RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 UGT2B10P36537 528 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 GPX4P36969 197 aaPredicted RBP3.12□□□□□ -1.91
CCDC54-201ENST00000261058 GPR1P46091 355 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 DNASE1L1P49184 302 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 STX4Q12846 297 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 AQP6Q13520 282 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 VGLL4Q14135 290 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 POU6F1Q14863 301 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 ARL6IP1Q15041 203 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 SLC36A2Q495M3 483 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 COX19Q49B96 90 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 TP53I3Q53FA7 332 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 TPRG1LQ5T0D9 272 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 OR52E8Q6IFG1 317 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 APOBEC3HQ6NTF7 200 aaKnown RBP3.12□□□□□ -1.91
CCDC54-201ENST00000261058 ZNF544Q6NX49 715 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 GDPD3Q7L5L3 318 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 OR2W3Q7Z3T1 314 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 SH2D6Q7Z4S9 175 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 NT5DC3Q86UY8 548 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 RALGPS2Q86X27 583 aaPredicted RBP3.12□□□□□ -1.91
CCDC54-201ENST00000261058 SKA3Q8IX90 412 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 C11orf53Q8IXP5 236 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 FAM71AQ8IYT1 594 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 CXorf40AQ8TE69 158 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 HGDQ93099 445 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 ISOC2Q96AB3 205 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 FGGYQ96C11 551 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 RNF170Q96K19 258 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 ZFP3Q96NJ6 502 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 CLCC1Q96S66 551 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 TCEAL7Q9BRU2 100 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 NICN1Q9BSH3 213 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 RSG1Q9BU20 258 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 ZNF426Q9BUY5 554 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 DDA1Q9BW61 102 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 NEUROG2Q9H2A3 272 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 PPA2Q9H2U2 334 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 WDR55Q9H6Y2 383 aaPredicted RBP3.12□□□□□ -1.91
CCDC54-201ENST00000261058 NHEJ1Q9H9Q4 299 aaPredicted RBP3.12□□□□□ -1.91
CCDC54-201ENST00000261058 ABCB9Q9NP78 766 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 FBXO8Q9NRD0 319 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 DDX19AQ9NUU7 478 aaKnown RBP3.12□□□□□ -1.91
CCDC54-201ENST00000261058 BFARQ9NZS9 450 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 VAPAQ9P0L0 249 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 OPN4Q9UHM6 478 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 GLS2Q9UI32 602 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 NXT1Q9UKK6 140 aaKnown RBP3.12□□□□□ -1.91
CCDC54-201ENST00000261058 NDRG2Q9UN36 371 aaKnown RBP3.12□□□□□ -1.91
CCDC54-201ENST00000261058 PSG11Q9UQ72 335 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 TP53TG5Q9Y2B4 290 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 ZNF337Q9Y3M9 751 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 ASB4Q9Y574 426 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 KIAA0232Q92628 1395 aa3.12□□□□□ -1.91
CCDC54-201ENST00000261058 IGHV7-81A0A0B4J1V7 117 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 IGHV2-70DA0A0C4DH43 119 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 A0A1B0GV90 55 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 SMIM31A0A1B0GVY4 71 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 A0A1B0GWB2 263 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 SLC22A20A6NK97 555 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 LOC110117498-PIK3R3F6TDL0 507 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 SMLR1H3BR10 107 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 CCRL2O00421 344 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 PRKYO43930 277 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 SLC19A2O60779 497 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 CCDC22O60826 627 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 SRP72O76094 671 aaKnown RBP3.11□□□□□ -1.91
CCDC54-201ENST00000261058 ATP6V1G2O95670 118 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 TSPAN13O95857 204 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 CA1P00915 261 aaPredicted RBP3.11□□□□□ -1.91
CCDC54-201ENST00000261058 IFNA10P01566 189 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 PPBPP02775 128 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 CDK1P06493 297 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 TACSTD2P09758 323 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 NBEAP1P0C6P0 100 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 HLA-DMAP28067 261 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 GCAP28676 217 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 ARR3P36575 388 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 BTDP43251 543 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 QARSP47897 775 aaKnown RBP3.11□□□□□ -1.91
CCDC54-201ENST00000261058 MLF1P58340 268 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 LYZP61626 148 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 RBX1P62877 108 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 CCL7P80098 99 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 MRPS22P82650 360 aaKnown RBP3.11□□□□□ -1.91
CCDC54-201ENST00000261058 PSG5Q15238 335 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 TMEM249Q2WGJ8 235 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 SAMD4BQ5PRF9 694 aaKnown RBP3.11□□□□□ -1.91
CCDC54-201ENST00000261058 OR2G6Q5TZ20 316 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 RESP18Q5W5W9 173 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 CYHR1Q6ZMK1 362 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 ZNF621Q6ZSS3 439 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 FAM92BQ6ZTR7 304 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 LINC00336Q6ZUF6 198 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 ZFP82Q8N141 532 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 MTURNQ8N3F0 131 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 STX19Q8N4C7 294 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 CDRT4Q8N9R6 151 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 ZNF738Q8NE65 137 aa3.11□□□□□ -1.91
CCDC54-201ENST00000261058 CA5BP1Q8WTZ4 195 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms