RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 ARL4DP49703 201 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 CLDN12P56749 244 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 FBXW4P57775 412 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 DCAF7P61962 342 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 WDR5P61964 334 aaKnown RBP6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 CACNG1Q06432 222 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 UNC50Q53HI1 259 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 PTOV1Q86YD1 416 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 HIST3H2BBQ8N257 126 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 FAM86B1Q8N7N1 296 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 OR4C15Q8NGM1 316 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 SMIM4Q8WVI0 70 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 PLD4Q96BZ4 506 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 P2RY11Q96G91 374 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 SUSD3Q96L08 255 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 REG4Q9BYZ8 158 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 CYSLTR2Q9NS75 346 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 CCL27Q9Y4X3 112 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 SLX4Q8IY92 1834 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 TRAV26-1A0A087WT03 109 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 SLC22A31A6NKX4 558 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 ACKR3P25106 362 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 GRB2P62993 217 aaKnown RBP6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 MGAT2Q10469 447 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 FZD5Q13467 585 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 RNASEKQ6P5S7 137 aaKnown RBP6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 PODNL1Q6PEZ8 512 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 FAM129CQ86XR2 697 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 ZNF485Q8NCK3 441 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 KCNE5Q9UJ90 142 aa6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 ERRFI1Q9UJM3 462 aaPredicted RBP6.13□□□□□ -1.43
PDGFRA-201ENST00000257290 H3BQ15 152 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 XRCC3O43542 346 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 EPHX1P07099 455 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 RHOQP17081 205 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 NPY4RP50391 375 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 SRSF4Q08170 494 aaKnown RBP6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 ADIPOQQ15848 244 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 PAGE3Q5JUK9 113 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 C6orf136Q5SQH8 315 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 ZNF678Q5SXM1 525 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 WBP2NLQ6ICG8 309 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 ZNF788Q6ZQV5 615 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 ZNF664Q8N3J9 261 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 LMO3Q8TAP4 145 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 TMEM174Q8WUU8 243 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 TSLPQ969D9 159 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 FCRL2Q96LA5 508 aaPredicted RBP6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 HSPB9Q9BQS6 159 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 CPEB1Q9BZB8 566 aaKnown RBP6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 SLC39A8Q9C0K1 460 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 FBXL17Q9UF56 701 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 F5H5K5 113 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 TBL1XO60907 577 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 GPR32O75388 356 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 CA1P00915 261 aaPredicted RBP6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 ADH4P08319 380 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 LMO2P25791 158 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 SEMG2Q02383 582 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 HSPB3Q12988 150 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 PRSS36Q5K4E3 855 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 LYPLAL1Q5VWZ2 237 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 C17orf99Q6UX52 265 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 ZNF687Q8N1G0 1237 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 OR13C8Q8NGS7 320 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 ATP5SQ99766 215 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 KLRF1Q9NZS2 232 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 DHDHQ9UQ10 334 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 BACE2Q9Y5Z0 518 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 HSPB2A8KAH6 182 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 CLDN11O75508 207 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 SUMO3P55854 103 aaPredicted RBP6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 UBE2MP61081 183 aaKnown RBP6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 POLR2LP62875 67 aaKnown RBP6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 SLC10A2Q12908 348 aaPredicted RBP6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 HSPB2Q16082 182 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 RPL7L1Q6DKI1 246 aaKnown RBP6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 TMEM156Q8N614 296 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 IL22RA1Q8N6P7 574 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 CHST14Q8NCH0 376 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 OR6K6Q8NGW6 343 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 LGALS14Q8TCE9 139 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 RNF128Q8TEB7 428 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 WNT2BQ93097 391 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 LOXL4Q96JB6 756 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 RHBDD3Q9Y3P4 386 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 V9GY05 133 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 UBR3Q6ZT12 1888 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 TMEM265A0A087WTH1 108 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 NDUFB6O95139 128 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 SDHBP21912 280 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 GABRA3P34903 492 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 NAAAQ02083 359 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 NHLRC1Q6VVB1 395 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 AMER3Q8N944 861 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 OR10G3Q8NGC4 313 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 ASB10Q8WXI3 467 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 SMPDL3BQ92485 455 aa6.12□□□□□ -1.43
PDGFRA-201ENST00000257290 GNPNAT1Q96EK6 184 aaPredicted RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms