□□□ -0.67
SMG6-201ENST00000263073 OR2AE1Q8NHA4 323 aa10.9□□□□□ -0.67
SMG6-201ENST00000263073 ERGIC1Q969X5 290 aa10.9□□□□□ -0.67
SMG6-201ENST00000263073 LYRM4Q9HD34 91 aa10.9□□□□□ -0.67
SMG6-201ENST00000263073 TAF1P21675 1872 aa10.89□□□□□ -0.67
SMG6-201ENST00000263073 A0A1W2PPH5 198 aa10.89□□□□□ -0.67
SMG6-201ENST00000263073 TSPAN12O95859 305 aa10.89□□□□□ -0.67
SMG6-201ENST00000263073 FGF8P55075 233 aaPredicted RBP10.89□□□□□ -0.67
SMG6-201ENST00000263073 TPBGQ13641 420 aa10.89□□□□□ -0.67
SMG6-201ENST00000263073 GUK1Q16774 197 aa10.89□□□□□ -0.67
SMG6-201ENST00000263073 VN1R2Q8NFZ6 395 aa10.89□□□□□ -0.67
SMG6-201ENST00000263073 TRAF4Q9BUZ4 470 aaPredicted RBP10.89□□□□□ -0.67
SMG6-201ENST00000263073 SHROOM3Q8TF72 1996 aa10.89□□□□□ -0.67
SMG6-201ENST00000263073 OR5K3A6NET4 321 aa10.89□□□□□ -0.67
SMG6-201ENST00000263073 ZNF250P15622 560 aa10.89□□□□□ -0.67
SMG6-201ENST00000263073 ADPRHP54922 357 aa10.89□□□□□ -0.67
SMG6-201ENST00000263073 AMER3Q8N944 861 aa10.89□□□□□ -0.67
SMG6-201ENST00000263073 OR4C5Q8NGB2 326 aa10.89□□□□□ -0.67
SMG6-201ENST00000263073 GNPNAT1Q96EK6 184 aaPredicted RBP10.89□□□□□ -0.67
SMG6-201ENST00000263073 DUSP23Q9BVJ7 150 aa10.89□□□□□ -0.67
SMG6-201ENST00000263073 FOXQ1Q9C009 403 aa10.89□□□□□ -0.67
SMG6-201ENST00000263073 KCNIP2Q9NS61 270 aa10.89□□□□□ -0.67
SMG6-201ENST00000263073 CBY1Q9Y3M2 126 aa10.89□□□□□ -0.67
SMG6-201ENST00000263073 A0A1W2PR80 420 aa10.89□□□□□ -0.67
SMG6-201ENST00000263073 DSCR3O14972 297 aa10.89□□□□□ -0.67
SMG6-201ENST00000263073 SIGLEC5O15389 551 aa10.89□□□□□ -0.67
SMG6-201ENST00000263073 EIF1BO60739 113 aaKnown RBP10.89□□□□□ -0.67
SMG6-201ENST00000263073 PIAS2O75928 621 aa10.89□□□□□ -0.67
SMG6-201ENST00000263073 SIGLEC14Q08ET2 396 aa10.89□□□□□ -0.67
SMG6-201ENST00000263073 ZNF66Q6ZN08 573 aa10.89□□□□□ -0.67
SMG6-201ENST00000263073 KTI12Q96EK9 354 aaPredicted RBP10.89□□□□□ -0.67
SMG6-201ENST00000263073 RBM38Q9H0Z9 239 aaKnown RBP10.89□□□□□ -0.67
SMG6-201ENST00000263073 ST3GAL6Q9Y274 331 aa10.89□□□□□ -0.67
SMG6-201ENST00000263073 TMEM272A0A1B0GTI8 110 aa10.89□□□□□ -0.67
SMG6-201ENST00000263073 ARG1P05089 322 aa10.89□□□□□ -0.67
SMG6-201ENST00000263073 B4GALT1P15291 398 aa10.89□□□□□ -0.67
SMG6-201ENST00000263073 TCN2P20062 427 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms