RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 BCDIN3DQ7Z5W3 292 aaKnown RBP19.3■□□□□ 0.68
LSM4-201ENST00000252816 DVL3Q92997 716 aaPredicted RBP19.3■□□□□ 0.68
LSM4-201ENST00000252816 CIB1Q99828 191 aa19.3■□□□□ 0.68
LSM4-201ENST00000252816 BRD7Q9NPI1 651 aa19.3■□□□□ 0.68
LSM4-201ENST00000252816 MRPL15Q9P015 296 aaKnown RBP19.3■□□□□ 0.68
LSM4-201ENST00000252816 IFNL4K9M1U5 179 aa19.29■□□□□ 0.68
LSM4-201ENST00000252816 APOC1P02654 83 aa19.29■□□□□ 0.68
LSM4-201ENST00000252816 ALOX5APP20292 161 aa19.29■□□□□ 0.68
LSM4-201ENST00000252816 RAD23AP54725 363 aa19.29■□□□□ 0.68
LSM4-201ENST00000252816 ACTR3P61158 418 aa19.29■□□□□ 0.68
LSM4-201ENST00000252816 FAM3AP98173 230 aa19.29■□□□□ 0.68
LSM4-201ENST00000252816 OR8G1Q15617 311 aa19.29■□□□□ 0.68
LSM4-201ENST00000252816 PRAMEF6Q5VXH4 476 aa19.29■□□□□ 0.68
LSM4-201ENST00000252816 LRRN1Q6UXK5 716 aa19.29■□□□□ 0.68
LSM4-201ENST00000252816 SLC16A9Q7RTY1 509 aa19.29■□□□□ 0.68
LSM4-201ENST00000252816 SPICQ8N5J4 248 aa19.29■□□□□ 0.68
LSM4-201ENST00000252816 CELF2-AS1Q8N7Q2 184 aa19.29■□□□□ 0.68
LSM4-201ENST00000252816 REEP6Q96HR9 211 aa19.29■□□□□ 0.68
LSM4-201ENST00000252816 ADAT1Q9BUB4 502 aaKnown RBP19.29■□□□□ 0.68
LSM4-201ENST00000252816 SLC22A4Q9H015 551 aa19.29■□□□□ 0.68
LSM4-201ENST00000252816 OPA3Q9H6K4 179 aa19.29■□□□□ 0.68
LSM4-201ENST00000252816 ARHGAP32A7KAX9 2087 aa19.28■□□□□ 0.68
LSM4-201ENST00000252816 SAC3D1A6NKF1 404 aa19.28■□□□□ 0.68
LSM4-201ENST00000252816 MRPL3P09001 348 aaKnown RBP19.28■□□□□ 0.68
LSM4-201ENST00000252816 ZFP36P26651 326 aaKnown RBP19.28■□□□□ 0.68
LSM4-201ENST00000252816 POLR2IP36954 125 aaKnown RBP19.28■□□□□ 0.68
LSM4-201ENST00000252816 MDH2P40926 338 aaKnown RBP19.28■□□□□ 0.68
LSM4-201ENST00000252816 MPPED2Q15777 294 aa19.28■□□□□ 0.68
LSM4-201ENST00000252816 TIGD6Q17RP2 521 aa19.28■□□□□ 0.68
LSM4-201ENST00000252816 ZNF181Q2M3W8 571 aa19.28■□□□□ 0.68
LSM4-201ENST00000252816 FAM201AQ5SY85 155 aa19.28■□□□□ 0.68
LSM4-201ENST00000252816 FAHD2BQ6P2I3 314 aaPredicted RBP19.28■□□□□ 0.68
LSM4-201ENST00000252816 TCEANCQ8N8B7 351 aa19.28■□□□□ 0.68
LSM4-201ENST00000252816 FAHD2AQ96GK7 314 aa19.28■□□□□ 0.68
LSM4-201ENST00000252816 YIPF3Q9GZM5 350 aa19.28■□□□□ 0.68
LSM4-201ENST00000252816 PATZ1Q9HBE1 687 aaKnown RBP19.28■□□□□ 0.68
LSM4-201ENST00000252816 PCDHB10Q9UN67 800 aa19.28■□□□□ 0.68
LSM4-201ENST00000252816 DNHD1Q96M86 4753 aa19.27■□□□□ 0.68
LSM4-201ENST00000252816 hCG_38984A0A1B0GV85 526 aa19.27■□□□□ 0.68
LSM4-201ENST00000252816 H3BNX3 289 aa19.27■□□□□ 0.68
LSM4-201ENST00000252816 AVPP01185 164 aa19.27■□□□□ 0.68
LSM4-201ENST00000252816 SRP14P37108 136 aaKnown RBP19.27■□□□□ 0.68
LSM4-201ENST00000252816 LCN2P80188 198 aa19.27■□□□□ 0.68
LSM4-201ENST00000252816 AADACL4Q5VUY2 407 aa19.27■□□□□ 0.68
LSM4-201ENST00000252816 C1orf229Q6ZS94 237 aaPredicted RBP19.27■□□□□ 0.68
LSM4-201ENST00000252816 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.27■□□□□ 0.68
LSM4-201ENST00000252816 KLHL36Q8N4N3 616 aa19.27■□□□□ 0.68
LSM4-201ENST00000252816 OR52H1Q8NGJ2 320 aa19.27■□□□□ 0.68
LSM4-201ENST00000252816 TMEM163Q8TC26 289 aa19.27■□□□□ 0.68
LSM4-201ENST00000252816 Q8TCH9 128 aa19.27■□□□□ 0.68
LSM4-201ENST00000252816 PGAM5Q96HS1 289 aa19.27■□□□□ 0.68
LSM4-201ENST00000252816 PKP2Q99959 881 aa19.27■□□□□ 0.68
LSM4-201ENST00000252816 PRRG3Q9BZD7 231 aa19.27■□□□□ 0.68
LSM4-201ENST00000252816 OR10A2Q9H208 303 aa19.27■□□□□ 0.68
LSM4-201ENST00000252816 SP140LQ9H930 580 aa19.27■□□□□ 0.68
LSM4-201ENST00000252816 UFSP2Q9NUQ7 469 aa19.27■□□□□ 0.68
LSM4-201ENST00000252816 LAMP5Q9UJQ1 280 aa19.27■□□□□ 0.68
LSM4-201ENST00000252816 NOP16Q9Y3C1 178 aaKnown RBP19.27■□□□□ 0.68
LSM4-201ENST00000252816 WNK2Q9Y3S1 2297 aa19.27■□□□□ 0.68
LSM4-201ENST00000252816 PRR32B1ATL7 298 aa19.26■□□□□ 0.67
LSM4-201ENST00000252816 F5H0A9 414 aaPredicted RBP19.26■□□□□ 0.67
LSM4-201ENST00000252816 GMDSO60547 372 aa19.26■□□□□ 0.67
LSM4-201ENST00000252816 PTBP3O95758 552 aaKnown RBP19.26■□□□□ 0.67
LSM4-201ENST00000252816 PNPP00491 289 aa19.26■□□□□ 0.67
LSM4-201ENST00000252816 THBS2P35442 1172 aa19.26■□□□□ 0.67
LSM4-201ENST00000252816 SEC61A1P61619 476 aaKnown RBP19.26■□□□□ 0.67
LSM4-201ENST00000252816 LCN1P1Q5VSP4 162 aa19.26■□□□□ 0.67
LSM4-201ENST00000252816 IL4I1Q96RQ9 567 aa19.26■□□□□ 0.67
LSM4-201ENST00000252816 OSBPL10Q9BXB5 764 aa19.26■□□□□ 0.67
LSM4-201ENST00000252816 TMEM165Q9HC07 324 aa19.26■□□□□ 0.67
LSM4-201ENST00000252816 COPS3Q9UNS2 423 aa19.26■□□□□ 0.67
LSM4-201ENST00000252816 LRP12Q9Y561 859 aa19.26■□□□□ 0.67
LSM4-201ENST00000252816 LRRC30A6NM36 301 aa19.25■□□□□ 0.67
LSM4-201ENST00000252816 CEACAM18A8MTB9 384 aa19.25■□□□□ 0.67
LSM4-201ENST00000252816 PSMD9O00233 223 aa19.25■□□□□ 0.67
LSM4-201ENST00000252816 PHF1O43189 567 aaPredicted RBP19.25■□□□□ 0.67
LSM4-201ENST00000252816 FAM20BO75063 409 aa19.25■□□□□ 0.67
LSM4-201ENST00000252816 DDOSTP39656 456 aa19.25■□□□□ 0.67
LSM4-201ENST00000252816 GSK3AP49840 483 aa19.25■□□□□ 0.67
LSM4-201ENST00000252816 PSMA6P60900 246 aaKnown RBP19.25■□□□□ 0.67
LSM4-201ENST00000252816 HOXA4Q00056 320 aaPredicted RBP19.25■□□□□ 0.67
LSM4-201ENST00000252816 GFOD2Q3B7J2 385 aa19.25■□□□□ 0.67
LSM4-201ENST00000252816 MEPCEQ7L2J0 689 aaKnown RBP19.25■□□□□ 0.67
LSM4-201ENST00000252816 MUC20Q8N307 709 aaPredicted RBP19.25■□□□□ 0.67
LSM4-201ENST00000252816 ERGIC1Q969X5 290 aa19.25■□□□□ 0.67
LSM4-201ENST00000252816 GABARAPL3Q9BY60 117 aa19.25■□□□□ 0.67
LSM4-201ENST00000252816 TMPRSS13Q9BYE2 586 aa19.25■□□□□ 0.67
LSM4-201ENST00000252816 ENOPH1Q9UHY7 261 aa19.25■□□□□ 0.67
LSM4-201ENST00000252816 A0A0G2JMP0 313 aa19.24■□□□□ 0.67
LSM4-201ENST00000252816 A0A0X1KG70 313 aa19.24■□□□□ 0.67
LSM4-201ENST00000252816 EBAG9O00559 213 aa19.24■□□□□ 0.67
LSM4-201ENST00000252816 NXNL2Q5VZ03 156 aa19.24■□□□□ 0.67
LSM4-201ENST00000252816 KRT77Q7Z794 578 aa19.24■□□□□ 0.67
LSM4-201ENST00000252816 C1orf87Q8N0U7 546 aa19.24■□□□□ 0.67
LSM4-201ENST00000252816 RFLNBQ8N5W9 214 aa19.24■□□□□ 0.67
LSM4-201ENST00000252816 OR4M2Q8NGB6 313 aa19.24■□□□□ 0.67
LSM4-201ENST00000252816 CNN2Q99439 309 aaKnown RBP19.24■□□□□ 0.67
LSM4-201ENST00000252816 TMEM246Q9BRR3 403 aa19.24■□□□□ 0.67
LSM4-201ENST00000252816 RIBC2Q9H4K1 309 aa19.24■□□□□ 0.67
LSM4-201ENST00000252816 PPP1R3EQ9H7J1 279 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms