RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 OMGP23515 440 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 ZBTB25P24278 435 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 ADH6P28332 368 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 CRABP1P29762 137 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 BLVRBP30043 206 aaPredicted RBP10.66□□□□□ -0.7
USHBP1-201ENST00000252597 SLC37A1P57057 533 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 CLRN1P58418 232 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 CLINT1Q14677 625 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 MPPED2Q15777 294 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 MICBQ29980 383 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 C14orf28Q4W4Y0 310 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 TMEM244Q5VVB8 128 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 OR1M1Q8NGA1 313 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 OR5D14Q8NGL3 314 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 ASB17Q8WXJ9 295 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 SLAMF9Q96A28 289 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 REEP6Q96HR9 211 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 TMEM59Q9BXS4 323 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 SLC19A3Q9BZV2 496 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 UQCC1Q9NVA1 299 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 FBXO7Q9Y3I1 522 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 NSA2O95478 260 aaKnown RBP10.66□□□□□ -0.7
USHBP1-201ENST00000252597 OR13C7P0DN81 318 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 ABCD3P28288 659 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 RBMXP38159 391 aaKnown RBP10.66□□□□□ -0.7
USHBP1-201ENST00000252597 GUCA1AP43080 201 aaPredicted RBP10.66□□□□□ -0.7
USHBP1-201ENST00000252597 HNF4GQ14541 408 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 TSPO2Q5TGU0 170 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 OR2A2Q6IF42 318 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 Q6ZRG5 221 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 PEG10Q86TG7 708 aaKnown RBP10.66□□□□□ -0.7
USHBP1-201ENST00000252597 C11orf40Q8WZ69 217 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 PIK3IP1Q96FE7 263 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 CDC6Q99741 560 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 TXNIPQ9H3M7 391 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 TAF9BQ9HBM6 251 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 GPR84Q9NQS5 396 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 RAB22AQ9UL26 194 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 KIR2DS5A0A0G2JLQ3 304 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 A0A0G2JNG1 304 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 H0YIZ8 118 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 KIR2DS3K7RE56 304 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 EFSO43281 561 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 PPICP45877 212 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 PNLIPRP2P54317 469 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 DMWDQ09019 674 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 UNC119Q13432 240 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 KIR2DS5Q14953 304 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 PDZD11Q5EBL8 140 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 CLEC18BQ6UXF7 455 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 EXD3Q8N9H8 876 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 SUMF1Q8NBK3 374 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 OR10C1Q96KK4 312 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 CLCC1Q96S66 551 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 FAM86C1Q9NVL1 165 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 DZANK1Q9NVP4 752 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 URGCP-MRPS24S4R325 110 aa10.66□□□□□ -0.7
USHBP1-201ENST00000252597 SVILO95425 2214 aa10.65□□□□□ -0.7
USHBP1-201ENST00000252597 NUP210Q8TEM1 1887 aaPredicted RBP10.65□□□□□ -0.7
USHBP1-201ENST00000252597 IL33O95760 270 aa10.65□□□□□ -0.7
USHBP1-201ENST00000252597 ZNF735P0CB33 412 aa10.65□□□□□ -0.7
USHBP1-201ENST00000252597 PTGFRP43088 359 aa10.65□□□□□ -0.7
USHBP1-201ENST00000252597 FHITP49789 147 aa10.65□□□□□ -0.7
USHBP1-201ENST00000252597 PABPC1L2AQ5JQF8 200 aa10.65□□□□□ -0.7
USHBP1-201ENST00000252597 PRAMEF20Q5VT98 475 aa10.65□□□□□ -0.7
USHBP1-201ENST00000252597 SLC25A42Q86VD7 318 aa10.65□□□□□ -0.7
USHBP1-201ENST00000252597 CATSPERDQ86XM0 798 aa10.65□□□□□ -0.7
USHBP1-201ENST00000252597 PNLDC1Q8NA58 520 aaKnown RBP10.65□□□□□ -0.7
USHBP1-201ENST00000252597 OR5B2Q96R09 309 aa10.65□□□□□ -0.7
USHBP1-201ENST00000252597 HDHD3Q9BSH5 251 aaPredicted RBP10.65□□□□□ -0.7
USHBP1-201ENST00000252597 PBOV1Q9GZY1 135 aa10.65□□□□□ -0.7
USHBP1-201ENST00000252597 RGCCQ9H4X1 137 aa10.65□□□□□ -0.7
USHBP1-201ENST00000252597 SCPEP1Q9HB40 452 aa10.65□□□□□ -0.7
USHBP1-201ENST00000252597 ZNF275Q9NSD4 429 aaPredicted RBP10.65□□□□□ -0.7
USHBP1-201ENST00000252597 ZFP57Q9NU63 452 aa10.65□□□□□ -0.7
USHBP1-201ENST00000252597 KLHL13Q9P2N7 655 aa10.65□□□□□ -0.7
USHBP1-201ENST00000252597 PUS1Q9Y606 427 aaKnown RBP eCLIP10.65□□□□□ -0.7
USHBP1-201ENST00000252597 TTC28Q96AY4 2481 aa10.65□□□□□ -0.7
USHBP1-201ENST00000252597 hCG_1809904A0A1W2PP81 198 aa10.65□□□□□ -0.7
USHBP1-201ENST00000252597 A0A1W2PR64 198 aa10.65□□□□□ -0.7
USHBP1-201ENST00000252597 A0A1W2PRV1 198 aa10.65□□□□□ -0.7
USHBP1-201ENST00000252597 A8MVM7 634 aa10.65□□□□□ -0.7
USHBP1-201ENST00000252597 TSPAN15O95858 294 aa10.65□□□□□ -0.7
USHBP1-201ENST00000252597 GABRG2P18507 467 aa10.65□□□□□ -0.7
USHBP1-201ENST00000252597 OR1D5P58170 312 aa10.65□□□□□ -0.7
USHBP1-201ENST00000252597 FUT7Q11130 342 aa10.65□□□□□ -0.7
USHBP1-201ENST00000252597 MFAP5Q13361 173 aa10.65□□□□□ -0.7
USHBP1-201ENST00000252597 PHLDA2Q53GA4 152 aa10.65□□□□□ -0.7
USHBP1-201ENST00000252597 CPEB2Q7Z5Q1 589 aaKnown RBP10.65□□□□□ -0.7
USHBP1-201ENST00000252597 NAA40Q86UY6 237 aa10.65□□□□□ -0.7
USHBP1-201ENST00000252597 SLC22A24Q8N4F4 322 aa10.65□□□□□ -0.7
USHBP1-201ENST00000252597 MITD1Q8WV92 249 aa10.65□□□□□ -0.7
USHBP1-201ENST00000252597 C8orf44Q96CB5 159 aa10.65□□□□□ -0.7
USHBP1-201ENST00000252597 MFRPQ9BY79 579 aa10.65□□□□□ -0.7
USHBP1-201ENST00000252597 PARPBPQ9NWS1 579 aa10.65□□□□□ -0.7
USHBP1-201ENST00000252597 CTSFQ9UBX1 484 aa10.65□□□□□ -0.7
USHBP1-201ENST00000252597 ESPL1Q14674 2120 aa10.65□□□□□ -0.71
USHBP1-201ENST00000252597 STMND1H3BQB6 276 aa10.64□□□□□ -0.71
USHBP1-201ENST00000252597 ANGPTL7O43827 346 aa10.64□□□□□ -0.71
USHBP1-201ENST00000252597 SSX5O60225 188 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms