RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 NANOGP1Q8N7R0 232 aa23.94■■□□□ 1.42
SMARCD3-201ENST00000262188 WDFY2Q96P53 400 aa23.94■■□□□ 1.42
SMARCD3-201ENST00000262188 OR2H1Q9GZK4 316 aa23.94■■□□□ 1.42
SMARCD3-201ENST00000262188 PLEK2Q9NYT0 353 aa23.94■■□□□ 1.42
SMARCD3-201ENST00000262188 SNAPINO95295 136 aa23.94■■□□□ 1.42
SMARCD3-201ENST00000262188 ECDO95905 644 aaPredicted RBP23.94■■□□□ 1.42
SMARCD3-201ENST00000262188 RAB1AP62820 205 aa23.94■■□□□ 1.42
SMARCD3-201ENST00000262188 PABPC1L2AQ5JQF8 200 aa23.94■■□□□ 1.42
SMARCD3-201ENST00000262188 ZNF684Q5T5D7 378 aa23.94■■□□□ 1.42
SMARCD3-201ENST00000262188 ZNF454Q8N9F8 522 aa23.94■■□□□ 1.42
SMARCD3-201ENST00000262188 OR5T2Q8NGG2 359 aa23.94■■□□□ 1.42
SMARCD3-201ENST00000262188 ST8SIA4Q92187 359 aa23.94■■□□□ 1.42
SMARCD3-201ENST00000262188 MS4A3Q96HJ5 214 aa23.94■■□□□ 1.42
SMARCD3-201ENST00000262188 ACTR6Q9GZN1 396 aa23.94■■□□□ 1.42
SMARCD3-201ENST00000262188 SLC17A5Q9NRA2 495 aa23.94■■□□□ 1.42
SMARCD3-201ENST00000262188 TMEM14AQ9Y6G1 99 aa23.94■■□□□ 1.42
SMARCD3-201ENST00000262188 MYL12BO14950 172 aa23.93■■□□□ 1.42
SMARCD3-201ENST00000262188 LALBAP00709 142 aa23.93■■□□□ 1.42
SMARCD3-201ENST00000262188 PSMB1P20618 241 aaKnown RBP23.93■■□□□ 1.42
SMARCD3-201ENST00000262188 PSMB10P40306 273 aa23.93■■□□□ 1.42
SMARCD3-201ENST00000262188 HIST1H3AP68431 136 aa23.93■■□□□ 1.42
SMARCD3-201ENST00000262188 SLC36A2Q495M3 483 aa23.93■■□□□ 1.42
SMARCD3-201ENST00000262188 HIST2H3PS2Q5TEC6 136 aa23.93■■□□□ 1.42
SMARCD3-201ENST00000262188 HIST2H3AQ71DI3 136 aa23.93■■□□□ 1.42
SMARCD3-201ENST00000262188 MYPOPQ86VE0 399 aaPredicted RBP23.93■■□□□ 1.42
SMARCD3-201ENST00000262188 CPEB3Q8NE35 698 aaKnown RBP23.93■■□□□ 1.42
SMARCD3-201ENST00000262188 ZNF680Q8NEM1 530 aa23.93■■□□□ 1.42
SMARCD3-201ENST00000262188 GJC3Q8NFK1 279 aa23.93■■□□□ 1.42
SMARCD3-201ENST00000262188 ITLN2Q8WWU7 325 aaPredicted RBP23.93■■□□□ 1.42
SMARCD3-201ENST00000262188 ASB5Q8WWX0 329 aa23.93■■□□□ 1.42
SMARCD3-201ENST00000262188 ELOVL3Q9HB03 270 aa23.93■■□□□ 1.42
SMARCD3-201ENST00000262188 LSM2Q9Y333 95 aaKnown RBP23.93■■□□□ 1.42
SMARCD3-201ENST00000262188 E9PI62 339 aa23.92■■□□□ 1.42
SMARCD3-201ENST00000262188 SGCEO43556 437 aa23.92■■□□□ 1.42
SMARCD3-201ENST00000262188 DOK2O60496 412 aa23.92■■□□□ 1.42
SMARCD3-201ENST00000262188 RPP14O95059 124 aaKnown RBP23.92■■□□□ 1.42
SMARCD3-201ENST00000262188 IFNA7P01567 189 aa23.92■■□□□ 1.42
SMARCD3-201ENST00000262188 APOC1P02654 83 aa23.92■■□□□ 1.42
SMARCD3-201ENST00000262188 DBHP09172 617 aa23.92■■□□□ 1.42
SMARCD3-201ENST00000262188 ASCL1P50553 236 aa23.92■■□□□ 1.42
SMARCD3-201ENST00000262188 UBE2NP61088 152 aaKnown RBP23.92■■□□□ 1.42
SMARCD3-201ENST00000262188 SSTP61278 116 aa23.92■■□□□ 1.42
SMARCD3-201ENST00000262188 MED22Q15528 200 aa23.92■■□□□ 1.42
SMARCD3-201ENST00000262188 TBCEQ15813 527 aaPredicted RBP23.92■■□□□ 1.42
SMARCD3-201ENST00000262188 C9orf62Q8N4C0 152 aa23.92■■□□□ 1.42
SMARCD3-201ENST00000262188 RNF133Q8WVZ7 376 aa23.92■■□□□ 1.42
SMARCD3-201ENST00000262188 OR8B4Q96RC9 309 aa23.92■■□□□ 1.42
SMARCD3-201ENST00000262188 INPP5EQ9NRR6 644 aa23.92■■□□□ 1.42
SMARCD3-201ENST00000262188 LRP12Q9Y561 859 aa23.92■■□□□ 1.42
SMARCD3-201ENST00000262188 TIMM10BQ9Y5J6 103 aa23.92■■□□□ 1.42
SMARCD3-201ENST00000262188 AKR7A2O43488 359 aa23.92■■□□□ 1.42
SMARCD3-201ENST00000262188 GMDSO60547 372 aa23.92■■□□□ 1.42
SMARCD3-201ENST00000262188 CELA3BP08861 270 aa23.92■■□□□ 1.42
SMARCD3-201ENST00000262188 RNF224P0DH78 156 aa23.92■■□□□ 1.42
SMARCD3-201ENST00000262188 CCL2P13500 99 aa23.92■■□□□ 1.42
SMARCD3-201ENST00000262188 ANOS1P23352 680 aa23.92■■□□□ 1.42
SMARCD3-201ENST00000262188 SLC25A35Q3KQZ1 300 aa23.92■■□□□ 1.42
SMARCD3-201ENST00000262188 KRT77Q7Z794 578 aa23.92■■□□□ 1.42
SMARCD3-201ENST00000262188 PHC2Q8IXK0 858 aa23.92■■□□□ 1.42
SMARCD3-201ENST00000262188 KLHL36Q8N4N3 616 aa23.92■■□□□ 1.42
SMARCD3-201ENST00000262188 ZFP41Q8N8Y5 198 aa23.92■■□□□ 1.42
SMARCD3-201ENST00000262188 ZNF485Q8NCK3 441 aa23.92■■□□□ 1.42
SMARCD3-201ENST00000262188 C1orf162Q8NEQ5 155 aaPredicted RBP23.92■■□□□ 1.42
SMARCD3-201ENST00000262188 ZC3HAV1LQ96H79 300 aaKnown RBP23.92■■□□□ 1.42
SMARCD3-201ENST00000262188 FLNCQ14315 2725 aa23.92■■□□□ 1.42
SMARCD3-201ENST00000262188 OR5H1A6NKK0 313 aa23.91■■□□□ 1.42
SMARCD3-201ENST00000262188 GSG1Q2KHT4 349 aa23.91■■□□□ 1.42
SMARCD3-201ENST00000262188 TIMM50Q3ZCQ8 353 aa23.91■■□□□ 1.42
SMARCD3-201ENST00000262188 KLBQ86Z14 1044 aa23.91■■□□□ 1.42
SMARCD3-201ENST00000262188 HSD17B8Q92506 261 aa23.91■■□□□ 1.42
SMARCD3-201ENST00000262188 MNTQ99583 582 aa23.91■■□□□ 1.42
SMARCD3-201ENST00000262188 SHARPINQ9H0F6 387 aa23.91■■□□□ 1.42
SMARCD3-201ENST00000262188 C14orf119Q9NWQ9 140 aa23.91■■□□□ 1.42
SMARCD3-201ENST00000262188 ABHD16AO95870 558 aa23.91■■□□□ 1.42
SMARCD3-201ENST00000262188 APEX1P27695 318 aaKnown RBP23.91■■□□□ 1.42
SMARCD3-201ENST00000262188 ELFN2Q5R3F8 820 aa23.91■■□□□ 1.42
SMARCD3-201ENST00000262188 ZNF584Q8IVC4 421 aa23.91■■□□□ 1.42
SMARCD3-201ENST00000262188 MND1Q9BWT6 205 aa23.91■■□□□ 1.42
SMARCD3-201ENST00000262188 ELOVL5Q9NYP7 299 aa23.91■■□□□ 1.42
SMARCD3-201ENST00000262188 C16orf97H3BN30 126 aa23.9■■□□□ 1.42
SMARCD3-201ENST00000262188 HSMCR30P0CW71 290 aa23.9■■□□□ 1.42
SMARCD3-201ENST00000262188 HOXC12P31275 282 aa23.9■■□□□ 1.42
SMARCD3-201ENST00000262188 RSPO1Q2MKA7 263 aaPredicted RBP23.9■■□□□ 1.42
SMARCD3-201ENST00000262188 MTFR2Q6P444 385 aa23.9■■□□□ 1.42
SMARCD3-201ENST00000262188 ASB17Q8WXJ9 295 aa23.9■■□□□ 1.42
SMARCD3-201ENST00000262188 RBPMSQ93062 196 aaKnown RBP23.9■■□□□ 1.42
SMARCD3-201ENST00000262188 PELI1Q96FA3 418 aa23.9■■□□□ 1.42
SMARCD3-201ENST00000262188 TMEM129A0AVI4 362 aa23.89■■□□□ 1.42
SMARCD3-201ENST00000262188 SYNGR3O43761 229 aa23.89■■□□□ 1.42
SMARCD3-201ENST00000262188 H2BFMP0C1H6 154 aa23.89■■□□□ 1.42
SMARCD3-201ENST00000262188 PRKXP51817 358 aa23.89■■□□□ 1.42
SMARCD3-201ENST00000262188 PCBD1P61457 104 aa23.89■■□□□ 1.42
SMARCD3-201ENST00000262188 MRPL28Q13084 256 aaKnown RBP23.89■■□□□ 1.42
SMARCD3-201ENST00000262188 RNLSQ5VYX0 342 aa23.89■■□□□ 1.42
SMARCD3-201ENST00000262188 NAA40Q86UY6 237 aa23.89■■□□□ 1.42
SMARCD3-201ENST00000262188 ZNF679Q8IYX0 411 aa23.89■■□□□ 1.42
SMARCD3-201ENST00000262188 RNF166Q96A37 237 aaPredicted RBP23.89■■□□□ 1.42
SMARCD3-201ENST00000262188 BRD7Q9NPI1 651 aa23.89■■□□□ 1.42
SMARCD3-201ENST00000262188 ZNF878C9JN71 531 aa23.89■■□□□ 1.41
SMARCD3-201ENST00000262188 UBL3O95164 117 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms