RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 RUSC1-AS1Q66K80 236 aa8.54□□□□□ -1.04
VPS50-201ENST00000251739 PGBD2Q6P3X8 592 aa8.54□□□□□ -1.04
VPS50-201ENST00000251739 PGAP1Q75T13 922 aa8.54□□□□□ -1.04
VPS50-201ENST00000251739 SDR9C7Q8NEX9 313 aa8.54□□□□□ -1.04
VPS50-201ENST00000251739 OR11L1Q8NGX0 322 aa8.54□□□□□ -1.04
VPS50-201ENST00000251739 ZNRF4Q8WWF5 429 aa8.54□□□□□ -1.04
VPS50-201ENST00000251739 SLCO4A1Q96BD0 722 aa8.54□□□□□ -1.04
VPS50-201ENST00000251739 CITED1Q99966 193 aa8.54□□□□□ -1.04
VPS50-201ENST00000251739 ADAT1Q9BUB4 502 aaKnown RBP8.54□□□□□ -1.04
VPS50-201ENST00000251739 IFT27Q9BW83 186 aa8.54□□□□□ -1.04
VPS50-201ENST00000251739 CHIAQ9BZP6 476 aa8.54□□□□□ -1.04
VPS50-201ENST00000251739 SLC22A4Q9H015 551 aa8.54□□□□□ -1.04
VPS50-201ENST00000251739 SIRPDQ9H106 197 aa8.54□□□□□ -1.04
VPS50-201ENST00000251739 FN3KQ9H479 309 aa8.54□□□□□ -1.04
VPS50-201ENST00000251739 MARCH7Q9H992 704 aa8.54□□□□□ -1.04
VPS50-201ENST00000251739 UFSP2Q9NUQ7 469 aa8.54□□□□□ -1.04
VPS50-201ENST00000251739 C1RLQ9NZP8 487 aa8.54□□□□□ -1.04
VPS50-201ENST00000251739 RNF7Q9UBF6 113 aa8.54□□□□□ -1.04
VPS50-201ENST00000251739 NOP16Q9Y3C1 178 aaKnown RBP8.54□□□□□ -1.04
VPS50-201ENST00000251739 POMT1Q9Y6A1 747 aa8.54□□□□□ -1.04
VPS50-201ENST00000251739 CENPVL3A0A0U1RRI6 287 aa8.53□□□□□ -1.04
VPS50-201ENST00000251739 P2RY10O00398 339 aa8.53□□□□□ -1.04
VPS50-201ENST00000251739 BHLHE40O14503 412 aa8.53□□□□□ -1.04
VPS50-201ENST00000251739 GADD45GO95257 159 aa8.53□□□□□ -1.04
VPS50-201ENST00000251739 HSD17B1P14061 328 aa8.53□□□□□ -1.04
VPS50-201ENST00000251739 IRF2P14316 349 aa8.53□□□□□ -1.04
VPS50-201ENST00000251739 PRDX6P30041 224 aa8.53□□□□□ -1.04
VPS50-201ENST00000251739 RPS27P42677 84 aaKnown RBP8.53□□□□□ -1.04
VPS50-201ENST00000251739 RAG2P55895 527 aa8.53□□□□□ -1.04
VPS50-201ENST00000251739 TPTEP56180 551 aa8.53□□□□□ -1.04
VPS50-201ENST00000251739 RPL15P61313 204 aaKnown RBP8.53□□□□□ -1.04
VPS50-201ENST00000251739 SPIBQ01892 262 aa8.53□□□□□ -1.04
VPS50-201ENST00000251739 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.53□□□□□ -1.04
VPS50-201ENST00000251739 TSPAN31Q12999 210 aa8.53□□□□□ -1.04
VPS50-201ENST00000251739 OR8G1Q15617 311 aa8.53□□□□□ -1.04
VPS50-201ENST00000251739 GPR157Q5UAW9 335 aa8.53□□□□□ -1.04
VPS50-201ENST00000251739 RHOUQ7L0Q8 258 aa8.53□□□□□ -1.04
VPS50-201ENST00000251739 MRPL21Q7Z2W9 205 aaKnown RBP8.53□□□□□ -1.04
VPS50-201ENST00000251739 FAM90A1Q86YD7 464 aa8.53□□□□□ -1.04
VPS50-201ENST00000251739 GCSAMQ8N6F7 178 aa8.53□□□□□ -1.04
VPS50-201ENST00000251739 RNF148Q8N7C7 305 aa8.53□□□□□ -1.04
VPS50-201ENST00000251739 OR2AJ1Q8NGZ0 328 aa8.53□□□□□ -1.04
VPS50-201ENST00000251739 OR2AE1Q8NHA4 323 aa8.53□□□□□ -1.04
VPS50-201ENST00000251739 SPRYD4Q8WW59 207 aaPredicted RBP8.53□□□□□ -1.04
VPS50-201ENST00000251739 CMTM5Q96DZ9 223 aa8.53□□□□□ -1.04
VPS50-201ENST00000251739 PYURFQ96I23 114 aa8.53□□□□□ -1.04
VPS50-201ENST00000251739 FN3KRPQ9HA64 309 aa8.53□□□□□ -1.04
VPS50-201ENST00000251739 MRPL15Q9P015 296 aaKnown RBP8.53□□□□□ -1.04
VPS50-201ENST00000251739 PDP1Q9P0J1 537 aaPredicted RBP8.53□□□□□ -1.04
VPS50-201ENST00000251739 KAAG1Q9UBP8 84 aa8.53□□□□□ -1.04
VPS50-201ENST00000251739 CD300AQ9UGN4 299 aa8.53□□□□□ -1.04
VPS50-201ENST00000251739 MAGEL2Q9UJ55 1249 aa8.53□□□□□ -1.04
VPS50-201ENST00000251739 CDH10Q9Y6N8 788 aa8.53□□□□□ -1.04
VPS50-201ENST00000251739 COMMD3-BMI1R4GMX3 469 aa8.53□□□□□ -1.04
VPS50-201ENST00000251739 OOEPA6NGQ2 149 aa8.52□□□□□ -1.05
VPS50-201ENST00000251739 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.52□□□□□ -1.05
VPS50-201ENST00000251739 ARPC2O15144 300 aa8.52□□□□□ -1.05
VPS50-201ENST00000251739 NDUFA2O43678 99 aa8.52□□□□□ -1.05
VPS50-201ENST00000251739 OR10H3O60404 316 aa8.52□□□□□ -1.05
VPS50-201ENST00000251739 FBXO24O75426 580 aa8.52□□□□□ -1.05
VPS50-201ENST00000251739 LHBP01229 141 aa8.52□□□□□ -1.05
VPS50-201ENST00000251739 LIPFP07098 398 aa8.52□□□□□ -1.05
VPS50-201ENST00000251739 PYCR1P32322 319 aa8.52□□□□□ -1.05
VPS50-201ENST00000251739 DEFA6Q01524 100 aa8.52□□□□□ -1.05
VPS50-201ENST00000251739 SRSF4Q08170 494 aaKnown RBP8.52□□□□□ -1.05
VPS50-201ENST00000251739 KRT72Q14CN4 511 aa8.52□□□□□ -1.05
VPS50-201ENST00000251739 KCNJ8Q15842 424 aa8.52□□□□□ -1.05
VPS50-201ENST00000251739 NKAPLQ5M9Q1 402 aa8.52□□□□□ -1.05
VPS50-201ENST00000251739 GLYATL3Q5SZD4 288 aa8.52□□□□□ -1.05
VPS50-201ENST00000251739 TEX36Q5VZQ5 186 aa8.52□□□□□ -1.05
VPS50-201ENST00000251739 CD276Q5ZPR3 534 aa8.52□□□□□ -1.05
VPS50-201ENST00000251739 ZNF770Q6IQ21 691 aaPredicted RBP8.52□□□□□ -1.05
VPS50-201ENST00000251739 FIP1L1Q6UN15 594 aaKnown RBP8.52□□□□□ -1.05
VPS50-201ENST00000251739 DRAM2Q6UX65 266 aa8.52□□□□□ -1.05
VPS50-201ENST00000251739 WDR86Q86TI4 376 aa8.52□□□□□ -1.05
VPS50-201ENST00000251739 LDLRAD3Q86YD5 345 aa8.52□□□□□ -1.05
VPS50-201ENST00000251739 OR8D4Q8NGM9 314 aa8.52□□□□□ -1.05
VPS50-201ENST00000251739 OR4F5Q8NH21 305 aa8.52□□□□□ -1.05
VPS50-201ENST00000251739 SSMEM1Q8WWF3 244 aa8.52□□□□□ -1.05
VPS50-201ENST00000251739 SPTSSAQ969W0 71 aa8.52□□□□□ -1.05
VPS50-201ENST00000251739 SPSB4Q96A44 273 aa8.52□□□□□ -1.05
VPS50-201ENST00000251739 FAM71F1Q96KD3 344 aaPredicted RBP8.52□□□□□ -1.05
VPS50-201ENST00000251739 WDFY2Q96P53 400 aa8.52□□□□□ -1.05
VPS50-201ENST00000251739 TECTBQ96PL2 329 aa8.52□□□□□ -1.05
VPS50-201ENST00000251739 BTBD10Q9BSF8 475 aa8.52□□□□□ -1.05
VPS50-201ENST00000251739 PCGF1Q9BSM1 259 aa8.52□□□□□ -1.05
VPS50-201ENST00000251739 NMNAT2Q9BZQ4 307 aa8.52□□□□□ -1.05
VPS50-201ENST00000251739 MMADHCQ9H3L0 296 aaPredicted RBP8.52□□□□□ -1.05
VPS50-201ENST00000251739 BEX1Q9HBH7 125 aa8.52□□□□□ -1.05
VPS50-201ENST00000251739 IL1RAPQ9NPH3 570 aa8.52□□□□□ -1.05
VPS50-201ENST00000251739 TRIM36Q9NQ86 728 aa8.52□□□□□ -1.05
VPS50-201ENST00000251739 IL20Q9NYY1 176 aa8.52□□□□□ -1.05
VPS50-201ENST00000251739 V9GYQ6 96 aa8.52□□□□□ -1.05
VPS50-201ENST00000251739 NOTCH3Q9UM47 2321 aa8.51□□□□□ -1.05
VPS50-201ENST00000251739 IGHV1-69DA0A0B4J2H0 117 aa8.51□□□□□ -1.05
VPS50-201ENST00000251739 TVP23AA6NH52 213 aa8.51□□□□□ -1.05
VPS50-201ENST00000251739 ADAM20O43506 726 aa8.51□□□□□ -1.05
VPS50-201ENST00000251739 TOX4O94842 621 aa8.51□□□□□ -1.05
VPS50-201ENST00000251739 KNG1P01042 644 aa8.51□□□□□ -1.05
VPS50-201ENST00000251739 IGHV1-69P01742 117 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms