RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 TMEM104Q8NE00 496 aa13.5□□□□□ -0.25
DDX56-201ENST00000258772 NOXO1Q8NFA2 376 aa13.5□□□□□ -0.25
DDX56-201ENST00000258772 OR2I1PQ8NGU4 316 aa13.5□□□□□ -0.25
DDX56-201ENST00000258772 MARCH1Q8TCQ1 289 aa13.5□□□□□ -0.25
DDX56-201ENST00000258772 WDR77Q9BQA1 342 aaPredicted RBP13.5□□□□□ -0.25
DDX56-201ENST00000258772 GAREM1Q9H706 876 aa13.5□□□□□ -0.25
DDX56-201ENST00000258772 MOB1AQ9H8S9 216 aa13.5□□□□□ -0.25
DDX56-201ENST00000258772 MED12Q93074 2177 aa13.5□□□□□ -0.25
DDX56-201ENST00000258772 NUPL2O15504 423 aaKnown RBP13.49□□□□□ -0.25
DDX56-201ENST00000258772 SLC2A1P11166 492 aa13.49□□□□□ -0.25
DDX56-201ENST00000258772 INPP5JQ15735 1006 aaPredicted RBP13.49□□□□□ -0.25
DDX56-201ENST00000258772 PAN3Q58A45 887 aaKnown RBP13.49□□□□□ -0.25
DDX56-201ENST00000258772 ATRAIDQ6UW56 229 aa13.49□□□□□ -0.25
DDX56-201ENST00000258772 ABHD12BQ7Z5M8 362 aaPredicted RBP13.49□□□□□ -0.25
DDX56-201ENST00000258772 HOGA1Q86XE5 327 aa13.49□□□□□ -0.25
DDX56-201ENST00000258772 OR8B12Q8NGG6 310 aa13.49□□□□□ -0.25
DDX56-201ENST00000258772 OR5L2Q8NGL0 311 aa13.49□□□□□ -0.25
DDX56-201ENST00000258772 FBXW5Q969U6 566 aa13.49□□□□□ -0.25
DDX56-201ENST00000258772 C1orf147Q96MC9 270 aaPredicted RBP13.49□□□□□ -0.25
DDX56-201ENST00000258772 ZNF319Q9P2F9 582 aa13.49□□□□□ -0.25
DDX56-201ENST00000258772 MBD2Q9UBB5 411 aa13.49□□□□□ -0.25
DDX56-201ENST00000258772 MRPS28Q9Y2Q9 187 aaKnown RBP13.49□□□□□ -0.25
DDX56-201ENST00000258772 NCOA6Q14686 2063 aaPredicted RBP13.49□□□□□ -0.25
DDX56-201ENST00000258772 A0A1W2PNR3 127 aa13.48□□□□□ -0.25
DDX56-201ENST00000258772 SOCS1O15524 211 aa13.48□□□□□ -0.25
DDX56-201ENST00000258772 TRAF3IP2O43734 574 aaPredicted RBP13.48□□□□□ -0.25
DDX56-201ENST00000258772 TIAF1O95411 115 aa13.48□□□□□ -0.25
DDX56-201ENST00000258772 MPIG6BO95866 241 aa13.48□□□□□ -0.25
DDX56-201ENST00000258772 ZNF121P58317 390 aaPredicted RBP13.48□□□□□ -0.25
DDX56-201ENST00000258772 GABREP78334 506 aa13.48□□□□□ -0.25
DDX56-201ENST00000258772 SNTB1Q13884 538 aaKnown RBP13.48□□□□□ -0.25
DDX56-201ENST00000258772 PLAC9Q5JTB6 97 aa13.48□□□□□ -0.25
DDX56-201ENST00000258772 FAM69BQ5VUD6 431 aa13.48□□□□□ -0.25
DDX56-201ENST00000258772 SLC25A47Q6Q0C1 308 aa13.48□□□□□ -0.25
DDX56-201ENST00000258772 ZNF574Q6ZN55 896 aaPredicted RBP13.48□□□□□ -0.25
DDX56-201ENST00000258772 COMMD2Q86X83 199 aa13.48□□□□□ -0.25
DDX56-201ENST00000258772 ADPRHL1Q8NDY3 354 aa13.48□□□□□ -0.25
DDX56-201ENST00000258772 OR10G3Q8NGC4 313 aa13.48□□□□□ -0.25
DDX56-201ENST00000258772 TERB2Q8NHR7 220 aa13.48□□□□□ -0.25
DDX56-201ENST00000258772 KCNG3Q8TAE7 436 aa13.48□□□□□ -0.25
DDX56-201ENST00000258772 ELP5Q8TE02 316 aa13.48□□□□□ -0.25
DDX56-201ENST00000258772 TMEM41AQ96HV5 264 aa13.48□□□□□ -0.25
DDX56-201ENST00000258772 ASH2LQ9UBL3 628 aa13.48□□□□□ -0.25
DDX56-201ENST00000258772 PRELID1Q9Y255 219 aa13.48□□□□□ -0.25
DDX56-201ENST00000258772 IGLV3-32A0A0A0MS00 114 aa13.48□□□□□ -0.25
DDX56-201ENST00000258772 F5H0A9 414 aaPredicted RBP13.48□□□□□ -0.25
DDX56-201ENST00000258772 GP1BAP07359 652 aa13.48□□□□□ -0.25
DDX56-201ENST00000258772 GSTP1P09211 210 aaKnown RBP13.48□□□□□ -0.25
DDX56-201ENST00000258772 ZNF17P17021 662 aa13.48□□□□□ -0.25
DDX56-201ENST00000258772 MICBQ29980 383 aa13.48□□□□□ -0.25
DDX56-201ENST00000258772 CARD17Q5XLA6 110 aa13.48□□□□□ -0.25
DDX56-201ENST00000258772 TMEM71Q6P5X7 295 aa13.48□□□□□ -0.25
DDX56-201ENST00000258772 PGAP1Q75T13 922 aa13.48□□□□□ -0.25
DDX56-201ENST00000258772 OR52H1Q8NGJ2 320 aa13.48□□□□□ -0.25
DDX56-201ENST00000258772 RAB3CQ96E17 227 aa13.48□□□□□ -0.25
DDX56-201ENST00000258772 METTL7AQ9H8H3 244 aa13.48□□□□□ -0.25
DDX56-201ENST00000258772 GPR84Q9NQS5 396 aa13.48□□□□□ -0.25
DDX56-201ENST00000258772 WIF1Q9Y5W5 379 aa13.48□□□□□ -0.25
DDX56-201ENST00000258772 RTTNQ86VV8 2226 aa13.48□□□□□ -0.25
DDX56-201ENST00000258772 C5orf51A6NDU8 294 aa13.47□□□□□ -0.25
DDX56-201ENST00000258772 ZNF814B7Z6K7 855 aa13.47□□□□□ -0.25
DDX56-201ENST00000258772 RER1O15258 196 aa13.47□□□□□ -0.25
DDX56-201ENST00000258772 BCAT2O15382 392 aaPredicted RBP13.47□□□□□ -0.25
DDX56-201ENST00000258772 MBTPS2O43462 519 aa13.47□□□□□ -0.25
DDX56-201ENST00000258772 CDC14BO60729 498 aa13.47□□□□□ -0.25
DDX56-201ENST00000258772 CRHP06850 196 aa13.47□□□□□ -0.25
DDX56-201ENST00000258772 CTRB1P17538 263 aa13.47□□□□□ -0.25
DDX56-201ENST00000258772 ANOS1P23352 680 aa13.47□□□□□ -0.25
DDX56-201ENST00000258772 PSMB6P28072 239 aa13.47□□□□□ -0.25
DDX56-201ENST00000258772 OR3A4PP47883 348 aa13.47□□□□□ -0.25
DDX56-201ENST00000258772 AFF3P51826 1226 aaKnown RBP13.47□□□□□ -0.25
DDX56-201ENST00000258772 TMEM50BP56557 158 aa13.47□□□□□ -0.25
DDX56-201ENST00000258772 TAS2R31P59538 309 aa13.47□□□□□ -0.25
DDX56-201ENST00000258772 PPIAP62937 165 aaKnown RBP13.47□□□□□ -0.25
DDX56-201ENST00000258772 CTRB2Q6GPI1 263 aa13.47□□□□□ -0.25
DDX56-201ENST00000258772 NAA40Q86UY6 237 aa13.47□□□□□ -0.25
DDX56-201ENST00000258772 OR5B2Q96R09 309 aa13.47□□□□□ -0.25
DDX56-201ENST00000258772 PHF7Q9BWX1 381 aaPredicted RBP13.47□□□□□ -0.25
DDX56-201ENST00000258772 BANF2Q9H503 90 aa13.47□□□□□ -0.25
DDX56-201ENST00000258772 CHMP1AQ9HD42 196 aaPredicted RBP13.47□□□□□ -0.25
DDX56-201ENST00000258772 MYOTQ9UBF9 498 aa13.47□□□□□ -0.25
DDX56-201ENST00000258772 ANAPC10Q9UM13 185 aa13.47□□□□□ -0.25
DDX56-201ENST00000258772 C13orf42A0A1B0GVH6 325 aa13.47□□□□□ -0.25
DDX56-201ENST00000258772 TOX3O15405 576 aaPredicted RBP13.47□□□□□ -0.25
DDX56-201ENST00000258772 OR2J2O76002 312 aa13.47□□□□□ -0.25
DDX56-201ENST00000258772 HIST1H1DP16402 221 aaKnown RBP13.47□□□□□ -0.25
DDX56-201ENST00000258772 SERPINF1P36955 418 aa13.47□□□□□ -0.25
DDX56-201ENST00000258772 SMAD4Q13485 552 aaKnown RBP13.47□□□□□ -0.25
DDX56-201ENST00000258772 TMEM17Q86X19 198 aa13.47□□□□□ -0.25
DDX56-201ENST00000258772 TMEM185AQ8NFB2 350 aa13.47□□□□□ -0.25
DDX56-201ENST00000258772 OR6X1Q8NH79 312 aa13.47□□□□□ -0.25
DDX56-201ENST00000258772 DNASE2BQ8WZ79 361 aa13.47□□□□□ -0.25
DDX56-201ENST00000258772 FAM71F1Q96KD3 344 aaPredicted RBP13.47□□□□□ -0.25
DDX56-201ENST00000258772 OR6C1Q96RD1 312 aa13.47□□□□□ -0.25
DDX56-201ENST00000258772 PNRC2Q9NPJ4 139 aaKnown RBP13.47□□□□□ -0.25
DDX56-201ENST00000258772 ZC4H2Q9NQZ6 224 aa13.47□□□□□ -0.25
DDX56-201ENST00000258772 GPR132Q9UNW8 380 aa13.47□□□□□ -0.25
DDX56-201ENST00000258772 B3GALT1Q9Y5Z6 326 aa13.47□□□□□ -0.25
DDX56-201ENST00000258772 EML6Q6ZMW3 1958 aa13.47□□□□□ -0.25
DDX56-201ENST00000258772 MYO7BQ6PIF6 2116 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms