RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 MYF5P13349 255 aa17.17■□□□□ 0.34
SCARB1-201ENST00000261693 TPT1P13693 172 aaKnown RBP17.17■□□□□ 0.34
SCARB1-201ENST00000261693 CDAP32320 146 aa17.17■□□□□ 0.34
SCARB1-201ENST00000261693 OR3A4PP47883 348 aa17.17■□□□□ 0.34
SCARB1-201ENST00000261693 RNF4P78317 190 aa17.17■□□□□ 0.34
SCARB1-201ENST00000261693 AIMP2Q13155 320 aaKnown RBP17.17■□□□□ 0.34
SCARB1-201ENST00000261693 NKAPLQ5M9Q1 402 aa17.17■□□□□ 0.34
SCARB1-201ENST00000261693 DTWD2Q8NBA8 298 aa17.17■□□□□ 0.34
SCARB1-201ENST00000261693 RAB19A4D1S5 217 aa17.16■□□□□ 0.34
SCARB1-201ENST00000261693 MSGN1A6NI15 193 aa17.16■□□□□ 0.34
SCARB1-201ENST00000261693 FOXF1Q12946 379 aa17.16■□□□□ 0.34
SCARB1-201ENST00000261693 HAGHLQ6PII5 290 aaPredicted RBP17.16■□□□□ 0.34
SCARB1-201ENST00000261693 ABHD12BQ7Z5M8 362 aaPredicted RBP17.16■□□□□ 0.34
SCARB1-201ENST00000261693 BAP18Q8IXM2 172 aa17.16■□□□□ 0.34
SCARB1-201ENST00000261693 LINC00518Q8N0U6 118 aa17.16■□□□□ 0.34
SCARB1-201ENST00000261693 SVBPQ8N300 66 aa17.16■□□□□ 0.34
SCARB1-201ENST00000261693 TERB2Q8NHR7 220 aa17.16■□□□□ 0.34
SCARB1-201ENST00000261693 MFSD8Q8NHS3 518 aa17.16■□□□□ 0.34
SCARB1-201ENST00000261693 LPAR5Q9H1C0 372 aa17.16■□□□□ 0.34
SCARB1-201ENST00000261693 C5orf66Q9H5L9 145 aa17.16■□□□□ 0.34
SCARB1-201ENST00000261693 POLR1DQ9Y2S0 133 aa17.16■□□□□ 0.34
SCARB1-201ENST00000261693 TEX13DA0A0J9YY54 714 aaPredicted RBP17.16■□□□□ 0.34
SCARB1-201ENST00000261693 TMEM14DPA8MWL7 114 aa17.16■□□□□ 0.34
SCARB1-201ENST00000261693 F8W036 122 aa17.16■□□□□ 0.34
SCARB1-201ENST00000261693 CD38P28907 300 aa17.16■□□□□ 0.34
SCARB1-201ENST00000261693 BLOC1S1P78537 153 aa17.16■□□□□ 0.34
SCARB1-201ENST00000261693 FOXK1P85037 733 aa17.16■□□□□ 0.34
SCARB1-201ENST00000261693 SGCAQ16586 387 aa17.16■□□□□ 0.34
SCARB1-201ENST00000261693 TMEM200AQ86VY9 491 aa17.16■□□□□ 0.34
SCARB1-201ENST00000261693 MVB12AQ96EY5 273 aa17.16■□□□□ 0.34
SCARB1-201ENST00000261693 MRPS28Q9Y2Q9 187 aaKnown RBP17.16■□□□□ 0.34
SCARB1-201ENST00000261693 PRELID3BQ9Y3B1 194 aa17.16■□□□□ 0.34
SCARB1-201ENST00000261693 FGF16O43320 207 aa17.15■□□□□ 0.34
SCARB1-201ENST00000261693 CFHR1Q03591 330 aa17.15■□□□□ 0.34
SCARB1-201ENST00000261693 ZP4Q12836 540 aa17.15■□□□□ 0.34
SCARB1-201ENST00000261693 CCDC157Q569K6 752 aa17.15■□□□□ 0.34
SCARB1-201ENST00000261693 OR5T2Q8NGG2 359 aa17.15■□□□□ 0.34
SCARB1-201ENST00000261693 TMEM230Q96A57 120 aa17.15■□□□□ 0.34
SCARB1-201ENST00000261693 RAB3CQ96E17 227 aa17.15■□□□□ 0.34
SCARB1-201ENST00000261693 H7C2Y5 167 aa17.15■□□□□ 0.34
SCARB1-201ENST00000261693 RAD51DO75771 328 aa17.15■□□□□ 0.34
SCARB1-201ENST00000261693 FLI1Q01543 452 aaPredicted RBP17.15■□□□□ 0.34
SCARB1-201ENST00000261693 MFAP5Q13361 173 aa17.15■□□□□ 0.34
SCARB1-201ENST00000261693 TMEM128Q5BJH2 165 aa17.15■□□□□ 0.34
SCARB1-201ENST00000261693 CARD17Q5XLA6 110 aa17.15■□□□□ 0.34
SCARB1-201ENST00000261693 C5orf46Q6UWT4 87 aa17.15■□□□□ 0.34
SCARB1-201ENST00000261693 FAM71F1Q96KD3 344 aaPredicted RBP17.15■□□□□ 0.34
SCARB1-201ENST00000261693 TLNRD1Q9H1K6 362 aa17.15■□□□□ 0.34
SCARB1-201ENST00000261693 OR2S2Q9NQN1 319 aa17.15■□□□□ 0.34
SCARB1-201ENST00000261693 CYTL1Q9NRR1 136 aa17.15■□□□□ 0.34
SCARB1-201ENST00000261693 OR5AC2Q9NZP5 309 aa17.15■□□□□ 0.34
SCARB1-201ENST00000261693 ANKUB1A6NFN9 424 aa17.14■□□□□ 0.33
SCARB1-201ENST00000261693 F8VVB4 439 aa17.14■□□□□ 0.33
SCARB1-201ENST00000261693 F8VWA3 439 aa17.14■□□□□ 0.33
SCARB1-201ENST00000261693 SCRN3Q0VDG4 424 aa17.14■□□□□ 0.33
SCARB1-201ENST00000261693 CLEC18BQ6UXF7 455 aa17.14■□□□□ 0.33
SCARB1-201ENST00000261693 STOML3Q8TAV4 291 aa17.14■□□□□ 0.33
SCARB1-201ENST00000261693 NMES1Q9C002 83 aa17.14■□□□□ 0.33
SCARB1-201ENST00000261693 TREM1Q9NP99 234 aa17.14■□□□□ 0.33
SCARB1-201ENST00000261693 SERINC1Q9NRX5 453 aa17.14■□□□□ 0.33
SCARB1-201ENST00000261693 ZNF629Q9UEG4 869 aaPredicted RBP17.14■□□□□ 0.33
SCARB1-201ENST00000261693 HTR3BO95264 441 aa17.14■□□□□ 0.33
SCARB1-201ENST00000261693 GIMD1P0DJR0 217 aa17.14■□□□□ 0.33
SCARB1-201ENST00000261693 C14orf28Q4W4Y0 310 aa17.14■□□□□ 0.33
SCARB1-201ENST00000261693 MAFIPQ8WZ33 124 aa17.14■□□□□ 0.33
SCARB1-201ENST00000261693 ZNF319Q9P2F9 582 aa17.14■□□□□ 0.33
SCARB1-201ENST00000261693 MLXQ9UH92 298 aa17.14■□□□□ 0.33
SCARB1-201ENST00000261693 LHFPL6Q9Y693 200 aa17.14■□□□□ 0.33
SCARB1-201ENST00000261693 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.13■□□□□ 0.33
SCARB1-201ENST00000261693 EFNA2O43921 213 aa17.13■□□□□ 0.33
SCARB1-201ENST00000261693 CDC14BO60729 498 aa17.13■□□□□ 0.33
SCARB1-201ENST00000261693 HCKP08631 526 aa17.13■□□□□ 0.33
SCARB1-201ENST00000261693 LAP3P28838 519 aa17.13■□□□□ 0.33
SCARB1-201ENST00000261693 SLC30A7Q8NEW0 376 aa17.13■□□□□ 0.33
SCARB1-201ENST00000261693 OR4A4PQ8NGN8 299 aa17.13■□□□□ 0.33
SCARB1-201ENST00000261693 RNF141Q8WVD5 230 aa17.13■□□□□ 0.33
SCARB1-201ENST00000261693 DDIT4LQ96D03 193 aa17.13■□□□□ 0.33
SCARB1-201ENST00000261693 ARHGAP5-AS1Q96IT6 56 aa17.13■□□□□ 0.33
SCARB1-201ENST00000261693 LIPT2A6NK58 231 aa17.13■□□□□ 0.33
SCARB1-201ENST00000261693 SDCBPO00560 298 aaPredicted RBP17.13■□□□□ 0.33
SCARB1-201ENST00000261693 CRTAPO75718 401 aaPredicted RBP17.13■□□□□ 0.33
SCARB1-201ENST00000261693 CD79AP11912 226 aa17.13■□□□□ 0.33
SCARB1-201ENST00000261693 GLULP15104 373 aa17.13■□□□□ 0.33
SCARB1-201ENST00000261693 TBPP20226 339 aa17.13■□□□□ 0.33
SCARB1-201ENST00000261693 APOBEC1P41238 236 aaKnown RBP17.13■□□□□ 0.33
SCARB1-201ENST00000261693 CX3CR1P49238 355 aa17.13■□□□□ 0.33
SCARB1-201ENST00000261693 AKR1D1P51857 326 aa17.13■□□□□ 0.33
SCARB1-201ENST00000261693 TMEM50BP56557 158 aa17.13■□□□□ 0.33
SCARB1-201ENST00000261693 TAS2R31P59538 309 aa17.13■□□□□ 0.33
SCARB1-201ENST00000261693 C17orf67Q0P5P2 114 aa17.13■□□□□ 0.33
SCARB1-201ENST00000261693 H3F3CQ6NXT2 135 aa17.13■□□□□ 0.33
SCARB1-201ENST00000261693 ZNF529Q6P280 563 aa17.13■□□□□ 0.33
SCARB1-201ENST00000261693 ZNF585AQ6P3V2 769 aa17.13■□□□□ 0.33
SCARB1-201ENST00000261693 OR5AS1Q8N127 324 aa17.13■□□□□ 0.33
SCARB1-201ENST00000261693 ST8SIA1Q92185 356 aa17.13■□□□□ 0.33
SCARB1-201ENST00000261693 ARL11Q969Q4 196 aa17.13■□□□□ 0.33
SCARB1-201ENST00000261693 ST6GALNAC5Q9BVH7 336 aa17.13■□□□□ 0.33
SCARB1-201ENST00000261693 CHRNA10Q9GZZ6 450 aa17.13■□□□□ 0.33
SCARB1-201ENST00000261693 GPR84Q9NQS5 396 aa17.13■□□□□ 0.33
SCARB1-201ENST00000261693 B3GAT1Q9P2W7 334 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms