RNA–Protein interactions for RNA: ENST00000253363.10

RBM39-201, Transcript of RNA binding motif protein 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RBM39, Length 2,488 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-201ENST00000253363 HMGCS1Q01581 520 aa3.17□□□□□ -1.9
RBM39-201ENST00000253363 ARL6IP1Q15041 203 aa3.17□□□□□ -1.9
RBM39-201ENST00000253363 KCTD19Q17RG1 926 aaPredicted RBP3.17□□□□□ -1.9
RBM39-201ENST00000253363 CTU2Q2VPK5 515 aaKnown RBP3.17□□□□□ -1.9
RBM39-201ENST00000253363 KRTAP21-3Q3LHN1 58 aa3.17□□□□□ -1.9
RBM39-201ENST00000253363 EIPR1Q53HC9 387 aa3.17□□□□□ -1.9
RBM39-201ENST00000253363 C6orf226Q5I0X4 101 aa3.17□□□□□ -1.9
RBM39-201ENST00000253363 C6orf141Q5SZD1 244 aa3.17□□□□□ -1.9
RBM39-201ENST00000253363 CPTPQ5TA50 214 aa3.17□□□□□ -1.9
RBM39-201ENST00000253363 HACD4Q5VWC8 232 aa3.17□□□□□ -1.9
RBM39-201ENST00000253363 REEP3Q6NUK4 255 aa3.17□□□□□ -1.9
RBM39-201ENST00000253363 MFSD12Q6NUT3 480 aa3.17□□□□□ -1.9
RBM39-201ENST00000253363 MRPL21Q7Z2W9 205 aaKnown RBP3.17□□□□□ -1.9
RBM39-201ENST00000253363 SERPINA11Q86U17 422 aa3.17□□□□□ -1.9
RBM39-201ENST00000253363 P2RY8Q86VZ1 359 aa3.17□□□□□ -1.9
RBM39-201ENST00000253363 ANKRD46Q86W74 232 aa3.17□□□□□ -1.9
RBM39-201ENST00000253363 UEVLDQ8IX04 471 aa3.17□□□□□ -1.9
RBM39-201ENST00000253363 ENTHD1Q8IYW4 607 aa3.17□□□□□ -1.9
RBM39-201ENST00000253363 OR10G3Q8NGC4 313 aa3.17□□□□□ -1.9
RBM39-201ENST00000253363 OR1L6Q8NGR2 347 aa3.17□□□□□ -1.9
RBM39-201ENST00000253363 TCP10LQ8TDR4 215 aa3.17□□□□□ -1.9
RBM39-201ENST00000253363 POP5Q969H6 163 aaKnown RBP3.17□□□□□ -1.9
RBM39-201ENST00000253363 CPNE4Q96A23 557 aaPredicted RBP3.17□□□□□ -1.9
RBM39-201ENST00000253363 ZNF503Q96F45 646 aa3.17□□□□□ -1.9
RBM39-201ENST00000253363 CNRIP1Q96F85 164 aaPredicted RBP3.17□□□□□ -1.9
RBM39-201ENST00000253363 GMPPAQ96IJ6 420 aaPredicted RBP3.17□□□□□ -1.9
RBM39-201ENST00000253363 TSC22D3Q99576 134 aa3.17□□□□□ -1.9
RBM39-201ENST00000253363 PRRT1Q99946 306 aa3.17□□□□□ -1.9
RBM39-201ENST00000253363 POLR2J2Q9GZM3 115 aaKnown RBP3.17□□□□□ -1.9
RBM39-201ENST00000253363 POLR2J3Q9H1A7 115 aaKnown RBP3.17□□□□□ -1.9
RBM39-201ENST00000253363 KLK15Q9H2R5 256 aa3.17□□□□□ -1.9
RBM39-201ENST00000253363 DNAJC4Q9NNZ3 241 aa3.17□□□□□ -1.9
RBM39-201ENST00000253363 ZNF226Q9NYT6 803 aa3.17□□□□□ -1.9
RBM39-201ENST00000253363 EMCNQ9ULC0 261 aa3.17□□□□□ -1.9
RBM39-201ENST00000253363 RNF6Q9Y252 685 aa3.17□□□□□ -1.9
RBM39-201ENST00000253363 USH1CQ9Y6N9 552 aa3.17□□□□□ -1.9
RBM39-201ENST00000253363 IGF2RP11717 2491 aa3.17□□□□□ -1.9
RBM39-201ENST00000253363 WDFY4Q6ZS81 3184 aa3.17□□□□□ -1.9
RBM39-201ENST00000253363 PRSS46E5RG02 174 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 CFLARO15519 480 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 AIREO43918 545 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 SSX4O60224 188 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 FADS1O60427 444 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 CDC40O60508 579 aaKnown RBP eCLIP3.16□□□□□ -1.9
RBM39-201ENST00000253363 ZG16O60844 167 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 FZD7O75084 574 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 SS18L1O75177 396 aaPredicted RBP3.16□□□□□ -1.9
RBM39-201ENST00000253363 REM1O75628 298 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 SC5DO75845 299 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 TOXO94900 526 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 STATHP02808 62 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 PGCP20142 388 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 PMCHP20382 165 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 EFNA1P20827 205 aaPredicted RBP3.16□□□□□ -1.9
RBM39-201ENST00000253363 GLRA1P23415 457 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 MAGEA5P43359 124 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 IER3P46695 156 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 GAS1P54826 345 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 ABCE1P61221 599 aaKnown RBP3.16□□□□□ -1.9
RBM39-201ENST00000253363 ARF6P62330 175 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 TFF3Q07654 80 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 ZNF141Q15928 474 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 AGKQ53H12 422 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 ALG10Q5BKT4 473 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 TNFAIP8L3Q5GJ75 292 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 ALG10BQ5I7T1 473 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 DEF8Q6ZN54 512 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 IDO2Q6ZQW0 420 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 P4HA3Q7Z4N8 544 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 IGFN1Q86VF2 1251 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 FGFRL1Q8N441 504 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 SPATA6LQ8N4H0 392 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 COX18Q8N8Q8 333 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 BOLLQ8N9W6 283 aaKnown RBP3.16□□□□□ -1.9
RBM39-201ENST00000253363 SLC37A3Q8NCC5 494 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 PAPD5Q8NDF8 572 aaKnown RBP3.16□□□□□ -1.9
RBM39-201ENST00000253363 OR2M3Q8NG83 312 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 OR51G2Q8NGK0 314 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 OSR1Q8TAX0 266 aaPredicted RBP3.16□□□□□ -1.9
RBM39-201ENST00000253363 C22orf15Q8WYQ4 148 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 EXOSC8Q96B26 276 aaKnown RBP3.16□□□□□ -1.9
RBM39-201ENST00000253363 SLC35G5Q96KT7 338 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 CCDC115Q96NT0 180 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 MS4A10Q96PG2 267 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 NICN1Q9BSH3 213 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 UGT2B28Q9BY64 529 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 NXF5Q9H1B4 397 aaKnown RBP3.16□□□□□ -1.9
RBM39-201ENST00000253363 CXXC4Q9H2H0 198 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 DEPPQ9NTK1 212 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 KLHL13Q9P2N7 655 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 P2RX2Q9UBL9 471 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 PPP1R3CQ9UQK1 317 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 CSAG2Q9Y5P2 127 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 CEP295Q9C0D2 2601 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 FER1L5A0AVI2 2057 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 CACNA1GO43497 2377 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 A0A0G2JN53 185 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 ATP6AP2A0A1C7CYW4 349 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 A0A1W2PNV4 684 aa3.16□□□□□ -1.9
RBM39-201ENST00000253363 GMNCA6NCL1 334 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms