RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 MRPL15Q9P015 296 aaKnown RBP17.54■□□□□ 0.4
NEDD8-201ENST00000250495 MGAM2Q2M2H8 2515 aa17.54■□□□□ 0.4
NEDD8-201ENST00000250495 LGALS8O00214 317 aa17.53■□□□□ 0.4
NEDD8-201ENST00000250495 NDUFA2O43678 99 aa17.53■□□□□ 0.4
NEDD8-201ENST00000250495 CCNB2O95067 398 aa17.53■□□□□ 0.4
NEDD8-201ENST00000250495 GASTP01350 101 aa17.53■□□□□ 0.4
NEDD8-201ENST00000250495 LIPFP07098 398 aa17.53■□□□□ 0.4
NEDD8-201ENST00000250495 FGF12P61328 243 aa17.53■□□□□ 0.4
NEDD8-201ENST00000250495 GPR157Q5UAW9 335 aa17.53■□□□□ 0.4
NEDD8-201ENST00000250495 SLC37A3Q8NCC5 494 aa17.53■□□□□ 0.4
NEDD8-201ENST00000250495 OR51L1Q8NGJ5 315 aa17.53■□□□□ 0.4
NEDD8-201ENST00000250495 OR2AE1Q8NHA4 323 aa17.53■□□□□ 0.4
NEDD8-201ENST00000250495 ZNRF4Q8WWF5 429 aa17.53■□□□□ 0.4
NEDD8-201ENST00000250495 ZDHHC16Q969W1 377 aa17.53■□□□□ 0.4
NEDD8-201ENST00000250495 KCNJ15Q99712 375 aa17.53■□□□□ 0.4
NEDD8-201ENST00000250495 MMADHCQ9H3L0 296 aaPredicted RBP17.53■□□□□ 0.4
NEDD8-201ENST00000250495 OPA3Q9H6K4 179 aa17.53■□□□□ 0.4
NEDD8-201ENST00000250495 BAIAP2Q9UQB8 552 aa17.53■□□□□ 0.4
NEDD8-201ENST00000250495 SOX21Q9Y651 276 aaPredicted RBP17.53■□□□□ 0.4
NEDD8-201ENST00000250495 TRAV38-1A0A0B4J264 116 aa17.52■□□□□ 0.4
NEDD8-201ENST00000250495 ENTPD1P49961 510 aa17.52■□□□□ 0.4
NEDD8-201ENST00000250495 PRKXP51817 358 aa17.52■□□□□ 0.4
NEDD8-201ENST00000250495 MNAT1P51948 309 aa17.52■□□□□ 0.4
NEDD8-201ENST00000250495 OR8B8Q15620 311 aa17.52■□□□□ 0.4
NEDD8-201ENST00000250495 GLYATL3Q5SZD4 288 aa17.52■□□□□ 0.4
NEDD8-201ENST00000250495 SFRP4Q6FHJ7 346 aaPredicted RBP17.52■□□□□ 0.4
NEDD8-201ENST00000250495 CYP2R1Q6VVX0 501 aa17.52■□□□□ 0.4
NEDD8-201ENST00000250495 LNX2Q8N448 690 aa17.52■□□□□ 0.4
NEDD8-201ENST00000250495 BOLLQ8N9W6 283 aaKnown RBP17.52■□□□□ 0.4
NEDD8-201ENST00000250495 TECTBQ96PL2 329 aa17.52■□□□□ 0.4
NEDD8-201ENST00000250495 TSSK6Q9BXA6 273 aa17.52■□□□□ 0.4
NEDD8-201ENST00000250495 PRDM13Q9H4Q3 707 aa17.52■□□□□ 0.4
NEDD8-201ENST00000250495 CENPMQ9NSP4 180 aa17.52■□□□□ 0.4
NEDD8-201ENST00000250495 TBC1D23Q9NUY8 699 aa17.52■□□□□ 0.4
NEDD8-201ENST00000250495 ACTR3BQ9P1U1 418 aa17.52■□□□□ 0.4
NEDD8-201ENST00000250495 KIF17Q9P2E2 1029 aa17.52■□□□□ 0.4
NEDD8-201ENST00000250495 COMMD3-BMI1R4GMX3 469 aa17.52■□□□□ 0.4
NEDD8-201ENST00000250495 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.51■□□□□ 0.39
NEDD8-201ENST00000250495 C22orf46C9J442 243 aa17.51■□□□□ 0.39
NEDD8-201ENST00000250495 ZNF593O00488 134 aaPredicted RBP17.51■□□□□ 0.39
NEDD8-201ENST00000250495 SPARCP09486 303 aa17.51■□□□□ 0.39
NEDD8-201ENST00000250495 DDOSTP39656 456 aa17.51■□□□□ 0.39
NEDD8-201ENST00000250495 BLVRAP53004 296 aa17.51■□□□□ 0.39
NEDD8-201ENST00000250495 PCK2Q16822 640 aa17.51■□□□□ 0.39
NEDD8-201ENST00000250495 TEX30Q5JUR7 227 aa17.51■□□□□ 0.39
NEDD8-201ENST00000250495 ZNF770Q6IQ21 691 aaPredicted RBP17.51■□□□□ 0.39
NEDD8-201ENST00000250495 OR8D4Q8NGM9 314 aa17.51■□□□□ 0.39
NEDD8-201ENST00000250495 OR9Q1Q8NGQ5 310 aa17.51■□□□□ 0.39
NEDD8-201ENST00000250495 SLAMF6Q96DU3 332 aa17.51■□□□□ 0.39
NEDD8-201ENST00000250495 C14orf119Q9NWQ9 140 aa17.51■□□□□ 0.39
NEDD8-201ENST00000250495 N6AMT1Q9Y5N5 214 aa17.51■□□□□ 0.39
NEDD8-201ENST00000250495 OOEPA6NGQ2 149 aa17.5■□□□□ 0.39
NEDD8-201ENST00000250495 C3orf80F5H4A9 247 aa17.5■□□□□ 0.39
NEDD8-201ENST00000250495 P2RY10O00398 339 aa17.5■□□□□ 0.39
NEDD8-201ENST00000250495 ADAM20O43506 726 aa17.5■□□□□ 0.39
NEDD8-201ENST00000250495 XRCC2O43543 280 aa17.5■□□□□ 0.39
NEDD8-201ENST00000250495 GRPP07492 148 aa17.5■□□□□ 0.39
NEDD8-201ENST00000250495 MAGEA2P43356 314 aa17.5■□□□□ 0.39
NEDD8-201ENST00000250495 SLC15A1P46059 708 aa17.5■□□□□ 0.39
NEDD8-201ENST00000250495 SLC25A1P53007 311 aa17.5■□□□□ 0.39
NEDD8-201ENST00000250495 DEFB112Q30KQ8 113 aa17.5■□□□□ 0.39
NEDD8-201ENST00000250495 LYPD4Q6UWN0 246 aa17.5■□□□□ 0.39
NEDD8-201ENST00000250495 BRD3OSQ6XYD6 125 aa17.5■□□□□ 0.39
NEDD8-201ENST00000250495 ZNF511Q8NB15 262 aa17.5■□□□□ 0.39
NEDD8-201ENST00000250495 AQP11Q8NBQ7 271 aa17.5■□□□□ 0.39
NEDD8-201ENST00000250495 PCGF1Q9BSM1 259 aa17.5■□□□□ 0.39
NEDD8-201ENST00000250495 SLITRK2Q9H156 845 aa17.5■□□□□ 0.39
NEDD8-201ENST00000250495 SP140LQ9H930 580 aa17.5■□□□□ 0.39
NEDD8-201ENST00000250495 NOX4Q9NPH5 578 aa17.5■□□□□ 0.39
NEDD8-201ENST00000250495 C1orf123Q9NWV4 160 aa17.5■□□□□ 0.39
NEDD8-201ENST00000250495 ZNF879B4DU55 563 aa17.49■□□□□ 0.39
NEDD8-201ENST00000250495 ZNF878C9JN71 531 aa17.49■□□□□ 0.39
NEDD8-201ENST00000250495 TNFRSF13BO14836 293 aaPredicted RBP17.49■□□□□ 0.39
NEDD8-201ENST00000250495 HOXA3O43365 443 aaPredicted RBP17.49■□□□□ 0.39
NEDD8-201ENST00000250495 IFNGP01579 166 aa17.49■□□□□ 0.39
NEDD8-201ENST00000250495 CRMP1Q14194 572 aa17.49■□□□□ 0.39
NEDD8-201ENST00000250495 SPATC1Q76KD6 591 aa17.49■□□□□ 0.39
NEDD8-201ENST00000250495 ARHGAP24Q8N264 748 aa17.49■□□□□ 0.39
NEDD8-201ENST00000250495 PNLDC1Q8NA58 520 aaKnown RBP17.49■□□□□ 0.39
NEDD8-201ENST00000250495 OR2T33Q8NG76 320 aa17.49■□□□□ 0.39
NEDD8-201ENST00000250495 OR56B2PQ8NGI1 322 aa17.49■□□□□ 0.39
NEDD8-201ENST00000250495 TMIGD2Q96BF3 282 aa17.49■□□□□ 0.39
NEDD8-201ENST00000250495 NMNAT2Q9BZQ4 307 aa17.49■□□□□ 0.39
NEDD8-201ENST00000250495 C1orf21Q9H246 121 aa17.49■□□□□ 0.39
NEDD8-201ENST00000250495 MAGIXQ9H6Y5 334 aa17.49■□□□□ 0.39
NEDD8-201ENST00000250495 CTSZQ9UBR2 303 aa17.49■□□□□ 0.39
NEDD8-201ENST00000250495 MDFIC2A0A1B0GVS7 189 aa17.48■□□□□ 0.39
NEDD8-201ENST00000250495 C5orf63A6NC05 138 aa17.48■□□□□ 0.39
NEDD8-201ENST00000250495 A6NLC8 198 aa17.48■□□□□ 0.39
NEDD8-201ENST00000250495 ANKRD30BLA7E2S9 258 aa17.48■□□□□ 0.39
NEDD8-201ENST00000250495 SRRM5B3KS81 715 aa17.48■□□□□ 0.39
NEDD8-201ENST00000250495 WIPF1O43516 503 aa17.48■□□□□ 0.39
NEDD8-201ENST00000250495 TOX4O94842 621 aa17.48■□□□□ 0.39
NEDD8-201ENST00000250495 GYPBP06028 91 aa17.48■□□□□ 0.39
NEDD8-201ENST00000250495 SLC2A1P11166 492 aa17.48■□□□□ 0.39
NEDD8-201ENST00000250495 PSKH1P11801 424 aa17.48■□□□□ 0.39
NEDD8-201ENST00000250495 SPI1P17947 270 aa17.48■□□□□ 0.39
NEDD8-201ENST00000250495 CFHR2P36980 270 aa17.48■□□□□ 0.39
NEDD8-201ENST00000250495 GRB2P62993 217 aaKnown RBP17.48■□□□□ 0.39
NEDD8-201ENST00000250495 HOXA4Q00056 320 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms