RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 BCL2L14Q9BZR8 327 aa17.83■□□□□ 0.45
RTCA-201ENST00000260563 FAM192AQ9GZU8 254 aa17.83■□□□□ 0.45
RTCA-201ENST00000260563 ICMTO60725 284 aa17.82■□□□□ 0.44
RTCA-201ENST00000260563 NOL3O60936 208 aaKnown RBP17.82■□□□□ 0.44
RTCA-201ENST00000260563 TTRP02766 147 aa17.82■□□□□ 0.44
RTCA-201ENST00000260563 HLA-DPB1P04440 258 aa17.82■□□□□ 0.44
RTCA-201ENST00000260563 RAD52P43351 418 aa17.82■□□□□ 0.44
RTCA-201ENST00000260563 RPS23P62266 143 aaKnown RBP17.82■□□□□ 0.44
RTCA-201ENST00000260563 ZNF101Q8IZC7 436 aa17.82■□□□□ 0.44
RTCA-201ENST00000260563 OR8B12Q8NGG6 310 aa17.82■□□□□ 0.44
RTCA-201ENST00000260563 LILRB1Q8NHL6 650 aaPredicted RBP17.82■□□□□ 0.44
RTCA-201ENST00000260563 RAB2BQ8WUD1 216 aa17.82■□□□□ 0.44
RTCA-201ENST00000260563 RPL3LQ92901 407 aaKnown RBP17.82■□□□□ 0.44
RTCA-201ENST00000260563 FBXW5Q969U6 566 aa17.82■□□□□ 0.44
RTCA-201ENST00000260563 ISOC1Q96CN7 298 aa17.82■□□□□ 0.44
RTCA-201ENST00000260563 PGAM5Q96HS1 289 aa17.82■□□□□ 0.44
RTCA-201ENST00000260563 CHCHD6Q9BRQ6 235 aa17.82■□□□□ 0.44
RTCA-201ENST00000260563 SP140LQ9H930 580 aa17.82■□□□□ 0.44
RTCA-201ENST00000260563 UBTD1Q9HAC8 227 aa17.82■□□□□ 0.44
RTCA-201ENST00000260563 CA10Q9NS85 328 aa17.82■□□□□ 0.44
RTCA-201ENST00000260563 CISD1Q9NZ45 108 aaKnown RBP17.82■□□□□ 0.44
RTCA-201ENST00000260563 RSL24D1Q9UHA3 163 aaKnown RBP17.82■□□□□ 0.44
RTCA-201ENST00000260563 CELSR2Q9HCU4 2923 aa17.82■□□□□ 0.44
RTCA-201ENST00000260563 HS3ST1O14792 307 aa17.82■□□□□ 0.44
RTCA-201ENST00000260563 GPX5O75715 221 aa17.82■□□□□ 0.44
RTCA-201ENST00000260563 SERPINA3P01011 423 aa17.82■□□□□ 0.44
RTCA-201ENST00000260563 ISG15P05161 165 aa17.82■□□□□ 0.44
RTCA-201ENST00000260563 UBCP0CG48 685 aaKnown RBP17.82■□□□□ 0.44
RTCA-201ENST00000260563 UCP2P55851 309 aa17.82■□□□□ 0.44
RTCA-201ENST00000260563 RPS11P62280 158 aaKnown RBP eCLIP17.82■□□□□ 0.44
RTCA-201ENST00000260563 NKX6-1P78426 367 aaPredicted RBP17.82■□□□□ 0.44
RTCA-201ENST00000260563 FABP5Q01469 135 aa17.82■□□□□ 0.44
RTCA-201ENST00000260563 CD200R1LQ6Q8B3 271 aa17.82■□□□□ 0.44
RTCA-201ENST00000260563 VHLLQ6RSH7 139 aa17.82■□□□□ 0.44
RTCA-201ENST00000260563 RDH10Q8IZV5 341 aa17.82■□□□□ 0.44
RTCA-201ENST00000260563 OR13C5Q8NGS8 318 aa17.82■□□□□ 0.44
RTCA-201ENST00000260563 ABHD4Q8TB40 342 aa17.82■□□□□ 0.44
RTCA-201ENST00000260563 RGP1Q92546 391 aaPredicted RBP17.82■□□□□ 0.44
RTCA-201ENST00000260563 ZNF319Q9P2F9 582 aa17.82■□□□□ 0.44
RTCA-201ENST00000260563 SSR3Q9UNL2 185 aa17.82■□□□□ 0.44
RTCA-201ENST00000260563 ROS1P08922 2347 aa17.81■□□□□ 0.44
RTCA-201ENST00000260563 LOC100506127A0A0U1RQW1 187 aa17.81■□□□□ 0.44
RTCA-201ENST00000260563 TRDV1A0A1B0GX56 115 aa17.81■□□□□ 0.44
RTCA-201ENST00000260563 E7EQL1 145 aa17.81■□□□□ 0.44
RTCA-201ENST00000260563 RGS9O75916 674 aaPredicted RBP17.81■□□□□ 0.44
RTCA-201ENST00000260563 LCATP04180 440 aa17.81■□□□□ 0.44
RTCA-201ENST00000260563 PRF1P14222 555 aa17.81■□□□□ 0.44
RTCA-201ENST00000260563 ANOS1P23352 680 aa17.81■□□□□ 0.44
RTCA-201ENST00000260563 GLRXP35754 106 aa17.81■□□□□ 0.44
RTCA-201ENST00000260563 CTF1Q16619 201 aa17.81■□□□□ 0.44
RTCA-201ENST00000260563 TMEM244Q5VVB8 128 aa17.81■□□□□ 0.44
RTCA-201ENST00000260563 GDPGP1Q6ZNW5 385 aa17.81■□□□□ 0.44
RTCA-201ENST00000260563 RFPL4BQ6ZWI9 263 aa17.81■□□□□ 0.44
RTCA-201ENST00000260563 OR52H1Q8NGJ2 320 aa17.81■□□□□ 0.44
RTCA-201ENST00000260563 DGCR14Q96DF8 476 aaKnown RBP17.81■□□□□ 0.44
RTCA-201ENST00000260563 BCL7BQ9BQE9 202 aa17.81■□□□□ 0.44
RTCA-201ENST00000260563 ZNF442Q9H7R0 627 aa17.81■□□□□ 0.44
RTCA-201ENST00000260563 EXOSC4Q9NPD3 245 aaKnown RBP17.81■□□□□ 0.44
RTCA-201ENST00000260563 TBCCD1Q9NVR7 557 aa17.81■□□□□ 0.44
RTCA-201ENST00000260563 J3QW42 95 aa17.8■□□□□ 0.44
RTCA-201ENST00000260563 P2RY10O00398 339 aa17.8■□□□□ 0.44
RTCA-201ENST00000260563 GABRPO00591 440 aa17.8■□□□□ 0.44
RTCA-201ENST00000260563 TBX1O43435 398 aa17.8■□□□□ 0.44
RTCA-201ENST00000260563 GALP22466 123 aa17.8■□□□□ 0.44
RTCA-201ENST00000260563 LSM3P62310 102 aaKnown RBP17.8■□□□□ 0.44
RTCA-201ENST00000260563 SNAI3Q3KNW1 292 aa17.8■□□□□ 0.44
RTCA-201ENST00000260563 TMEM91Q6ZNR0 172 aa17.8■□□□□ 0.44
RTCA-201ENST00000260563 C1orf174Q8IYL3 243 aa17.8■□□□□ 0.44
RTCA-201ENST00000260563 OR1J1Q8NGS3 322 aa17.8■□□□□ 0.44
RTCA-201ENST00000260563 APOBEC3DQ96AK3 386 aaPredicted RBP17.8■□□□□ 0.44
RTCA-201ENST00000260563 TRMT61AQ96FX7 289 aaKnown RBP17.8■□□□□ 0.44
RTCA-201ENST00000260563 DHRS9Q9BPW9 319 aa17.8■□□□□ 0.44
RTCA-201ENST00000260563 C1QTNF5Q9BXJ0 243 aa17.8■□□□□ 0.44
RTCA-201ENST00000260563 OR10A2Q9H208 303 aa17.8■□□□□ 0.44
RTCA-201ENST00000260563 PLEKHF2Q9H8W4 249 aa17.8■□□□□ 0.44
RTCA-201ENST00000260563 CENPEQ02224 2701 aa17.8■□□□□ 0.44
RTCA-201ENST00000260563 DSCAMO60469 2012 aa17.79■□□□□ 0.44
RTCA-201ENST00000260563 C5orf63A6NC05 138 aa17.79■□□□□ 0.44
RTCA-201ENST00000260563 ZNF701M0R085 212 aaPredicted RBP17.79■□□□□ 0.44
RTCA-201ENST00000260563 SC5DO75845 299 aa17.79■□□□□ 0.44
RTCA-201ENST00000260563 ACHEP22303 614 aa17.79■□□□□ 0.44
RTCA-201ENST00000260563 INSL4Q14641 139 aa17.79■□□□□ 0.44
RTCA-201ENST00000260563 ACSM3Q53FZ2 586 aa17.79■□□□□ 0.44
RTCA-201ENST00000260563 RGS7BPQ6MZT1 257 aaPredicted RBP17.79■□□□□ 0.44
RTCA-201ENST00000260563 COLCA1Q6ZS62 124 aa17.79■□□□□ 0.44
RTCA-201ENST00000260563 OR51E1Q8TCB6 317 aa17.79■□□□□ 0.44
RTCA-201ENST00000260563 GPR148Q8TDV2 347 aa17.79■□□□□ 0.44
RTCA-201ENST00000260563 CENPOQ9BU64 300 aa17.79■□□□□ 0.44
RTCA-201ENST00000260563 FAIMQ9NVQ4 179 aa17.79■□□□□ 0.44
RTCA-201ENST00000260563 A0A0U1RQV5 110 aa17.78■□□□□ 0.44
RTCA-201ENST00000260563 LOC107986453A0A1B0GWG9 222 aa17.78■□□□□ 0.44
RTCA-201ENST00000260563 H3BMQ9 156 aa17.78■□□□□ 0.44
RTCA-201ENST00000260563 H3BSH0 61 aa17.78■□□□□ 0.44
RTCA-201ENST00000260563 NGFP01138 241 aa17.78■□□□□ 0.44
RTCA-201ENST00000260563 FGF9P31371 208 aaPredicted RBP17.78■□□□□ 0.44
RTCA-201ENST00000260563 THBS4P35443 961 aa17.78■□□□□ 0.44
RTCA-201ENST00000260563 FABP6P51161 128 aa17.78■□□□□ 0.44
RTCA-201ENST00000260563 ERVS71-1P61550 626 aa17.78■□□□□ 0.44
RTCA-201ENST00000260563 PPP1CBP62140 327 aa17.78■□□□□ 0.44
RTCA-201ENST00000260563 OR10AC1Q8NH08 325 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms