RNA–Protein interactions for RNA: ENST00000262327.9

LIG3-201, Transcript of DNA ligase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIG3, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-201ENST00000262327 VSIG8P0DPA2 414 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 AGTR1P30556 359 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 NPY4RP50391 375 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 SNTB1Q13884 538 aaKnown RBP8.94□□□□□ -0.98
LIG3-201ENST00000262327 ZNF260Q3ZCT1 412 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.94□□□□□ -0.98
LIG3-201ENST00000262327 LYSMD4Q5XG99 296 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 AWAT2Q6E213 333 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 RAB11FIP2Q7L804 512 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 LYG2Q86SG7 212 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 DMRTC2Q8IXT2 367 aaPredicted RBP8.94□□□□□ -0.98
LIG3-201ENST00000262327 ZNF248Q8NDW4 579 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 TMEM104Q8NE00 496 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 OR5D18Q8NGL1 313 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 OR1L3Q8NH93 324 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 THAP6Q8TBB0 222 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 ST7LQ8TDW4 575 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 ELP5Q8TE02 316 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 NPRL2Q8WTW4 380 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 DCUN1D4Q92564 292 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 NECAB3Q96P71 396 aaPredicted RBP8.94□□□□□ -0.98
LIG3-201ENST00000262327 CRB3Q9BUF7 120 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 NKX6-2Q9C056 277 aaPredicted RBP8.94□□□□□ -0.98
LIG3-201ENST00000262327 OR2S2Q9NQN1 319 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 CSAG2Q9Y5P2 127 aa8.94□□□□□ -0.98
LIG3-201ENST00000262327 OR6C76A6NM76 312 aa8.93□□□□□ -0.98
LIG3-201ENST00000262327 SULT2B1O00204 365 aa8.93□□□□□ -0.98
LIG3-201ENST00000262327 SYT7O43581 403 aa8.93□□□□□ -0.98
LIG3-201ENST00000262327 NPIPB7O75200 414 aa8.93□□□□□ -0.98
LIG3-201ENST00000262327 CD8AP01732 235 aa8.93□□□□□ -0.98
LIG3-201ENST00000262327 IFNA6P05013 189 aa8.93□□□□□ -0.98
LIG3-201ENST00000262327 IFNA4P05014 189 aa8.93□□□□□ -0.98
LIG3-201ENST00000262327 S100A9P06702 114 aaKnown RBP8.93□□□□□ -0.98
LIG3-201ENST00000262327 H2AFB1P0C5Y9 115 aa8.93□□□□□ -0.98
LIG3-201ENST00000262327 FOLR1P15328 257 aa8.93□□□□□ -0.98
LIG3-201ENST00000262327 SERPINF1P36955 418 aa8.93□□□□□ -0.98
LIG3-201ENST00000262327 INPP5JQ15735 1006 aaPredicted RBP8.93□□□□□ -0.98
LIG3-201ENST00000262327 PMS2CLQ68D20 193 aa8.93□□□□□ -0.98
LIG3-201ENST00000262327 MOB3CQ70IA8 216 aa8.93□□□□□ -0.98
LIG3-201ENST00000262327 SLC29A4Q7RTT9 530 aa8.93□□□□□ -0.98
LIG3-201ENST00000262327 ANGPTL5Q86XS5 388 aa8.93□□□□□ -0.98
LIG3-201ENST00000262327 CBLN2Q8IUK8 224 aa8.93□□□□□ -0.98
LIG3-201ENST00000262327 INO80EQ8NBZ0 244 aaPredicted RBP8.93□□□□□ -0.98
LIG3-201ENST00000262327 OR1M1Q8NGA1 313 aa8.93□□□□□ -0.98
LIG3-201ENST00000262327 OR51E1Q8TCB6 317 aa8.93□□□□□ -0.98
LIG3-201ENST00000262327 TMED6Q8WW62 240 aa8.93□□□□□ -0.98
LIG3-201ENST00000262327 CPNE2Q96FN4 548 aaPredicted RBP8.93□□□□□ -0.98
LIG3-201ENST00000262327 TSNAXQ99598 290 aaKnown RBP8.93□□□□□ -0.98
LIG3-201ENST00000262327 OR51M1Q9H341 326 aa8.93□□□□□ -0.98
LIG3-201ENST00000262327 SLC17A5Q9NRA2 495 aa8.93□□□□□ -0.98
LIG3-201ENST00000262327 COPS7AQ9UBW8 275 aa8.93□□□□□ -0.98
LIG3-201ENST00000262327 SUSD2Q9UGT4 822 aa8.93□□□□□ -0.98
LIG3-201ENST00000262327 METTL21EPA6NDL7 271 aa8.93□□□□□ -0.98
LIG3-201ENST00000262327 LMO7DNF2Z398 122 aa8.93□□□□□ -0.98
LIG3-201ENST00000262327 SRSF10O75494 262 aaKnown RBP8.93□□□□□ -0.98
LIG3-201ENST00000262327 MPIG6BO95866 241 aa8.93□□□□□ -0.98
LIG3-201ENST00000262327 IGHV2-70P01814 119 aa8.93□□□□□ -0.98
LIG3-201ENST00000262327 CD74P04233 296 aa8.93□□□□□ -0.98
LIG3-201ENST00000262327 GP1BAP07359 652 aa8.93□□□□□ -0.98
LIG3-201ENST00000262327 CSNK1EP49674 416 aaKnown RBP8.93□□□□□ -0.98
LIG3-201ENST00000262327 P2RY4P51582 365 aa8.93□□□□□ -0.98
LIG3-201ENST00000262327 BIDP55957 195 aa8.93□□□□□ -0.98
LIG3-201ENST00000262327 TLE3Q04726 772 aa8.93□□□□□ -0.98
LIG3-201ENST00000262327 TMEM71Q6P5X7 295 aa8.93□□□□□ -0.98
LIG3-201ENST00000262327 OGFOD3Q6PK18 319 aa8.93□□□□□ -0.98
LIG3-201ENST00000262327 ACOT7LQ6ZUV0 252 aa8.93□□□□□ -0.98
LIG3-201ENST00000262327 MAML2Q8IZL2 1156 aaPredicted RBP8.93□□□□□ -0.98
LIG3-201ENST00000262327 ADAMTS18Q8TE60 1221 aa8.93□□□□□ -0.98
LIG3-201ENST00000262327 C11orf40Q8WZ69 217 aa8.93□□□□□ -0.98
LIG3-201ENST00000262327 TMEM41AQ96HV5 264 aa8.93□□□□□ -0.98
LIG3-201ENST00000262327 VN1R1Q9GZP7 353 aa8.93□□□□□ -0.98
LIG3-201ENST00000262327 GAREM1Q9H706 876 aa8.93□□□□□ -0.98
LIG3-201ENST00000262327 A0A1B0GV90 55 aa8.92□□□□□ -0.98
LIG3-201ENST00000262327 TLCD2A6NGC4 264 aa8.92□□□□□ -0.98
LIG3-201ENST00000262327 SULT1C2O00338 296 aa8.92□□□□□ -0.98
LIG3-201ENST00000262327 SDCBPO00560 298 aaPredicted RBP8.92□□□□□ -0.98
LIG3-201ENST00000262327 SOCS1O15524 211 aa8.92□□□□□ -0.98
LIG3-201ENST00000262327 ZNF208O43345 1280 aa8.92□□□□□ -0.98
LIG3-201ENST00000262327 MT-ATP6P00846 226 aa8.92□□□□□ -0.98
LIG3-201ENST00000262327 TTRP02766 147 aa8.92□□□□□ -0.98
LIG3-201ENST00000262327 SMIM6P0DI80 62 aa8.92□□□□□ -0.98
LIG3-201ENST00000262327 RD3LP0DJH9 198 aa8.92□□□□□ -0.98
LIG3-201ENST00000262327 S100PP25815 95 aa8.92□□□□□ -0.98
LIG3-201ENST00000262327 CRABP1P29762 137 aa8.92□□□□□ -0.98
LIG3-201ENST00000262327 FASLGP48023 281 aa8.92□□□□□ -0.98
LIG3-201ENST00000262327 MFAP5Q13361 173 aa8.92□□□□□ -0.98
LIG3-201ENST00000262327 ELAVL1Q15717 326 aaKnown RBP8.92□□□□□ -0.98
LIG3-201ENST00000262327 PLEKHN1Q494U1 663 aaPredicted RBP8.92□□□□□ -0.98
LIG3-201ENST00000262327 ZNF813Q6ZN06 617 aa8.92□□□□□ -0.98
LIG3-201ENST00000262327 GRINAQ7Z429 371 aa8.92□□□□□ -0.98
LIG3-201ENST00000262327 SLC25A42Q86VD7 318 aa8.92□□□□□ -0.98
LIG3-201ENST00000262327 C17orf82Q86X59 251 aaPredicted RBP8.92□□□□□ -0.98
LIG3-201ENST00000262327 ZFP82Q8N141 532 aa8.92□□□□□ -0.98
LIG3-201ENST00000262327 AQP3Q92482 292 aa8.92□□□□□ -0.98
LIG3-201ENST00000262327 RRNAD1Q96FB5 475 aaKnown RBP8.92□□□□□ -0.98
LIG3-201ENST00000262327 FAM71F1Q96KD3 344 aaPredicted RBP8.92□□□□□ -0.98
LIG3-201ENST00000262327 PHB2Q99623 299 aa8.92□□□□□ -0.98
LIG3-201ENST00000262327 WDR77Q9BQA1 342 aaPredicted RBP8.92□□□□□ -0.98
LIG3-201ENST00000262327 EDEM2Q9BV94 578 aa8.92□□□□□ -0.98
LIG3-201ENST00000262327 POLR1DQ9Y2S0 133 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms